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Oryza sativa
cluster # 7416 cluster # 7416       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7416#0 length = 3012 sequences # 3  
consensus_7416#1 length = 842 sequences # 1  

consensusID : consensus_7416#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3012
fasta sequence
                              [ACTTGTACGACCAAAAGACGGACCGCCTCTCCCACTCCCTCCTCATCTTCATCATCTTCTTCTTCTTGTGAATTGTCAAGAAGAGAAGGGGAAGAAGTTGCGGTCTCCGTTGCTGACCGAGAGACCCGCGTGAAACCTGAAAAGAGGGGAGGGGCGGAGCTTCCTAAGAAATTGAGAAGAAGCCCACTGCCCGGCCATATGTATAGGAACAAACCATCCCTCCCTTGTAGTAGTAGTAGTAGAAGTAGTAGGAGTAGTACATATTGGAAGCAGCTGCTGAGGCCTGAGGGTAGGATAGGCTGCCCTTGAGCCTGGTTTTCCCTCGATTTCTTCGTCCTCTGCGGCA--GCGTCTTCTTCTTCTTCTTCTTCTTGGGTTGCTACCTAGCTCGTACTGGAGTATTAAGGAAGGAATAGCCGGCCGGCAAGAAAAGAAGCTCAACATCATCTAGCTCGTCGCTACTAGTAAGTAGGAGTAGTTGGCAAAATCCATCCATATATATGATGGCAACTGGCGGCGGCGATGGTCGTCGGAGGGGCCGGCGGAGGAGCAAGATGAGGCTGAGCAGGCTGTACAGTTTCGCGTGCGGGCGGAGGCCGACGGCAGTCGACGACGAAAGCTCCAGCAGGATCGGCGGGCCGGGGTTCACGCGCGTCGTCAACGCCAACGGCGGCGGCGGCATCCCGGAGTACGGGTACCGCTCCAACTCGGTGTCGACGACCAAGTACAACGTGGTCACCTTCGTGCCCAAGTCCCTGTTGGAGCAGTTCCGCAGAGTGGCCAACATCTACTTCCTCATCTCCGCCTGCCTCACCTACACCAACCTCGCCCCCTACACCTCCGCCAGCGCTGTCGCCCCCCTCGTCCTCGTCCTCCTCGCCACCATGGTCAAGGAGGCCATCGAAGACTGGAGGAGGAAGCAGCAGGATACCGAGGTAAACAACAGAAAGACAAAAGTGCTCCAGGACGGTGCTTTCCATTCTACCAAATGGATGAACCTCCAAGTTGGTGATATTGTCAAGGTTGAAAAAGATGAGTTTTTCCCTGCTGACCTAATCCTCCTCTCATCTAGCTACGAAGACGCCATTTGCTATGTTGAGACCATGAACCTGGATGGGGAGACAAATCTCAAGCTCAAGCAATCTCTAGAGGCATCATCCGGCTTGCAGGAGGATGACAGCTTCAATAGCTTCAGGGCTGTAATAAGGTGTGAGGACCCAAATCCACACCTCTATTCCTTTGTTGGCAACATCGAAATCGAAGAACAGTATCCTCTGTCACCCCAGCAGATCCTTCTCAGAGACTCAAAGCTTCGCAACACCGAGTATGTGTACGGTGTGGTCATCTTCACAGGCCATGATACAAAGGTCATGCAGAATGCTATGAAAGCCCCATCCAAGAGAAGTAAGATTGAAAGGAAGATGGACCGGATCATCTACTTGCTTTTGTCTGCACTTGTCCTGATTTCAGTCATCGGATCGGTTTTCTTTGGCATCACAACCAGAGATGACCTACAAGATGGCAGGCCGAAAAGATGGTACCTTAGGCCGGACGACTCTACCATCTACTTCAAGCCAACCAAAGCAGCCATATCAGCAATACTTCATTTCTTCACAGCCATGATTCTATATGGGAACTTCATACCAATCTCTCTGTACATCTCTATTGAGATTGTCAAGCTTCTGCAGGCTCTGTTCATCAACCAAGACATTCATATGTATCATGAGGAGACCGACACACCGGCTCATGCTAGAACATCCAACTTGAACGAGGAGTTGGGTCAAGTGGACACGATCCTTACGGATAAAACTGGGACTCTGACTTGCAATTCCATGGAGTTCATCAAATGCTCAATTGCCGGAACTGCGTATGGCCGTGGTATCACTGAGGTGGAGAGAGCAATGGCGAAAAGAAAAGGTTCTCCCTTGATCGCCGACATGGCCAGCAACACCCAAGGCTCTCAAGCTGCAATCAAAGGATTTAATTTCACGGATGAGCGTGTGATGAACGGTAACTGGGTTAGCCAACCCCACTCTGGTGTGATTCAGATGTTCCTCAGGTTGTTGGCCGTTTGCCATACGTGCATACCCGAAGTTGACGAAGAATCAGGCACGATTTCTTATGAAGCAGAGTCACCTGACGAGGCTGCTTTTGTTGTTGCCGCACGGGAGCTCGGTTTCACGTTTTACCAGAGGACACAGACCGGTGTTTTTCTGCATGAGTTAGATCCCTCGTCTGGAAAACAAGTCGACAGATCATATAAGCTCTTGCATGTCCTTGAGTTCAACAGTGCTCGGAAGCGGATGTCGGTAATAGTTAGGGATGAGGAGGGGAAGATCTTTCTCTTTAGTAAAGGCGCTGACAGTGTGATGTTCGAGAGGCTATCAAGTAGTGATTGTGCGTACAGAGAAGTGACCCAGGATCACATAAATGAATACGCTGATGCTGGTCTGAGAACACTTGTTCTCGCATACCGCCAACTTGATGAGGCCGAATATGCGAATTTCGACAGGAAGTTCACTGCAGCCAAGAACTCTGTCAGTGCTGATAGAGATGAAATGATTGAAGAGGCTGCGGATTTGCTTGAGAGGAAATTGATTCTTCTTGGTGCTGCCGCTGTCGAGTTCGGCCACGCCCTGCGCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACCTCCACCTCCCTCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAATAGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTCCACATCCAAATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTGTAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCGGACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTAATATTCATTCAGGAA]

