cluster # 7458

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Oryza sativa
cluster # 7458 cluster # 7458 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7458#0 length = 939 sequences # 4
consensusID : consensus_7458#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 939
fasta sequence
                              [GCCGCTCGCGGTTTCTCGGGCCAAGAAGGCGGGCAATGCGGGTGCCTCCAAGGCCAAGAAGGACGAGGACGACAGCGGCGACGATGACGACGACTACCACGTGCCGCTCTCGCGGTCCAATAAGGGAAAAGAGAAGCAGAAAAGCACCGTTAAGGCTAAGGTTAAGAAGGAAGAAACCGATTCCGATGATGAACGCAAGCCAAAGGCGCAGAAGAAAAGTTCAGCTGTGACCAAGACCTCCAAGGTTAAGAAAATAAAAGATGAGGATCTGGAAATCGATACCAAGAAAATAAAGAAGGGTGCTGCCACTAGAAAGGGAGATGCAGA-GAAGGTGAAGAAAGAGAAAAAGGTGTATGATTTGCCAGGG-CAGAAGCATGATCCT-CCTCAAGAAAGGGAT-CCACTGAGGATA-TTCTATGAATCGCTCTAT-GAGCAGGTGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAAAAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAGGAAAAGATGA-GAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAAGTGAAGGAATGCACTGCTTAGAAGTTCCACCTGTTGCTTAGTTCTGGAATGACAATGGTTTTCCTGACCAGAATGAAGGGAAAAT]

[+] EMBL AK058379             [GCCGCTCGCGGTTTCTCGGGCCAAGAAGGCGGGCAATGCGGGTGCCTCCAAGGCCAAGAAGGACGAGGACGACAGCGGCGACGATGACGACGACTACCACGTGCCGCTCTCGCGGTCCAATAAGGGAAAAGAGAAGCAGAAAAGCACCGTTAAGGCTAAGGTTAAGAAGGAAGAAACCGATTCCGATGATGAACGCAAGCCAAAGGCGCAGAAGAAAAGTTCAGCTGTGACCAAGACCTCCAAGGTTAAGAAAATAAAAGATGAGGATCTGGAAATCGATACCAAGAAAATAAAGAAGGGTGCTGCCACTAGAAAGGGAGATGCAGA GAAGGTGAAGAAAGAGAAAAAGGTGTATGATTTGCCAGGG CAGAAGCATGATCCT CCTCAAGAAAGGGAT CCACTGAGGATA TTCTATGAATCGCTCTAT GAGCAGGTGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAAAAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAGGAAAAGATGA GAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAAGTGAAGGAATGCACTGCTTAGAAGTTCCACCTGTTGCTTAGTTCTGGAATGACAATGGTTTTCCTGACCAGAATGAAGGGAAAAT]
[+] EMBL AU065302             [                                                                                                                                                                                                                                                        AGAAAATAAAAGATGAGGATCTGGAAATCGATACCAAGAAAATAAAGAAGGGTGCTGCCACTAGAAAGGGAGATGCAGA GAAGGTGAAGAAAGAGAAAAAGGTGTATGATTTGCCAGGG CAGAAGCATGATCCT CCTCAAGAAAGGGAT CCACTGAGGATA TTCTATGAATCGCTCTAT GAGCAGGTGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAAAAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAGGAAAAGATGAGGAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAAGTGAAGG ATGCACTGCTTAGA                                                               ]
[+] EMBL AU095322             [                                                                                                                                                                                                                                                       agGAAATTAAAAGATGAGGATCTGG AATCGTTACCCAGGAAATAAAGAAGGGTGCTNCCACTAG AAGGGAGATGCAGAGGAAGNTGAAGAAAGAGAAAAAGGTGTATGATTTGCCAGGGCCAGAAGCATGATCCTCCCTCAAGAAAGGGATCCCACTGAGGATATTTCTATGAATCGCTCTATGGAGCAGGTGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTTACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTCGCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTTGTCATCTGCTACAAAAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAGGAAAAGATGA GAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAAGTGAAGGAATGCACTGCTTAGAAGTTCCACCaaaaaaa                                               ]
[+] EMBL AK059080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAACTACCGCGCAGAAGAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGACGAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAATCAGGGTAACCTTAGGAAAAGATGA GAGATTTTCCCTTTCCATGTACTGACATGCATGAGCATCTGGATACTGAAGTGAAGGAATGCACTGCTTAGAAGTTCCACCTGTTGCTTAGTTCTGGAATGACAATGGTTTTCCTGACCAGAATGAAGGGAAAAT]




>consensus_7458#0
GCCGCTCGCGGTTTCTCGGGCCAAGAAGGCGGGCAATGCGGGTGCCTCCAAGGCCAAGAA
GGACGAGGACGACAGCGGCGACGATGACGACGACTACCACGTGCCGCTCTCGCGGTCCAA
TAAGGGAAAAGAGAAGCAGAAAAGCACCGTTAAGGCTAAGGTTAAGAAGGAAGAAACCGA
TTCCGATGATGAACGCAAGCCAAAGGCGCAGAAGAAAAGTTCAGCTGTGACCAAGACCTC
CAAGGTTAAGAAAATAAAAGATGAGGATCTGGAAATCGATACCAAGAAAATAAAGAAGGG
TGCTGCCACTAGAAAGGGAGATGCAGAGAAGGTGAAGAAAGAGAAAAAGGTGTATGATTT
GCCAGGGCAGAAGCATGATCCTCCTCAAGAAAGGGATCCACTGAGGATATTCTATGAATC
GCTCTATGAGCAGGTGCCCACTAGTGAAATGGCTGCAATCTGGTTGATGGAATGGGGTTT
ACTCCCAGTGGATGTGGCTCAAAAGGTCTTTGAGAAGAAACAGGGCCAGAAACTGAAGTC
GCCAGTGAAAACAACCTCTGCAAAGAGAAGGCCAGACACTCCAACCAAAAAGCCACAGTT
GTCATCTGCTACAAAAACCAACTCAGCCGTAAAGGATTCTGGAAAAACTACCGCGCAGAA
GAAGAGGAGGGCAAGCAGTGACACAGATGATGACGATGATGACTTCATTGTTTCTAAGAC
GAAGACCAAAATGCAAAAGATGAATAGCTAGGGGTATCATCCTTGGCATAATTGCTGAAT
CAGGGTAACCTTAGGAAAAGATGAGAGATTTTCCCTTTCCATGTACTGACATGCATGAGC
ATCTGGATACTGAAGTGAAGGAATGCACTGCTTAGAAGTTCCACCTGTTGCTTAGTTCTG
GAATGACAATGGTTTTCCTGACCAGAATGAAGGGAAAAT
clustalw multiple alignements is not computed in this case