cluster # 7439

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Oryza sativa
cluster # 7439 cluster # 7439 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7439#0 length = 724 sequences # 4

consensusID : consensus_7439#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 724
fasta sequence

                              [GCCAAATGCCNCGTCATCTAATTAGTGACGCACANGACATGGATTAACNANATTNCCCACTGTNCATGTCTACCTATCCANCGAAACCACAGCCAAGGGAACGGGCNTGNNGNAATCAGCGGGGAAAGAAGA-CCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAACGGGGCCTGGCCCCTCCTTTTGGCTCACAAAG-CCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTCGCCGACCCCGGCCACGCCACCATCTTCCAGGCCTTCACCCCCAAATGAGGAGTTCTTCAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGAAAAGACTGTTCGTCGACGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGGCTGTGAATGGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTG---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]

[-] EMBL AU164671             [GCCAAATGCCNCGTCATCTAATTAGTGACGCACANGACATGGATTAACNANATTNCCCACTGTNCATGTCTACCTATCCANCGAAACCACAGCCAAGGGAACGGGCNTGNNGNAATCAGCGGGGAAAGAAGA CCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAACGGGGCCTGGCCCCTCCTTTTGGCTCACAAAG CCGAGTCCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI799748             [                                                                                                               cgAATCA CGGGGAAAGAAGACCCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAGCGGGGCCTGGCCCCTCCTTTTGGCTC TAAGGCCCGAGTCCCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTCGCCGACCCCGGCCACGCCACCATCTTCCAGGCCTTCACCCCCAAATGAGGAGTTCTTCAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGAAAAGACTGTTCGTCGACGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGGCTGTGAATGGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTG   AAAAAA                                                               ]
[+] EMBL CF301912             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAGTAGGCTGT ATTGGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]
[+] EMBL CF299930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTG   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACTGTCATGCCGTTACGTACCGTAT]




>consensus_7439#0
GCCAAATGCCNCGTCATCTAATTAGTGACGCACANGACATGGATTAACNANATTNCCCAC
TGTNCATGTCTACCTATCCANCGAAACCACAGCCAAGGGAACGGGCNTGNNGNAATCAGC
GGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGG
TGTAGGATAAGTGGGAGCCCTCGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTT
ACTTATTCCGTGAGTCGGAAACGGGGCCTGGCCCCTCCTTTTGGCTCACAAAGCCGAGTC
CCTCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACAT
CTCGCCGACCCCGGCCACGCCACCATCTTCCAGGCCTTCACCCCCAAATGAGGAGTTCTT
CAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGAAAAGACTGTTCGTCGA
CGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGGCTGTGAATGGTGGTGGTGTATTGGG
ATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAA
CCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTGAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACC
GTAT

clustalw multiple alignements is not computed in this case