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Oryza sativa
cluster # 7514 cluster # 7514       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7514#0 length = 2100 sequences # 1  
 consensus_7514#1 length = 1047 sequences # 1  
consensus_7514#2 length = 683 sequences # 2  
consensusID : consensus_7514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2100
fasta sequence 
                              [AAAATACGGTTGTTGCTGCAAACGTTAATAGGTACATGAAGTCTTGAACAAAAAATAGTCTCCAAACCTAAACCATCCTACCATGTTCATTTCGGAGTTAATAGGTACAGACATCTGAACAAATAGAAAATTTGATTAGATAGGGTATTCAATTGAACCTGGCTTTCTAGCAGCAAAATGAAAAGAAAATGACATTTAATTGAATATGTACTTGCAGCTCTAGAATGAAAATATATTCAATTGAACATGTCTTTTAGCAGCAAAATCGAATCGTTGCATCAAGTGCAAGTTGGGTGAGCTGCTCAAAAGCAAAATGGAACAGCTGGCCTCCTTGATTTTACATCCTTACTTTCCTGAAGAAAAAAAATGATCCTTTTATTTTACTATATATTCATAGATCAAGCCAAAATTTGGTTAAATCAAAATCTACCTTTTTAGCACACAGAATTAGACCTGCAGTTGTACTCTCTCCAACAGAATTGTACAGAAATACTCGGTGAAAAGTGGGATGTCCAGGCTTTTACAGCAATTGTAGAGTAAAAAGATCACCAGGATAGTGAAATTTTATACTTCACTATATATTCAGATAAAAAGCTATATTTACAGCAATTGTATGTATGTATGTACGTATGTATCAACCCAAGTACTGACTCATGGGCATCCAGTTCATGAATAGAAAAGATTAATGTTCCAGTTAAAGGATTGGAAGAAATTATGCTAGTTACCTTTGGAAGAAATTATGCTAGTTACCTTTCGAAGCAAAAGGACCAACTTTGGGATTGAATCTGATGCCTTTACTTATAGGCATTCCTCCTTTTAAAATTGAAGGTAACAAAATGAATCATTGAAGCATCAAAAGAACCACTTACTCCATGTACAGACAAAATAGAGAGCATTTGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTACAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTGCACCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTGAATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAGTCGCACGGTGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACCTGGCATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCTCCCAGAGTCAGCACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGACAACAGCGCCGAGGTGGCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGATCTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTGTGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAGAGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCTGCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGGGAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCACGCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGGCAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGATGGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGGCGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGATGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTGGCCACGGCGGA]

[+] EMBL AK119383             [AAAATACGGTTGTTGCTGCAAACGTTAATAGGTACATGAAGTCTTGAACAAAAAATAGTCTCCAAACCTAAACCATCCTACCATGTTCATTTCGGAGTTAATAGGTACAGACATCTGAACAAATAGAAAATTTGATTAGATAGGGTATTCAATTGAACCTGGCTTTCTAGCAGCAAAATGAAAAGAAAATGACATTTAATTGAATATGTACTTGCAGCTCTAGAATGAAAATATATTCAATTGAACATGTCTTTTAGCAGCAAAATCGAATCGTTGCATCAAGTGCAAGTTGGGTGAGCTGCTCAAAAGCAAAATGGAACAGCTGGCCTCCTTGATTTTACATCCTTACTTTCCTGAAGAAAAAAAATGATCCTTTTATTTTACTATATATTCATAGATCAAGCCAAAATTTGGTTAAATCAAAATCTACCTTTTTAGCACACAGAATTAGACCTGCAGTTGTACTCTCTCCAACAGAATTGTACAGAAATACTCGGTGAAAAGTGGGATGTCCAGGCTTTTACAGCAATTGTAGAGTAAAAAGATCACCAGGATAGTGAAATTTTATACTTCACTATATATTCAGATAAAAAGCTATATTTACAGCAATTGTATGTATGTATGTACGTATGTATCAACCCAAGTACTGACTCATGGGCATCCAGTTCATGAATAGAAAAGATTAATGTTCCAGTTAAAGGATTGGAAGAAATTATGCTAGTTACCTTTGGAAGAAATTATGCTAGTTACCTTTCGAAGCAAAAGGACCAACTTTGGGATTGAATCTGATGCCTTTACTTATAGGCATTCCTCCTTTTAAAATTGAAGGTAACAAAATGAATCATTGAAGCATCAAAAGAACCACTTACTCCATGTACAGACAAAATAGAGAGCATTTGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTACAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTGCACCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTGAATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAGTCGCACGGTGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACCTGGCATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCTCCCAGAGTCAGCACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGACAACAGCGCCGAGGTGGCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGATCTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTGTGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAGAGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCTGCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGGGAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCACGCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGGCAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGATGGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGGCGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGATGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTGGCCACGGCGGA]




