These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7446#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1435 fasta sequence [GCTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCCAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGAGGAAGACAACGTCACCGCCTTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC-GGGCCGATGA-GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG-AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCACCTATTGT] [+] EMBL AK069781 [GCTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCCAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGAGGAAGACAACGTCACCGCCTTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC GGGCCGATGA GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATA ] [+] EMBL AK060189 [ CTCCCTCGTCCTCGTCTTCCCCTCCATCCGCCACCGCCGCCGCCGCCGCCGCCGGCGATCTTCTCAAGTGCCGCCGCCGGTGGTTCGATTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCCAATCCGTTCGTCCGCCCTCCACCTCCGACGCGGCGGCGGCGGCATGAAGCGGCACCAGATGGAGTCGGTGCCGAGGACGGTCTCGACGGTGGTGCCCAACACGGCGGAGGCCACCCACGTGTTCGACATCGTGGGGTACAGCTAGATGAAGGGGAGGGGCCGCGAGGAGCACGTCACGTCGGGGACCTTCGTCGTCGGCGGCCTCCACTGGGCCATCCTCCTCTTCCCGGACACCCACGTCATCCTCCTCGACGACGGGGAAGACAACGTCACCGCCCTCCTCGAGCTCCAGAGCCAGGGGGGAAGCAAGGTGCGGGCGTGCTGCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGCCGGATGCCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCAGATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGAGCTATGC GGGCCGATGA GGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGGGGGAGACGATAACAGCGAGATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCACCTATTGT] [+] EMBL AU065266 [ GCGACGTCAGGCTGGTCGACCAGACCACCGGCCTCGCCTCCTCTGCTGCGCCGGCGCAGANTGA CCAAGACATTCAAGGTGTTCAATGCCGATGAATCCAACAGGGTCAGCTGTCTCAAGATGAAGAGGACCGAATTCGAGGCGCCGCCGTATCTCGTCGACGATCGGATTACCCTGGAGTGTGTGGTCACTGTCAAGAAGGAGCCGAGGGTGTCGAGAGCTAGACCAGTCCCGAGGATCAAGGTGCCGCCGAGCAACATGATGCAGCAACTCGGCGATCTGCTGGAGTCCAAGGAGGGGGCANATGTGGTGTTCGATGTCGCGGGGGAGACCTTCCCGGCGCACAAGCTTGTGCTGGCGATGCGGTCTCCTGTCTTCAAAGCGGANCTATTCGGGGCCGATGAGGGGAGAGCGGGACAGAGCCTATCAGCATTGTGGATATGCAACCGGTTGTGTTCAAGGCCCTGCTCCAGTTCATCTATACTGATTGGTTGCCGTCAATTCGTGATCTTGAAGGAGACGATAACAGCGAGATGATCCGGCANTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAAGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAGAAATCTTCGTGTTNGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCAATCTTAAGGATGCTTNCATTGAATT ] [+] EMBL AU095258 [ GATGATCCGGCACTTGCTTGTCGCCGCGGACAGATATGCTGTGGACAGGCTGAAGCTGTTGTGTCAAAGCATCCTTTGCAAG AATCTTCGTGTTGGTAACGTTGCAACTACACTGGCTCTGGCTGATCAACATCATTGTGGCATGCTTAAGGATGCTTGCATTGAATTTATGTCATGTCCAAACATGTTGGATGATGTAGTGGCATCCCAAGGGTTTGTGGATCTTGAAAACACAGCTCCTTCTCTCGTCGCTTAGGCAAAGGAAAAAATGGGCAGGTTCAAGAAAATGTCGAGGATGACAAAGAGCAATGCACCGGAAGATGAACCTAACAGTAATTCGTTTAGTTTATAAGTAATATGGATATCTGTCTACTTTTACTGGATCAGGTCCTTGTGGTTACTTTACTCTCTATATAAATAGAAATAACTTAAACACTGGTATTGCTTGCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||