[+] EMBL AK100999             [ACTTGTACGACCAAAAGACGGACCGCCTCTCCCACTCCCTCCTCATCTTCATCATCTTCTTCTTCTTGTGAATTGTCAAGAAGAGAAGGGGAAGAAGTTGCGGTCTCCGTTGCTGACCGAGAGACCCGCGTGAAACCTGAAAAGAGGGGAGGGGCGGAGCTTCCTAAGAAATTGAGAAGAAGCCCACTGCCCGGCCATATGTATAGGAACAAACCATCCCTCCCTTGTAGTAGTAGTAGTAGAAGTAGTAGGAGTAGTACATATTGGAAGCAGCTGCTGAGGCCTGAGGGTAGGATAGGCTGCCCTTGAGCCTGGTTTTCCCTCGATTTCTTCGTCCTCTGCGGCA  GCGTCTTCTTCTTCTTCTTCTTCTTGGGTTGCTACCTAGCTCGTACTGGAGTATTAAGGAAGGAATAGCCGGCCGGCAAGAAAAGAAGCTCAACATCATCTAGCTCGTCGCTACTAGTAAGTAGGAGTAGTTGGCAAAATCCATCCATATATATGATGGCAACTGGCGGCGGCGATGGTCGTCGGAGGGGCCGGCGGAGGAGCAAGATGAGGCTGAGCAGGCTGTACAGTTTCGCGTGCGGGCGGAGGCCGACGGCAGTCGACGACGAAAGCTCCAGCAGGATCGGCGGGCCGGGGTTCACGCGCGTCGTCAACGCCAACGGCGGCGGCGGCATCCCGGAGTACGGGTACCGCTCCAACTCGGTGTCGACGACCAAGTACAACGTGGTCACCTTCGTGCCCAAGTCCCTGTTGGAGCAGTTCCGCAGAGTGGCCAACATCTACTTCCTCATCTCCGCCTGCCTCACCTACACCAACCTCGCCCCCTACACCTCCGCCAGCGCTGTCGCCCCCCTCGTCCTCGTCCTCCTCGCCACCATGGTCAAGGAGGCCATCGAAGACTGGAGGAGGAAGCAGCAGGATACCGAGGTAAACAACAGAAAGACAAAAGTGCTCCAGGACGGTGCTTTCCATTCTACCAAATGGATGAACCTCCAAGTTGGTGATATTGTCAAGGTTGAAAAAGATGAGTTTTTCCCTGCTGACCTAATCCTCCTCTCATCTAGCTACGAAGACGCCATTTGCTATGTTGAGACCATGAACCTGGATGGGGAGACAAATCTCAAGCTCAAGCAATCTCTAGAGGCATCATCCGGCTTGCAGGAGGATGACAGCTTCAATAGCTTCAGGGCTGTAATAAGGTGTGAGGACCCAAATCCACACCTCTATTCCTTTGTTGGCAACATCGAAATCGAAGAACAGTATCCTCTGTCACCCCAGCAGATCCTTCTCAGAGACTCAAAGCTTCGCAACACCGAGTATGTGTACGGTGTGGTCATCTTCACAGGCCATGATACAAAGGTCATGCAGAATGCTATGAAAGCCCCATCCAAGAGAAGTAAGATTGAAAGGAAGATGGACCGGATCATCTACTTGCTTTTGTCTGCACTTGTCCTGATTTCAGTCATCGGATCGGTTTTCTTTGGCATCACAACCAGAGATGACCTACAAGATGGCAGGCCGAAAAGATGGTACCTTAGGCCGGACGACTCTACCATCTACTTCAAGCCAACCAAAGCAGCCATATCAGCAATACTTCATTTCTTCACAGCCATGATTCTATATGGGAACTTCATACCAATCTCTCTGTACATCTCTATTGAGATTGTCAAGCTTCTGCAGGCTCTGTTCATCAACCAAGACATTCATATGTATCATGAGGAGACCGACACACCGGCTCATGCTAGAACATCCAACTTGAACGAGGAGTTGGGTCAAGTGGACACGATCCTTACGGATAAAACTGGGACTCTGACTTGCAATTCCATGGAGTTCATCAAATGCTCAATTGCCGGAACTGCGTATGGCCGTGGTATCACTGAGGTGGAGAGAGCAATGGCGAAAAGAAAAGGTTCTCCCTTGATCGCCGACATGGCCAGCAACACCCAAGGCTCTCAAGCTGCAATCAAAGGATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC104571            [                                                                                                                                                                                                                                                                        