cluster # 7446

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7446 cluster # 7446 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7446#0 length = 1435 sequences # 4
consensusID : consensus_7446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1435
fasta sequence
                              [GCTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCCAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGAGGAAGACAACGTCACCGCCTTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC-GGGCCGATGA-GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG-AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCACCTATTGT]

[+] EMBL AK069781             [GCTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCCAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGAGGAAGACAACGTCACCGCCTTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC GGGCCGATGA GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATA                                      ]
[+] EMBL AK060189             [ CTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCTAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGGGGAAGACAACGTCACCGCCCTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC GGGCCGATGA GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGGGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCACCTATTGT]
[+] EMBL AU065266             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGANTGA  CCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCANATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGANCTATTCGGGGCCGATGAGGGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAAGGAGACGATAACAGCGAGATGATCCGGCANTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAAGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAGAAATCTTCGTGTTNGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCAATCTTAAGGATGCTTNCATTGAATT                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU095258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCAaaaa    ]




>consensus_7446#0
GCTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGAT
CTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCC
CCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAG
ATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCAC
GTGTTCGACATCGTGGGGTACAGCCAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACG
TCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCAC
GTCATCCTCCTCGACGACGAGGAAGACAACGTCACCGCCTTCCTCGAGCTCCAGAGCCAG
GGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTC
GCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGAT
GAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTAT
CTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTG
TCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTC
GGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACC
TTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC
GGGCCGATGAGGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTG
TTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAG
GGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTG
GACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAGAATCTTCGTGTTGGTAACGTT
GCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATT
GAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGAT
CTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAG
AAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTT
AGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTT
TACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCACCTATTGT
clustalw multiple alignements is not computed in this case