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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7386 cluster # 7386       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7386#0 length = 798 sequences # 4  

consensusID : consensus_7386#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 798
fasta sequence
                              [GACACTGACTGGACTGAAGGAGTAGAAACATATCCGAGCTCTACGAGCTCTCTCTTCTCTCTCCACCATGACCGGCCACCACTAAGTCCCGGCCGATCTCCTCCCCTACAGCTCCACTTCTCGAATCCTTGCACCACTAGTCTCTCTTCACTCCGGCGAATCCATTTTGTCCATTTCCCCCTTCTCTCTCCCTCCAAACTAAGCCACCACCATTACCACCTTAGCCGGCCGAAGGTGAGCTCGTGTTGCCGCTGTTCCGGCTAACTCACCCTTCCTCTCTCCCAGCCACCACCCTCCCCGGGTGCGCGTTGCTCGGGAACACGTTCCGCCACCGACGTCGCCGTCCCCCATCCACTGGAGCACCGGCGTCCCTCTCTCCCTCTCCTCTCGTTTACTCGGCTGAAAAAGAAGAAGGAAGATACGGGAGGAAGAAGAAGAGAAAGAAAAAGAAAAGAAAACAAACACTGACAGTAGAGTCTATTATCTTTTGGATGGCAACCTGTGGTATTTCGAGGATCGGATAATCAGGTTGCTTATCTTGAATTTATTTGCGTTGGAGCAAGAGTTAATTTGGAATTCTTGCCGAAGCCGGGAGTTCAATTATATAAGTCAGTCTTATATAAGTTAGTCTCATCTCAACCTAATTCGCAAATATAGATTAGATAGATGGTTTAAGTCTATAGCCAAACATTAGGGTCAAGTCATTCTATAGCTTCTGTTGTAATAGTTAGCCACAACCTTGTAAATACCCTATTATATCACATAAAGAAGTCTCCTTTGGAGCCTTGATCAAAAAAA]