TGGAAGCAGCTGCTGAGGCCTGAGGGTAGGATAGGCTGCCCTTGAGCCTGGTTTTCCCTCGATTTCTTCGTCCTCTGCGGCAGGGCTTCTTCTTCTTCTTCTTCTTCTTGGGTTGCTACCTAGCTCGTACTGGAGTATTAAGGAAGGAATAGCCGGCCGGCAAGAAAAGAAGCTCAACATCATCTAGCTCGTCGCTACTAGTAAGTAGGAGTAGTTGGCAAAATCCATCCATATATATNATGGCAACTGGCGGCGGCGATGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK064514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAAGAACAGTATCCTCTGTCACCCCAGCAGATCCTTCTCAGAGACTCAAAGCTTCGCAACACCGAGTATGTGTACGGTGTGGTCATCTTCACAGGCCATGATACAAAGGTCATGCAGAATGCTATGAAAGCCCCATCCAAGAGAAGTAAGATTGAAAGGAAGATGGACCGGATCATCTACTTGCTTTTGTCTGCACTTGTCCTGATTTCAGTCATCGGATCGGTTTTCTTTGGCATCACAACCAGAGATGACCTACAAGATGGCAGGCCGAAAAGATGGTACCTTAGGCCGGACGACTCTACCATCTACTTCAAGCCAACCAAAGCAGCCATATCAGCAATACTTCATTTCTTCACAGCCATGATGCTATATGGGAACTTCATACCAATCTCTCTGTACATCTCTATTGAGATTGTCAAGCTTCTGCAGGCTCTGTTCATCAACCAAGACATTCATATGTATCATGAGGAGACCGACACACCGGCTCATGCTAGAACATCCAACTTGAACGAGGAGTTGGGTCAAGTGGACACGATCCTTACGGATAAAACTGGGACTCTGACTTGCAATTCCATGGAGTTCATCAAATGCTCAATTGCCGGAACTGCGTATGGCCGTGGTATCACTGAGGTGGAGAGAGCAATGGCGAAAAGAAAAGGTTCTCCCTTGATCGCCGACATGGCCAGCAACACCCAAGGCTCTCAAGCTGCAATCAAAGGATTTAATTTCACGGATGAGCGTGTGATGAACGGTAACTGGGTTAGCCAACCCCACTCTGGTGTGATTCAGATGTTCCTCAGGTTGTTGGCCGTTTGCCATACGTGCATACCCGAAGTTGACGAAGAATCAGGCACGATTTCTTATGAAGCAGAGTCACCTGACGAGGCTGCTTTTGTTGTTGCCGCACGGGAGCTCGGTTTCACGTTTTACCAGAGGACACAGACCGGTGTTTTTCTGCATGAGTTAGATCCCTCGTCTGGAAAACAAGTCGACAGATCATATAAGCTCTTGCATGTCCTTGAGTTCAACAGTGCTCGGAAGCGGATGTCGGTAATAGTTAGGGATGAGGAGGGGAAGATCTTTCTCTTTAGTAAAGGCGCTGACAGTGTGATGTTCGAGAGGCTATCAAGTAGTGATTGTGCGTACAGAGAAGTGACCCAGGATCACATAAATGAATACGCTGATGCTGGTCTGAGAACACTTGTTCTCGCATACCGCCAACTTGATGAGGCCGAATATGCGAATTTCGACAGGAAGTTCACTGCAGCCAAGAACTCTGTCAGTGCTGATAGAGATGAAATGATTGAAGAGGCTGCGGATTTGCTTGAGAGGAAATTGATTCTTCTTGGTGCTGCCGCTGTCGAGTTCGGCCACGCCCTGCGCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACCTCCACCTCCCTCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAATAGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTCCACATCCAAATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTGTAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCGGACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTAATATTCATTCAGGAA]


>consensus_7416#0 ACTTGTACGACCAAAAGACGGACCGCCTCTCCCACTCCCTCCTCATCTTCATCATCTTCT TCTTCTTGTGAATTGTCAAGAAGAGAAGGGGAAGAAGTTGCGGTCTCCGTTGCTGACCGA GAGACCCGCGTGAAACCTGAAAAGAGGGGAGGGGCGGAGCTTCCTAAGAAATTGAGAAGA AGCCCACTGCCCGGCCATATGTATAGGAACAAACCATCCCTCCCTTGTAGTAGTAGTAGT AGAAGTAGTAGGAGTAGTACATATTGGAAGCAGCTGCTGAGGCCTGAGGGTAGGATAGGC TGCCCTTGAGCCTGGTTTTCCCTCGATTTCTTCGTCCTCTGCGGCAGCGTCTTCTTCTTC TTCTTCTTCTTGGGTTGCTACCTAGCTCGTACTGGAGTATTAAGGAAGGAATAGCCGGCC GGCAAGAAAAGAAGCTCAACATCATCTAGCTCGTCGCTACTAGTAAGTAGGAGTAGTTGG CAAAATCCATCCATATATATGATGGCAACTGGCGGCGGCGATGGTCGTCGGAGGGGCCGG CGGAGGAGCAAGATGAGGCTGAGCAGGCTGTACAGTTTCGCGTGCGGGCGGAGGCCGACG GCAGTCGACGACGAAAGCTCCAGCAGGATCGGCGGGCCGGGGTTCACGCGCGTCGTCAAC GCCAACGGCGGCGGCGGCATCCCGGAGTACGGGTACCGCTCCAACTCGGTGTCGACGACC AAGTACAACGTGGTCACCTTCGTGCCCAAGTCCCTGTTGGAGCAGTTCCGCAGAGTGGCC AACATCTACTTCCTCATCTCCGCCTGCCTCACCTACACCAACCTCGCCCCCTACACCTCC GCCAGCGCTGTCGCCCCCCTCGTCCTCGTCCTCCTCGCCACCATGGTCAAGGAGGCCATC GAAGACTGGAGGAGGAAGCAGCAGGATACCGAGGTAAACAACAGAAAGACAAAAGTGCTC CAGGACGGTGCTTTCCATTCTACCAAATGGATGAACCTCCAAGTTGGTGATATTGTCAAG GTTGAAAAAGATGAGTTTTTCCCTGCTGACCTAATCCTCCTCTCATCTAGCTACGAAGAC GCCATTTGCTATGTTGAGACCATGAACCTGGATGGGGAGACAAATCTCAAGCTCAAGCAA TCTCTAGAGGCATCATCCGGCTTGCAGGAGGATGACAGCTTCAATAGCTTCAGGGCTGTA ATAAGGTGTGAGGACCCAAATCCACACCTCTATTCCTTTGTTGGCAACATCGAAATCGAA GAACAGTATCCTCTGTCACCCCAGCAGATCCTTCTCAGAGACTCAAAGCTTCGCAACACC GAGTATGTGTACGGTGTGGTCATCTTCACAGGCCATGATACAAAGGTCATGCAGAATGCT ATGAAAGCCCCATCCAAGAGAAGTAAGATTGAAAGGAAGATGGACCGGATCATCTACTTG CTTTTGTCTGCACTTGTCCTGATTTCAGTCATCGGATCGGTTTTCTTTGGCATCACAACC AGAGATGACCTACAAGATGGCAGGCCGAAAAGATGGTACCTTAGGCCGGACGACTCTACC ATCTACTTCAAGCCAACCAAAGCAGCCATATCAGCAATACTTCATTTCTTCACAGCCATG ATTCTATATGGGAACTTCATACCAATCTCTCTGTACATCTCTATTGAGATTGTCAAGCTT CTGCAGGCTCTGTTCATCAACCAAGACATTCATATGTATCATGAGGAGACCGACACACCG GCTCATGCTAGAACATCCAACTTGAACGAGGAGTTGGGTCAAGTGGACACGATCCTTACG GATAAAACTGGGACTCTGACTTGCAATTCCATGGAGTTCATCAAATGCTCAATTGCCGGA ACTGCGTATGGCCGTGGTATCACTGAGGTGGAGAGAGCAATGGCGAAAAGAAAAGGTTCT CCCTTGATCGCCGACATGGCCAGCAACACCCAAGGCTCTCAAGCTGCAATCAAAGGATTT AATTTCACGGATGAGCGTGTGATGAACGGTAACTGGGTTAGCCAACCCCACTCTGGTGTG ATTCAGATGTTCCTCAGGTTGTTGGCCGTTTGCCATACGTGCATACCCGAAGTTGACGAA GAATCAGGCACGATTTCTTATGAAGCAGAGTCACCTGACGAGGCTGCTTTTGTTGTTGCC GCACGGGAGCTCGGTTTCACGTTTTACCAGAGGACACAGACCGGTGTTTTTCTGCATGAG TTAGATCCCTCGTCTGGAAAACAAGTCGACAGATCATATAAGCTCTTGCATGTCCTTGAG TTCAACAGTGCTCGGAAGCGGATGTCGGTAATAGTTAGGGATGAGGAGGGGAAGATCTTT CTCTTTAGTAAAGGCGCTGACAGTGTGATGTTCGAGAGGCTATCAAGTAGTGATTGTGCG TACAGAGAAGTGACCCAGGATCACATAAATGAATACGCTGATGCTGGTCTGAGAACACTT GTTCTCGCATACCGCCAACTTGATGAGGCCGAATATGCGAATTTCGACAGGAAGTTCACT GCAGCCAAGAACTCTGTCAGTGCTGATAGAGATGAAATGATTGAAGAGGCTGCGGATTTG CTTGAGAGGAAATTGATTCTTCTTGGTGCTGCCGCTGTCGAGTTCGGCCACGCCCTGCGC CAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACCTC CACCTCCCTCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAATAG TATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTCCACATCCAAAT CAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTGTAA CTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCGGAC GCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTAATA TTCATTCAGGAA



