cluster # 7461

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Oryza sativa
cluster # 7461 cluster # 7461 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7461#0 length = 688 sequences # 4

consensusID : consensus_7461#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 688
fasta sequence

                              [AGGTGTGCCTTTAGGGCATCCTAGTAGTGTCGAGACCCTCTCGTTCCTGCCCCCGTTCCGTGGAGGACCT-CTGAACCAG-TC-GAGTACCTAC-TCCGTTTCCAAGTGGGGTGCCCTGTCTCGAGTTCAGCCAAGGTCGGA-TTG-TCTACCGT-GAGAACCACAGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGACAGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTC-GTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCA-GTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCTATGAAAGCTCCG-GCTATATATA-TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGT-CATGCAGTTACGTAGCGAAGGGCGAAT]

[+] EMBL BM418794             [AGGTGTGCCTTTAGGGCATCCTAGTAGTGTCGAGACCCTCTCGTTCCTGCCCCCGTTCCGTGGAGGACCT CTGAACCAG TC GAGTACCTAC TCCGTTTCCAAGTGGGGTGCCCTGTCTCGAGTTCAGCCAAGGTCGGA TTG TCTACCGT GAGAACCACAGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGACAGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCTGTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCA GTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCTATGAAAGCTCCG GCTATATATA TTTAAAAAAAAAA                                                      ]
[+] EMBL BI810174             [                                                                 GACCTCCGGAACCAGTTCGGAGTACGTACGTCCGTT  C AGT GGGTCCCCTGTCTCGAGTTCAGCCAAGTTCGGATTTGTTCTACCGTGGAGAACCACCGGTCCCCCGGATACTACGACGGCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGAC GCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTC GTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCACGTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCTATGAAAGCTCCG GCTATATATA TTTAAAAAAAAAA                                                      ]
[-] EMBL CF318041             [                                                                                                                                                                                                                                                                  CGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGCTTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTTTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTT GTTTAATTGTTCATCTCTGATTCGATGATGTCTCCCCCCTTGTTTCGTGTGTTCCCA GTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGTTGGGTGAGGCATATGTGAATGAAATATATGGAAGCTCCGCGCTATATATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGT CATGCAGTTACGTAGCGAAGGGCGAAT]
[-] EMBL CA752891             [                                                                                                                                                                                                                                                                                               CATTCGTCCGTATCATCGGCTTCGACAACGTTAGGCAGGTGCAGCTTATCAGCTTCATCGCCTACAAGCCCCCGGGCTGCGAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTC GTTTAATTGTCCATCTCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCA GTTTGTTCATCGTCTTTTGATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGATGTAAGAGTGGTATCTGCTACGACTATATGTTGTTGGGTGAGGCATATGTGAATGAAATCTATGAAAGCTCCG GCTATATATA TCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTGTACCTGCccgggcgg              ]




>consensus_7461#0
AGGTGTGCCTTTAGGGCATCCTAGTAGTGTCGAGACCCTCTCGTTCCTGCCCCCGTTCCG
TGGAGGACCTCTGAACCAGTCGAGTACCTACTCCGTTTCCAAGTGGGGTGCCCTGTCTCG
AGTTCAGCCAAGGTCGGATTGTCTACCGTGAGAACCACAGGTCCCCCGGATACTACGACG
GCAGGTACTGGACCATGTGGAAGCTGCCCATGTTTGGATGCACCGACAGCCACCCAGGTG
CTCAAGGAGCTCGAGGAGGCCAAGAAGGCGTACCCTGATGCATTCGTCCGTATCATCGGC
TTCGACAACGTCAGGCAGGTGCAGCTCATCAGCTTCATCGCCTACAAGCCCCCGGGCTGC
GAGGAGTCTGGTGGCAACTAAGCCGTCATCGTCATATATAGCCTCGTTTAATTGTTCATC
TCTGATTCGATGATGTCTCCCACCTTGTTTCGTGTGTTCCCAGTTTGTTCATCGTCTTTT
GATTTTACCGGCCGTGCTCTGCTTTTGTTTTTGTTTCACCTGATCTCTCTCTGACTTGAT
GTAAGAGTGGTATCTGCTACGACTATATGTTGATGGGTGAGGCATATGTGAATGAAATCT
ATGAAAGCTCCGGCTATATATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTG
TCATGCAGTTACGTAGCGAAGGGCGAAT

clustalw multiple alignements is not computed in this case