[+] EMBL CF320244             [GACACTGACTGGACTGAAGGAGTAGAAACATATCCGAGCTCTACGAGCTCTCTCTTCTCTCTCCACCATGACCGGCCACCACTAAGTCCCGGCCGATCTCCTCCCCTACAGCTCCACTTCTCGAATCCTTGCACCACTAGTCTCTCTTCACTCCGGCGAATCCATTTTGTCCATTTCCCCCTTCTCTCTCCCTCCAAACTAAGCCACCACCATTACCACCTTAGCCGGCCGAAGGTGAGCTCGTGTTGCCGCTGTTCCGGCTAACTCACCCTTCCTCTCTCCCAGCCACCACCCTCCCCGGGTGCGCGTTGCTCGGGAACACGTTCCGCCACCGACGTCGCCGTCCCCCATCCACTGGAGCACCGGCGTCCCTCTCTCCCTCTCCTCTCGTTTACTCGGCTGAAAAAGAAGAAGGAAGATACGGGAGGAAGAAGAAGAGAAAGAAAAAGAAAAGAAAACAAACACTGACAGTAGAGTCTATTATCTTTTGGATGGCAACCTGTGGTATTTCGAGGATCGGATAATCAGGTTGCTTATCTTGAATTTATTTGCGTTGGAGCAAGAGTTAATTTGGAATTCTTGCCGAAGCCGGGAGTTCAATTATATAAGTCAGTCTTATATAAGTTAGTCTCATCTCA                                                                                                                                                                ]
[+] EMBL CF314391             [                                    AGCTCTACGAGCTCTCTCTTCTCTCTCCACCATGACCGGCCACCACTAAGTCCCGGCCGATCTCCTCCCCTACAGCTCCACTTCTCGAATCCTTGCACCACTAGTCTCTCTTCACTCCGGCGAATCCATTTTGTCCATTTCCCCCTTCTCTCTCCCTCCAAACTAAGCCACCACCATTACCACCTTAGCCGGCCGAAGGTGAGCTCGTGTTGCCGCTGTTCCGGCTAACTCACCCTTCCTCTCTCCCAGCCACCACCCTCCCCGGGTGCGCGTTGCTCGGGAACACGTTCCGCCACCGACGTCGCCGTCCCCCATCCACTGGAGCACCGGCGTCCCTCTCTCCCTCTCCTCTCGTTTACTCGGCTGAAAAAGAAGAAGGAAGATACGGGAGGAAGAAGAAGAGAAAGAAAAAGAAAAGAAAACAAACACTGACAGTAGAGTCTATTATCTTTTGG                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF320245             [                                                                                                                                                                                                                                                                                                    CCTCCCCGGGTGCGCGTTGCTCGGGAACACGTTCCGCCACCGACGTCGCCGTCCCCCATCCACTGGAGCACCGGCGTCCCTCTCTCCCTCTCCTCTCGTTTACTCGGCTGAAAAAGAAGAAGGAAGATACGGGAGGAAGAAGAAGAGAAAGAAAAAGAAAAGAAAACAAACACTGACAGTAGAGTCTATTATCTTTTGGATGGCAACCTGTGGTATTTCGAGGATCGGATAATCAGGTTGCTTATCTTGAATTTATTTGCGTTGGAGCAAGAGTTAATTTGGAATTCTTGCCGAAGCCGGGAGTTCAATTATATAAGTTAGTCTTATATAAGTTAGTCTCATCTCAACCTAATTCGCAAATATAGATTAGATAGATGGTTTAAGTCTATAGCCAAACATTAGGGTCAAGTCATTCTATAGCTTCTGTTGTAATAGTTAGCCACAACCTTGTAAATACCCTATTATATCACATAAAGAAGTCTCCTTTGGAGCCTTGATCAAAAAAA]
[-] EMBL CF314390             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGTCTCATCTCAACCTAATTCGCAAATATAGATTAGATAGATGGTTTAAGTCTATAGCCAAACATTAGGGTCAAGTCATTCTATAGCTTCTGTTGTAATAGTTAGCCACAACCTTGTAAATACCCTATTATATCACAAAAA                               ]


>consensus_7386#0 GACACTGACTGGACTGAAGGAGTAGAAACATATCCGAGCTCTACGAGCTCTCTCTTCTCT CTCCACCATGACCGGCCACCACTAAGTCCCGGCCGATCTCCTCCCCTACAGCTCCACTTC TCGAATCCTTGCACCACTAGTCTCTCTTCACTCCGGCGAATCCATTTTGTCCATTTCCCC CTTCTCTCTCCCTCCAAACTAAGCCACCACCATTACCACCTTAGCCGGCCGAAGGTGAGC TCGTGTTGCCGCTGTTCCGGCTAACTCACCCTTCCTCTCTCCCAGCCACCACCCTCCCCG GGTGCGCGTTGCTCGGGAACACGTTCCGCCACCGACGTCGCCGTCCCCCATCCACTGGAG CACCGGCGTCCCTCTCTCCCTCTCCTCTCGTTTACTCGGCTGAAAAAGAAGAAGGAAGAT ACGGGAGGAAGAAGAAGAGAAAGAAAAAGAAAAGAAAACAAACACTGACAGTAGAGTCTA TTATCTTTTGGATGGCAACCTGTGGTATTTCGAGGATCGGATAATCAGGTTGCTTATCTT GAATTTATTTGCGTTGGAGCAAGAGTTAATTTGGAATTCTTGCCGAAGCCGGGAGTTCAA TTATATAAGTCAGTCTTATATAAGTTAGTCTCATCTCAACCTAATTCGCAAATATAGATT AGATAGATGGTTTAAGTCTATAGCCAAACATTAGGGTCAAGTCATTCTATAGCTTCTGTT GTAATAGTTAGCCACAACCTTGTAAATACCCTATTATATCACATAAAGAAGTCTCCTTTG GAGCCTTGATCAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)