consensusID : consensus_7416#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 842
fasta sequence
                              [CCGAATTCCTCAATGTTGTCAACCTGACTCTTGGTCAATGGTGCCTGGATTCAAACTTCTATGCTCTAATTGTCTTCCTTCAGAACTCACCTAGACTAGAGAAGCTAACTCTGAAACTCGAAAAGGTAAATGCTTTCGTCCAAATGTGCACTGATCCTACTTGATTGCTTTTTACACAAGAGTTTTCACATCGGGATATAGATCACCTGTTTTTGTTGCTGTAGAGTAATATGAGAATAAGTCGAAGAATCATTGGCGAGCTTACGGAAATATCGTTTACATGCGAGCACCTTAATACTGTTGAAGTGATATGCTCGGAGAATGATCCCCAGCTCATCACTGTGCAAGATTTCTTTGTTAGCAGTGGCATGACCTCTGTTCAGTTTCATATCAAACACTGGAGCTCCAACGCCGACGACCCCGAGTTCGGCCACGCCCTGCGCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACCTCCACCTCCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAATAGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTTCCACATCCAAATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTGTAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCGGACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTAATATTCATTCAGGAACAATAAAGATACTTCCATTCTGTTCTTGT]

[-] EMBL CB629909             [CCGAATTCCTCAATGTTGTCAACCTGACTCTTGGTCAATGGTGCCTGGATTCAAACTTCTATGCTCTAATTGTCTTCCTTCAGAACTCACCTAGACTAGAGAAGCTAACTCTGAAACTCGAAAAGGTAAATGCTTTCGTCCAAATGTGCACTGATCCTACTTGATTGCTTTTTACACAAGAGTTTTCACATCGGGATATAGATCACCTGTTTTTGTTGCTGTAGAGTAATATGAGAATAAGTCGAAGAATCATTGGCGAGCTTACGGAAATATCGTTTACATGCGAGCACCTTAATACTGTTGAAGTGATATGCTCGGAGAATGATCCCCAGCTCATCACTGTGCAAGATTTCTTTGTTAGCAGTGGCATGACCTCTGTTCAGTTTCATATCAAACACTGGAGCTCCAACGCCGACGACCCCGAGTTCGGCCACGCCCTGCGCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACCTCCACCTCCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAATAGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTTCCACATCCAAATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTGTAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCGGACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTAATATTCATTCAGGAACAATAAAGATACTTCCATTCTGTTCTTGT]


