cluster # 7442

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Oryza sativa
cluster # 7442 cluster # 7442 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7442#0 length = 740 sequences # 4

consensusID : consensus_7442#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 740
fasta sequence

                              [GAGTAGAAAAGTGCATCTCAAGAAGTACTCGAGCAAAGAAGGAGTGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTAATAACCTACTGACCCAACACACATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAACCAATAATTCAATTATCGTTTATTTAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATG-TTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAAGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGNCNACGTTANNCNNNTGCAGCTTATCAGCTTCATCGCCTACNAGNCNNNNNGCTGNNNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCGNNNNNTNNNNNNATCTCTG]

[+] EMBL CF334199             [GAGTAGAAAAGTGCATCTCAAGAAGTACTCGAGCAAAGAAGGAGAGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTAATAACCTACTGACCCAACACACATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAACCAATAATTCAATTATCGTTTATTTAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTCGGGTGCACTGACGCCACCCAGGTGCTCA                                                                                                                                                                                     ]
[+] EMBL CF334649             [                 TCAAGAAGTACTCGAGCAAAGAAGGAGTGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTAATAACCTACTGACCCAACACACATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAACCAATAATTCAATTATCGTTTATTTAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATG TTCGGGTGCACTGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAAGCGTACCCTGATGCATTCGTCCGTA                                                                                                                                     ]
[+] EMBL CF335167             [                 TCAAGAAGTACTCGAGCAAAGAAGGAGTGAGCTTGGTGAGCTGCAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGCTCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACGTCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTAATAACCTACTGACCCAACACACATTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAACCAATAATTCAATTATCGTTTATTTAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCCCCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATG TTCGGGTGCACTGACGCCACCCAGGTGCTCAAGG                                                                                                                                                                                  ]
[+] EMBL CF195974             [                                                                                                                                                                                                                                                                                                                                       GAGGGCATCAAGAAGTTCGAGACCCTCTCCTACCTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAGTGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTTGTCTACCGTGAGAACCACAGGTCCCCTGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATG TTCGGGTGCACCGACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGNCNACGTTANNCNNNTGCAGCTTATCAGCTTCATCGCCTACNAGNCNNNNNGCTGNNNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCGNNNNNTNNNNNNATCTCTG]




>consensus_7442#0
GAGTAGAAAAGTGCATCTCAAGAAGTACTCGAGCAAAGAAGGAGTGAGCTTGGTGAGCTG
CAGAGATGGCCCCCTCCGTGATGGCGTCGTCGGCCACCACCGTCGCTCCCTTCCAGGGGC
TCAAGTCCACCGCCGGCATGCCCGTCGCCCGCCGCTCCGGCAACTCCAGCTTCGGCAACG
TCAGCAATGGCGGCAGGATCAGGTGCATGCAGGTAATAACCTACTGACCCAACACACATT
ATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAACCAATAATTCAA
TTATCGTTTATTTAGGTGTGGCCGATTGAGGGCATCAAGAAGTTCGAGACCCTCTCCTAC
CTGCCACCGCTCACCGTGGAGGACCTCCTGAAGCAGATCGAGTACCTGCTCCGTTCCAAG
TGGGTGCCCTGCCTCGAGTTCAGCAAGGTCGGATTCGTCTACCGTGAGAACCACAGATCC
CCCGGATACTACGATGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTCGGGTGCACT
GACGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAAGCGTACCCTGATGCATTC
GTCCGTATCATCGGCTTCGNCNACGTTANNCNNNTGCAGCTTATCAGCTTCATCGCCTAC
NAGNCNNNNNGCTGNNNNNNNNCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTC
GNNNNNTNNNNNNATCTCTG

clustalw multiple alignements is not computed in this case