cluster # 7445

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7445 cluster # 7445 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7445#0 length = 2030 sequences # 4
consensusID : consensus_7445#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2030
fasta sequence
                              [ACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAGATGCCCAGCTTGAGAATCGGGCGGCCGCGCCGTCCGAATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGCGAGGACCAGGCTTTGTCCGACCTTCGTGAAAAGCATCAATTTGACCTGGAGAGATTAACGCTAACATCGCAGCCACTCAGAACATTGGCGTTATTTGCATTAGCCATTGGACAGAGTATAAAAAGCACATGTTTATGTGTTCTGAAAGATAGTGCTCGGTTGAAGTTCTTGGTTCTTTTGGTTGCTTCTGCCTGTACTCCGCTCTTGTTAACTAACGGTCCACATGAAAAGCATGTTCAGGAGCTGCTTTGGTATATCAGATTTGGATTATGGTGGGTCATACTAGGGGTGGCTTCATCCATTGGGTTAGGCTCTGGTTTGCACACATTTGTATTGTATTTAGGGCCTCATATTGCCCTTTTTACAATCAAGGCAGTTCATTGCGGTCGGACTGATTTAAAGAGTGCTCCTTATGATACTATTCTCCTTAAAATGAGACCTTCATGGTTGGAGAAAGACTGTCTAGAATTTGGACCGCCAATGTACCAGGAAACAATTCCATTTAGCAAAATACTGCATGAAGTTCACCTTGAAGCTGTTCTCTGGGGCATTGGAACTGCACTTGGAGAACTTCCTCCATATTTCCTCTCGAGAGCAGCTAGCATGTCAGGACGCAAACTAGATGAGCTGGAAGAGTTGGATGCTTCCGTTTCAGGAGAAGGTTTTCTATCCTCAACTCTGCATCGGGCTAAAAGATGGCTTATGTCTCACTCACAGTATCTTAACTTCCCTA-CCA-TC-TTA-TTACTTG-CTTCGGTGCCAAA-CCCCCTCTTCGATCTTGCTGGCATTTTGTGTGGGCAATTTAACATCCCATTCTGGAAGTTCTTTCTAGCAACTTTAATTGGAAAGGCTGTTATTAAGGTTTATATCCAGACAACATTAGTAATTACTCTCTGCAATAACCAACTTCTTGATTTGGTGGAGAAAAGAATTATGTGGGTATTTGGCAATGTTCCTATGGTATCATCCGTCCTTCCCTCTTTAGTTGCCAAGTTGAAGACAGCCAAGAGCAAGTTTTTATCATCCAGTGTTGCTGCATCAGCATCAAGTGTTGTGAAGGAAACGAAGTGGAATCTATCATTCTCTTTGATCTGGAATACCGTGGTGTGGCTTTTGATCATGAACTTCATCGTTCAGATAATTACTTCTACAGCACAAAGTTATCTCAAGAGACAACAAGAGCTAGAGATCCGGAAGAAGTTGTCAGCGACGATACAAACTGTTTCTGAAACTACTGGCTTATCAAATTAATTCAGCCAGATCATTCTTTCTAATATACAAATTTCACATTCATGCCATCAATTTCTTCCCACACCTGAGGAGGATACAATTGACTTGGCAATTCCAAATATGGTTAATTTAGAAGTTACAACGAGCTGGAAAACCGGTATTCTTCAAGAATTTACATTGATATAGTTGTCACATTGTACAGTCCTGCGCTTTCCAAAAAGAAAAAAAAAACATTGTACATAACCTGTCCCATCAAGCCATTACAGGAGAATTAGGGCCCCTGCATTATTGTGGAGCGCTACTTATTGCTGTACTTAATTGAAAGGCACAAAAAGGAAATGCATGACTAGCTCTCCAATGTAATGCCTCCCCAGCTACAATTTTTGGGGCCCATTTGTACATAGTAAAACCAAGGTAGTATCAATTACACAGGGAATCAAAGCTATTCATGCCCCTG]

[+] EMBL AK105438             [ACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAGATGCCCAGCTTGAGAATCGGGCGGCCGCGCCGTCCGAATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCACGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGCGAGGACCAGGCTTTGTCCGACCTTCGTGAAAAGCATCAATTTGACCTGGAGAGATTAACGCTAACATCGCAGCCACTCAGAACATTGGCGTTATTTGCATTAGCCATTGGACAGAGTATAAAAAGCACATGTTTATGTGTTCTGAAAGATAGTGCTCGGTTGAAGTTCTTGGTTCTTTTGGTTGCTTCTGCCTGTACTCCGCTCTTGTTAACTAACGGTCCACATGAAAAGCATGTTCAGGAGCTGCTTTGGTATATCAGATTTGGATTATGGTGGGTCATACTAGGGGTGGCTTCATCCATTGGGTTAGGCTCTGGTTTGCACACATTTGTATTGTATTTAGGGCCTCATATTGCCCTTTTTACAATCAAGGCAGTTCATTGCGGTCGGACTGATTTAAAGAGTGCTCCTTATGATACTATTCTCCTTAAAATGAGACCTTCATGGTTGGAGAAAGACTGTCTAGAATTTGGACCGCCAATGTACCAGGAAACAATTCCATTTAGCAAAATACTGCATGAAGTTCACCTTGAAGCTGTTCTCTGGGGCATTGGAACTGCACTTGGAGAACTTCCTCCATATTTCCTCTCGAGAGCAGCTAGCATGTCAGGACGCAAACTAGATGAGCTGGAAGAGTTGGATGCTTCCGTTTCAGGAGAAGGTTTTCTATCCTCAACTCTGCATCGGGCTAAAAGATGGCTTATGTCTCACTCACAGTATCTTAACTTCCCTA CCA TC TTA TTACTTG CTTCGGTGCCAAA CCCCCTCTTCGATCTTGCTGGCATTTTGTGTGGGCAATTTAACATCCCATTCTGGAAGTTCTTTCTAGCAACTTTAATTGGAAAGGCTGTTATTAAGGTTTATATCCAGACAACATTAGTAATTACTCTCTGCAATAACCAACTTCTTGATTTGGTGGAGAAAAGAATTATGTGGGTATTTGGCAATGTTCCTATGGTATCATCCGTCCTTCCCTCTTTAGTTGCCAAGTTGAAGACAGCCAAGAGCAAGTTTTTATCATCCAGTGTTGCTGCATCAGCATCAAGTGTTGTGAAGGAAACGAAGTGGAATCTATCATTCTCTTTGATCTGGAATACCGTGGTGTGGCTTTTGATCATGAACTTCATCGTTCAGATAATTACTTCTACAGCACAAAGTTATCTCAAGAGACAACAAGAGCTAGAGATCCGGAAGAAGTTGTCAGCGACGATACAAACTGTTTCTGAAACTACTGGCTTATCAAATTAATTCAGCCAGATCATTCTTTCTAATATACAAATTTCACATTCATGCCATCAATTTCTTCCCACACCTGAGGAGGATACAATTGACTTGGCAATTCCAAATATGGTTAATTTAGAAGTTACAACGAGCTGGAAAACCGGTATTCTTCAAGAATTTACATTGATATAGTTGTCACATTGTACAGTCCTGCGCTTTCCAAAAAGAAAAAAAAAACATTGTACATAACCTGTCCCATCAAGCCATTACAGGAGAATTAGGGCCCCTGCATTATTGTGGAGCGCTACTTATTGCTGTACTTAATTGAAAGGCACAAAAAGGAAATGCATGACTAGCTCTCCAATGTAATGCCTCCCCAGCTACAATTTCTGGGGCCCATTTGTACATAGTAAAACCAAGGTAGTATCAATTACACAGGGAATCAAAGCTATTCATGCCCCTG]
[+] EMBL BI805260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTAACTTTCTTACCCATTCTTTATTTACTTGCCTTCGGT CCAAACCCCCCTCTTCGATCTTGCT GCATTTTGTGTGGCCAATTTAACATCCCATTCTGGAAGTTCTTTCTACCAACTTTAATTGGAAAGGCTGTTATTAAGGTTTATATCCAGACAACGTTAGTAATTACTCTCTGCAATAACCAACTTCTTGATTTGGTGGAGAAAAGAATTATGTGGGTATTTGGCAATGTTCCTATGGTATCATCCGTCCTTCCCTCTTTAGTTGCCAAGTTGAAGACAGCCAAGAGCAAGTTTTTATCAGCCAGTGTTGCTGCATCAGCATCAAGTGTTGTGAAGGAAACGAAGTGGAATCTATCATTCTCTTTGATCTGGAATACCGTGGTGTGGCTTTTGATCATGAACTTCATCGTTCAGATAATTACTTCTACAGCACAAAGTTATCTCAAGAGACAACAAGAGCTAGAGATCCGGAAGAAGTTGTCAGCGACGATAC AACTGTTTCTGAAACTACTGGCTTATCAAATTAATTCAGCCAGATCATTCTTTCTAATAAAAAAAaaa                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB638755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGAGCTAGAGATCCGGAAGAAGTTGTCAGCGACGATACAAACTGTTTCTGAAACTACTGGCTTATCAAATTAATTCAGCCAGATCATTCTTTTTAATATACAAATTTCACATTCATGCCATCAATTTCTTCCCACACCTGAGGAGGATACAATTGACTTGGCAATTCCAAATATGGTTAATTTAGAAGTTACAACGAGCTGGAAAACCGGTATTCTTCAAGAATTTACATTGATATAGTTGTCACATTGTACAGTCCTGCGCTTTCCAAAAAGAAAAAAAAAACATTGTACATAACCTGTCCCATCAAGCCATTACAGGAGAATTAGGGCCCCTGCATTATTGTGGAGCGCTACTTATTGCTGTACTTAATTGAAAGGCACAAAAAGGAAATGCATGACTAGCTCTCCAATGTAATGCCTCCCCAGCTACAATTTTTGGGGCCCATTTGTACATAGTAAAACCAA                                            ]