>consensus_7416#1 CCGAATTCCTCAATGTTGTCAACCTGACTCTTGGTCAATGGTGCCTGGATTCAAACTTCT ATGCTCTAATTGTCTTCCTTCAGAACTCACCTAGACTAGAGAAGCTAACTCTGAAACTCG AAAAGGTAAATGCTTTCGTCCAAATGTGCACTGATCCTACTTGATTGCTTTTTACACAAG AGTTTTCACATCGGGATATAGATCACCTGTTTTTGTTGCTGTAGAGTAATATGAGAATAA GTCGAAGAATCATTGGCGAGCTTACGGAAATATCGTTTACATGCGAGCACCTTAATACTG TTGAAGTGATATGCTCGGAGAATGATCCCCAGCTCATCACTGTGCAAGATTTCTTTGTTA GCAGTGGCATGACCTCTGTTCAGTTTCATATCAAACACTGGAGCTCCAACGCCGACGACC CCGAGTTCGGCCACGCCCTGCGCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCG CCCGCCGCGACGCCAGGGACCTCCACCTCCCTCCTTCCCAATCACATTCACATTCACAAA CCACATCTACCTAGTAATAGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCAT TTTTTTTTTCCACATCCAAATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGA AGCCTAGTACTAGCCTTGTAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACA TGTAAGTACATTGGAGCGGACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTC CTTCATCATCACACATTAATATTCATTCAGGAACAATAAAGATACTTCCATTCTGTTCTT GT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7416#0      ACTTGTACGACCAAAAGACGGACCGCCTCTCCCACTCCCTCCTCATCTTCATCATCTTCT 60
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      TCTTCTTGTGAATTGTCAAGAAGAGAAGGGGAAGAAGTTGCGGTCTCCGTTGCTGACCGA 120
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GAGACCCGCGTGAAACCTGAAAAGAGGGGAGGGGCGGAGCTTCCTAAGAAATTGAGAAGA 180
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AGCCCACTGCCCGGCCATATGTATAGGAACAAACCATCCCTCCCTTGTAGTAGTAGTAGT 240
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AGAAGTAGTAGGAGTAGTACATATTGGAAGCAGCTGCTGAGGCCTGAGGGTAGGATAGGC 300
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      TGCCCTTGAGCCTGGTTTTCCCTCGATTTCTTCGTCCTCTGCGGCAGCGTCTTCTTCTTC 360
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      TTCTTCTTCTTGGGTTGCTACCTAGCTCGTACTGGAGTATTAAGGAAGGAATAGCCGGCC 420
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GGCAAGAAAAGAAGCTCAACATCATCTAGCTCGTCGCTACTAGTAAGTAGGAGTAGTTGG 480
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CAAAATCCATCCATATATATGATGGCAACTGGCGGCGGCGATGGTCGTCGGAGGGGCCGG 540
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CGGAGGAGCAAGATGAGGCTGAGCAGGCTGTACAGTTTCGCGTGCGGGCGGAGGCCGACG 600
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GCAGTCGACGACGAAAGCTCCAGCAGGATCGGCGGGCCGGGGTTCACGCGCGTCGTCAAC 660
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GCCAACGGCGGCGGCGGCATCCCGGAGTACGGGTACCGCTCCAACTCGGTGTCGACGACC 720
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AAGTACAACGTGGTCACCTTCGTGCCCAAGTCCCTGTTGGAGCAGTTCCGCAGAGTGGCC 780
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AACATCTACTTCCTCATCTCCGCCTGCCTCACCTACACCAACCTCGCCCCCTACACCTCC 840
