cluster # 7447

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Oryza sativa
cluster # 7447 cluster # 7447 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7447#0 length = 530 sequences # 4

consensusID : consensus_7447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 530
fasta sequence

                              [CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGC-ATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTCCAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT]

[+] EMBL CF302080             [CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGCGATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTCCAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT]
[-] EMBL AU198244             [                              TTTTTTTTTTTTTTTTNGAGGGAGGGAAGAGATTATTACATATGTGTTAAGAGCAGAGGCCATTGANATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGANGCTTGATCTTAGCTTAGTTGCCACCANACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCNAAGCCGATGATACGGACAAAGGC ATCGGGGTAGGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCATCGGGGCAGCCNAACATGGGCAGCTTCCACATGGTCCAATACCTG                                                                                                     ]
[+] EMBL CF333655             [                              TTTTTTTTTTTTTTTTTGAGGGAGGGAAGAGATTATTACATATGTGTTAAAAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATTTTAGCTTAATTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATA                                                                                                                                                                                                                  ]
[+] EMBL BE228331             [                            gagTTTTNTTTTTTTTTTTT   GAGGGAAGAGA TATTACATATGTGTTAAGAGCAGANGCCATTGAGATGGTACATAACCAAACTGTAAAATAAAAATATATAGCATATTATATATTGATATATCATCAATATAGCCCAAAACAAAGCTGCATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTANTTGCCACCAGACTCCTCGCAACCTGGGGGCTTGTNGGCGATNAANCTAATCAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACAAAGGC ATCGGGGTNGGCCT                                                                                                                                                                                        ]




>consensus_7447#0
CAACGATACGCTACTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTAGGGAGGGAAGA
GATTATTACATATGTGTTAAGAGCAGAGGCCATTGAGATGGTACATAACCAAACTGTAAA
ATAAAAATATATAGCATATTATATATTGATATATCATCAACATAGCCCAAAACAAAGCTG
CATACTATTATTATAGGCAGCAATCCACCAGCGCGATGCTTGATCTTAGCTTAGTTGCCA
CCAGACTCCTCGCAACCTGGGGGCTTGTAGGCGATGAAGCTAATCAACTGCACCTGCCTG
ACGTTGTCGAAGCCGATGATACGGACAAAGGCATCGGGGTAGGCCTTCTTGGCCTCCTCG
AGCTCCTTGAGCACCTGNGTGGCATCGGTGCAGCCGAACATGGGCAGCTTCCACATGGTC
CAATACCTGCCATCGTAGTACCCGGGAGACCTGTGGTTCTCACGGTAGACGAATCCAACC
TTGCTGAACTCGAGGCAAGGCACCCACTTGGATCGAAGCAGGTACTCGAT

clustalw multiple alignements is not computed in this case