These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7431#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1777 fasta sequence [CGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGAC-AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATT-GGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTC-GGGTTCACTTC-AAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGAGTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGTTGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGTACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTGAATTGCCCATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTT] [+] EMBL AK071058 [CGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGAC AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATT GGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTC GGGTTCACTTC AAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGAGTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGTTGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGTACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTGAATTGCCCATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTT] [+] EMBL AU182378 [ TCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGANCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTNTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGACAAAGTACCAGGCTATTCA ] [+] EMBL CA765065 [ CCCCAGAATTGTGAGAGATTTTGTGAGATATGCGGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCAGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGCGAC AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTCACCCTTGGCTGGTACCTGCACCCGATTATATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATTGGGGAAACAGGCGT ] [+] EMBL AU182379 [ TCAGGATACAATNTTTTGATCAGTACCTCCATAAGCTTNAGAGGGCGANCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCNGCTTGACAACTTCGAGTGGCGGCTCAGGGTTCACTTCTANAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCGCACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAACATGATAAAAAGTNAGGTTTGAGTTGNATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGAAAAANGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGNACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||