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GCCAGCGCTGTCGCCCCCCTCGTCCTCGTCCTCCTCGCCACCATGGTCAAGGAGGCCATC 900
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GAAGACTGGAGGAGGAAGCAGCAGGATACCGAGGTAAACAACAGAAAGACAAAAGTGCTC 960
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CAGGACGGTGCTTTCCATTCTACCAAATGGATGAACCTCCAAGTTGGTGATATTGTCAAG 1020
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GTTGAAAAAGATGAGTTTTTCCCTGCTGACCTAATCCTCCTCTCATCTAGCTACGAAGAC 1080
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GCCATTTGCTATGTTGAGACCATGAACCTGGATGGGGAGACAAATCTCAAGCTCAAGCAA 1140
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      TCTCTAGAGGCATCATCCGGCTTGCAGGAGGATGACAGCTTCAATAGCTTCAGGGCTGTA 1200
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ATAAGGTGTGAGGACCCAAATCCACACCTCTATTCCTTTGTTGGCAACATCGAAATCGAA 1260
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GAACAGTATCCTCTGTCACCCCAGCAGATCCTTCTCAGAGACTCAAAGCTTCGCAACACC 1320
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GAGTATGTGTACGGTGTGGTCATCTTCACAGGCCATGATACAAAGGTCATGCAGAATGCT 1380
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ATGAAAGCCCCATCCAAGAGAAGTAAGATTGAAAGGAAGATGGACCGGATCATCTACTTG 1440
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CTTTTGTCTGCACTTGTCCTGATTTCAGTCATCGGATCGGTTTTCTTTGGCATCACAACC 1500
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AGAGATGACCTACAAGATGGCAGGCCGAAAAGATGGTACCTTAGGCCGGACGACTCTACC 1560
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ATCTACTTCAAGCCAACCAAAGCAGCCATATCAGCAATACTTCATTTCTTCACAGCCATG 1620
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ATTCTATATGGGAACTTCATACCAATCTCTCTGTACATCTCTATTGAGATTGTCAAGCTT 1680
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CTGCAGGCTCTGTTCATCAACCAAGACATTCATATGTATCATGAGGAGACCGACACACCG 1740
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GCTCATGCTAGAACATCCAACTTGAACGAGGAGTTGGGTCAAGTGGACACGATCCTTACG 1800
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GATAAAACTGGGACTCTGACTTGCAATTCCATGGAGTTCATCAAATGCTCAATTGCCGGA 1860
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ACTGCGTATGGCCGTGGTATCACTGAGGTGGAGAGAGCAATGGCGAAAAGAAAAGGTTCT 1920
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      CCCTTGATCGCCGACATGGCCAGCAACACCCAAGGCTCTCAAGCTGCAATCAAAGGATTT 1980
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      AATTTCACGGATGAGCGTGTGATGAACGGTAACTGGGTTAGCCAACCCCACTCTGGTGTG 2040
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      ATTCAGATGTTCCTCAGGTTGTTGGCCGTTTGCCATACGTGCATACCCGAAGTTGACGAA 2100
consensus_7416#1      ------------------------------------------------------------
                                                                                  