[-] EMBL CB641355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTGGCAATTCCAAATATGGTTAATTTAGAAGTTACAACGAGCTGGAAAACCGGTATTCTTCAAGAATTTACATTAATATAGTTGTCACATTGAACAGTCTTGCGCTTTCCAAAAAGAAAAAAAAAACATTGTACATAACCTGTCCCATCAAGCCATTACAGGAGAATTAGGGCCCCTGCATTATTGTGGAGCGCTACTTATTGCTGTACTTAATTGAAAGGCACAAAAAGGAAATGCATGACTAGCTTTCCAATGTAATGCCTCCCCAGCTACAATTTTTGGGGCCCATTTGTACATAGTAAAACCAAGGTAGTATCAATTACACAGGGA                      ]




>consensus_7445#0
ACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAGATGCCCAGCTTGAGAATCGGGCG
GCCGCGCCGTCCGAATTGTAGTCTGGAGAGGCGTCCTCAGCGACGGACCGGGCCCAAGTC
CCCTGGAAAGGGGCGCCTGGGAGGGTGAGAGCCCCGTCCGGCCCGGACCCTGTCGCCCCA
CGAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTC
CGTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATG
AAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGCGAGGACCAGGCTTT
GTCCGACCTTCGTGAAAAGCATCAATTTGACCTGGAGAGATTAACGCTAACATCGCAGCC
ACTCAGAACATTGGCGTTATTTGCATTAGCCATTGGACAGAGTATAAAAAGCACATGTTT
ATGTGTTCTGAAAGATAGTGCTCGGTTGAAGTTCTTGGTTCTTTTGGTTGCTTCTGCCTG
TACTCCGCTCTTGTTAACTAACGGTCCACATGAAAAGCATGTTCAGGAGCTGCTTTGGTA
TATCAGATTTGGATTATGGTGGGTCATACTAGGGGTGGCTTCATCCATTGGGTTAGGCTC
TGGTTTGCACACATTTGTATTGTATTTAGGGCCTCATATTGCCCTTTTTACAATCAAGGC
AGTTCATTGCGGTCGGACTGATTTAAAGAGTGCTCCTTATGATACTATTCTCCTTAAAAT
GAGACCTTCATGGTTGGAGAAAGACTGTCTAGAATTTGGACCGCCAATGTACCAGGAAAC
AATTCCATTTAGCAAAATACTGCATGAAGTTCACCTTGAAGCTGTTCTCTGGGGCATTGG
AACTGCACTTGGAGAACTTCCTCCATATTTCCTCTCGAGAGCAGCTAGCATGTCAGGACG
CAAACTAGATGAGCTGGAAGAGTTGGATGCTTCCGTTTCAGGAGAAGGTTTTCTATCCTC
AACTCTGCATCGGGCTAAAAGATGGCTTATGTCTCACTCACAGTATCTTAACTTCCCTAC
CATCTTATTACTTGCTTCGGTGCCAAACCCCCTCTTCGATCTTGCTGGCATTTTGTGTGG
GCAATTTAACATCCCATTCTGGAAGTTCTTTCTAGCAACTTTAATTGGAAAGGCTGTTAT
TAAGGTTTATATCCAGACAACATTAGTAATTACTCTCTGCAATAACCAACTTCTTGATTT
GGTGGAGAAAAGAATTATGTGGGTATTTGGCAATGTTCCTATGGTATCATCCGTCCTTCC
CTCTTTAGTTGCCAAGTTGAAGACAGCCAAGAGCAAGTTTTTATCATCCAGTGTTGCTGC
ATCAGCATCAAGTGTTGTGAAGGAAACGAAGTGGAATCTATCATTCTCTTTGATCTGGAA
TACCGTGGTGTGGCTTTTGATCATGAACTTCATCGTTCAGATAATTACTTCTACAGCACA
AAGTTATCTCAAGAGACAACAAGAGCTAGAGATCCGGAAGAAGTTGTCAGCGACGATACA
AACTGTTTCTGAAACTACTGGCTTATCAAATTAATTCAGCCAGATCATTCTTTCTAATAT
ACAAATTTCACATTCATGCCATCAATTTCTTCCCACACCTGAGGAGGATACAATTGACTT
GGCAATTCCAAATATGGTTAATTTAGAAGTTACAACGAGCTGGAAAACCGGTATTCTTCA
AGAATTTACATTGATATAGTTGTCACATTGTACAGTCCTGCGCTTTCCAAAAAGAAAAAA
AAAACATTGTACATAACCTGTCCCATCAAGCCATTACAGGAGAATTAGGGCCCCTGCATT
ATTGTGGAGCGCTACTTATTGCTGTACTTAATTGAAAGGCACAAAAAGGAAATGCATGAC
TAGCTCTCCAATGTAATGCCTCCCCAGCTACAATTTTTGGGGCCCATTTGTACATAGTAA
AACCAAGGTAGTATCAATTACACAGGGAATCAAAGCTATTCATGCCCCTG
clustalw multiple alignements is not computed in this case