cluster # 7437

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Oryza sativa
cluster # 7437 cluster # 7437 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7437#0 length = 704 sequences # 4

consensusID : consensus_7437#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 704
fasta sequence

                              [GTCAACGATACGCCACGTAACGGCATGACA--GTTTTTTTTTTTTTTTTTTTTAA---A-AACGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC-AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG-TTGTGCCACGGGT-CAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG-TTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCGTTGGCGAGCTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTACCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNATGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA]

[+] EMBL CF301998             [GTCAACGATACGCCACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTAATTCAGATCGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG TTGTGCCACGGGT CAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG TTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCGTTGGCGAGCTCCT                                                                                                                                                       ]
[+] EMBL CF300302             [   AACGATACGCTACGTAACGGCATGACA  ATTTTTTTTTTTTTTTTTTTTAA   A AACGCCACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGTATCAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC  AAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAGCTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGAT                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF298123             [                 TAACGGCATGACT  GTGTTTTTTTTTTTTTTTTTTAA   G ACCGAGACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATTCATGATACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTG TTGTGCCACGGGT CAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACG TTGTGCTGCACCAGGAACCCCAAGAACGCCA                                                                                                                                                                                     ]
[+] EMBL BE229126             [                                                                                     ACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTGTTTGTGCCACGGGTCCAGACAGGTGCTGCAGCAGGTTGTCGAAAGG CCCTTCTGCGTC CGTTTGTGCTGCACCA GAACCC  AGAAAGCCA C TCGCCAG CTCCCGTTG  GAACTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTACCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNATGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA]




>consensus_7437#0
GTCAACGATACGCCACGTAACGGCATGACAGTTTTTTTTTTTTTTTTTTTTAAAAACGAG
ACCATGAGATAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTG
TACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGC
AGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCT
CTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAGAA
GAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATC
AAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTC
TGGATGATGGTGTTGTGCCACGGGTCAGACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCC
TTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCCTCCCG
TTGGCGAGCTCCTCTCCTTGCCCAAGGTGGTCAATTTNAGGGTTTAAAAACCGCGGGTTA
CCNCCNCCTGCGNGGAGGTGTACCCTGAAANGGTCTGCCNTGCNATCGGNNAGGATCCNA
TGTCTGCTAACTNTGANNGCATTTGNATCCCCNTCAAAAGAACA

clustalw multiple alignements is not computed in this case