consensus_7416#0      GAATCAGGCACGATTTCTTATGAAGCAGAGTCACCTGACGAGGCTGCTTTTGTTGTTGCC 2160
consensus_7416#1      -------------------------------------------CCGAATTCCTCAATGTT 17
                                                                 * *  **  *   **  

consensus_7416#0      GCACGGGAGCTCGGTTTCACGTTTTACCAGAGG-ACACAGACCGGTGTTTTTCTGCATGA 2219
consensus_7416#1      G---------TCAACCTGACTCTTGGTCAATGGTGCCTGGATTCAAACTTCTATGCTCTA 68
                      *         **    * **  **   **  **  *   **       ** * ***   *

consensus_7416#0      GTTAGATCCCTCGTCTGGAAAACAAGTCGACAGATCATATAAGCTCTTGCATGTCCTTGA 2279
consensus_7416#1      ATTG---TCTTCCTTCAGAACTCACCT----AGACTAGAGAAGCTAACTCTGAAACTCGA 121
                       **     * ** *   ***  **  *    ***  * * *****    *     ** **

consensus_7416#0      GTTCAACAGTGCTCGGAAGCGGATGTCGGTAATAGTTAGGGATGAGGAGGGGAAGATCTT 2339
consensus_7416#1      AAAGGTAAATGCTTTCGTCCAAATGT--GCACTGATCCTACTTGA-------------TT 166
                             * ****      *  ****  * * *  *      ***             **

consensus_7416#0      TCTCTTTA-GTAAAGGCGCTGACAGTGTGATGTTCGAGAGGCTATCAAGTAGTGATTGTG 2398
consensus_7416#1      GCTTTTTACACAAGAGTTTTCACATCGGGATAT-----AGATCACC------TGTTTTTG 215
                       ** ****   **  *   * ***  * *** *     **   * *      ** ** **

consensus_7416#0      CGTACAGAGAAGTGACCCAGGATCACATAAATGAATACGCTGATGCTGGTCTGAGAACAC 2458
consensus_7416#1      T-TGCTGTAGAGTAATATGAGAATAAGTCGAAGAAT-CATTGGCGAGCTTACGGAAATA- 272
                        * * *   *** *     **  *  *  * **** *  **  *    *  *  ** * 

consensus_7416#0      TTGTTCTCGCATACCGCCAACTTGATGAGGCCGAATATGCGAATTTCGACAGGAAGTTCA 2518
consensus_7416#1      TCGTTT--ACATGCGAGCACCTTAATACTGTTGAA-GTGATATGCTCGG-AGAATGATCC 328
                      * ***    *** *   ** *** **   *  ***  **  *   ***  ** * * ** 

consensus_7416#0      CTGCAGCCAAGAACTCTGTCAGTGCTGATAGAGATGAAATGATTGAAGAGGCTGCGGATT 2578
consensus_7416#1      C--CAGCTCATCACTGTGCAAGATTTCTT-----TGTTAGCAGTGGCATGACCTCTGTTC 381
                      *  ****  *  *** **  **   *  *     **  *  * **    * *  * * * 

consensus_7416#0      TGCTTGAGAGGAAATTGATTCTTCTTGGTGCTGCCGCTGTCGAGTTCGGCCACGCCCTGC 2638
consensus_7416#1      AGTTTCATATCAAACACTGGAGCTCCAACGCCGACGACCCCGAGTTCGGCCACGCCCTGC 441
                       * ** * *  ***               ** * **    ********************

consensus_7416#0      GCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACC 2698
consensus_7416#1      GCCAGTTCTCCGTCAGGTCCACCGGGGTTGGCGTCTCCGCCCGCCGCGACGCCAGGGACC 501
                      ************************************************************

consensus_7416#0      TCCACCTCCCTCCTCCTTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAAT 2758
consensus_7416#1      TCCACCTCCCTCC---TTCCCAATCACATTCACATTCACAAACCACATCTACCTAGTAAT 558
                      *************   ********************************************

consensus_7416#0      AGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTT-CCACATCCA 2817
consensus_7416#1      AGTATAGTCTAGCAAGCAGCTACTGTTCACTAACAGCACCATTTTTTTTTTCCACATCCA 618
                      ************************************************** *********

consensus_7416#0      AATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTG 2877
consensus_7416#1      AATCAATTTCCCTTTTTCGTGTACAAAATTTATACTAGCTGAAGCCTAGTACTAGCCTTG 678
                      ************************************************************

consensus_7416#0      TAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCG 2937
consensus_7416#1      TAACTGTACATTAACCCTACTTGCTCATCTCATACGACAACATGTAAGTACATTGGAGCG 738
                      ************************************************************

consensus_7416#0      GACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTA 2997
consensus_7416#1      GACGCATACGTACGTACCATCCATTTTTATCTTGTTTTGTTCCTTCATCATCACACATTA 798
                      ************************************************************

consensus_7416#0      ATATTCATTCAGGAA----------------------------- 3012
consensus_7416#1      ATATTCATTCAGGAACAATAAAGATACTTCCATTCTGTTCTTGT 842
                      ***************                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)