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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7447 cluster # 7447       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7447#0 length = 530 sequences # 4  

consensusID : consensus_7447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 530
fasta sequence
                              [CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGC-ATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTCCAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT]

[+] EMBL CF302080             [CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGCGATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTCCAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT]
[-] EMBL AU198244             [                              TTTTTTTTTTTTTTTTNGAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGANATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGANGCTTGATCTTAGCTTAGTTGCCACCANACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCNAAGCCGATGATACGGACAAAGGC ATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCATCGGGGCAGCCNAACATGGGCAGCTTCCACATGGTCCAATACCTG                                                                                                     ]
[+] EMBL CF333655             [                              TTTTTTTTTTTTTTTTTGAGGGAGGGAAGAGATTATTACATATGTGTTAAAAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATTTTAGCTTAATTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATA                                                                                                                                                                                                                  ]
[+] EMBL BE228331             [                            gagTTTTNTTTTTTTTTTTT   GAGGGAAGAGA TATTACATATGTGTTAAGAGCAGANGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAATATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTANTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTNGGCGATNAANCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGC ATCGGGGTNGGCCT                                                                                                                                                                                        ]


>consensus_7447#0 CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGA GATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAA ATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTG CATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCA CCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTG ACGTTGTCGAAGCCGATGATACGGACAAAGGCATCGGGGTAGGCCTTCTTGGCCTCCTCG AGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTC CAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACC TTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)