>consensus_7514#0
AAAATACGGTTGTTGCTGCAAACGTTAATAGGTACATGAAGTCTTGAACAAAAAATAGTC
TCCAAACCTAAACCATCCTACCATGTTCATTTCGGAGTTAATAGGTACAGACATCTGAAC
AAATAGAAAATTTGATTAGATAGGGTATTCAATTGAACCTGGCTTTCTAGCAGCAAAATG
AAAAGAAAATGACATTTAATTGAATATGTACTTGCAGCTCTAGAATGAAAATATATTCAA
TTGAACATGTCTTTTAGCAGCAAAATCGAATCGTTGCATCAAGTGCAAGTTGGGTGAGCT
GCTCAAAAGCAAAATGGAACAGCTGGCCTCCTTGATTTTACATCCTTACTTTCCTGAAGA
AAAAAAATGATCCTTTTATTTTACTATATATTCATAGATCAAGCCAAAATTTGGTTAAAT
CAAAATCTACCTTTTTAGCACACAGAATTAGACCTGCAGTTGTACTCTCTCCAACAGAAT
TGTACAGAAATACTCGGTGAAAAGTGGGATGTCCAGGCTTTTACAGCAATTGTAGAGTAA
AAAGATCACCAGGATAGTGAAATTTTATACTTCACTATATATTCAGATAAAAAGCTATAT
TTACAGCAATTGTATGTATGTATGTACGTATGTATCAACCCAAGTACTGACTCATGGGCA
TCCAGTTCATGAATAGAAAAGATTAATGTTCCAGTTAAAGGATTGGAAGAAATTATGCTA
GTTACCTTTGGAAGAAATTATGCTAGTTACCTTTCGAAGCAAAAGGACCAACTTTGGGAT
TGAATCTGATGCCTTTACTTATAGGCATTCCTCCTTTTAAAATTGAAGGTAACAAAATGA
ATCATTGAAGCATCAAAAGAACCACTTACTCCATGTACAGACAAAATAGAGAGCATTTGA
TATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTA
CAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAA
CCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTC
CAGCCTGCAACTGCACCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTG
AATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAG
TCGCACGGTGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACCTGGCATCGGGCA
CTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCTCCCAGAGTC
AGCACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAGGTCGTGTATC
CCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGACAACAGCGCCGAGGTGGCGTGGCCACA
ATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGATCTGAGGCTTCG
GGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTGTGGGGATTGCC
GGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAGAGGATTGAGGA
GCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCTGCCTCTCACAC
CCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGGGAGAAGGCGGC
GACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCACGCCCGCGGTGC
GAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGGCAAGCGGTGGA
GAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGATGGGGCCGGCCG
CGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGGCGGACGGAGAA
GAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGATGCGTGGCGGC
AGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTGGCCACGGCGGA

consensusID : consensus_7514#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1047
fasta sequence 
                              [TGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTACAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTGGCATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCTCCCAGAGTCAGCACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGACAACAGCGCCGAGGTGGCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGATCTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTGTGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAGAGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCTGCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGGGAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCACGCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGGCAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGATGGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGGCGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGATGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTGGCCACGGCGGAT]

[-] EMBL AK108960             [TGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTACAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTGGCATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCTCCCAGAGTCAGCACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGACAACAGCGCCGAGGTGGCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGATCTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTGTGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAGAGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCTGCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGGGAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCACGCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGGCAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGATGGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGGCGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGATGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTGGCCACGGCGGAT]




>consensus_7514#1
TGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATA
TTACAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCG
AAACCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACA
TTCCAGCCTGCAACTGGCATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATC
TACACTAGATGTCTTCTCCCAGAGTCAGCACCACGCCAGGCTCGGCTACAGAGGCAGAAG
TGCACGCTGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGAGAGGGTATGGAC
AACAGCGCCGAGGTGGCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGC
GGCATGAGCGTAGATCTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACA
AAAGTGGCAGGGGTGTGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATC
GAGGACTTGCTATAGAGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGC
ATCCGACGGCGATCTGCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGG
CGAGCGGTAGAGAGGGAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTC
TCTCCGGCCTCTCACGCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGC
AGCGGCGGGGTAGGGCAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCG
TCGCACATGAGGGATGGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGG
GACCTGCTCCGGCGGCGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAAT
CCGGAGAGAGGAGGATGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCG
CAGCGTATGGAGCTGGCCACGGCGGAT

consensusID : consensus_7514#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 683
fasta sequence 
                              [TTTTTTTTTTTTTTTTTTTTTTTTAGAGAGCATTTGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAAC-ATGTCCAGCTGGATACTATATTACAAAG-CAAAATAACAAC-GGGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTG-GGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTACCCCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTGAATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAGTCGCACGGGGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACTGGACAGAGGCCGCATCGGGCACTGGACAGAGGCCGCANCAAGAGGTCGAGCCATCTACACCAGATGTCTTTTCCCGGAGTCNNGCACCATGCCAGCTCGGCTACAGAGGCAGAAGTGCACGCCGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGGAAAGGGTATGGACAACAGCGCCNAGGGTGCGTGGCCACAATTCCATGGCAGGGAGTCCACATGGACGGCNGCTGCATGAGCGGAAATCTGAAGTTTCGGCCTCAGCAGAAAAGGATGTTGACAACGCCAACAAAG]

[+] EMBL CA760120             [TTTTTTTTTTTTTTTTTTTTTTTTAGAGAGCATTTGATATTTATTTGATGTATTCTTCCATAGCTGGCCAAAAC ATGTCCAGCTGGATACTATATTACAAAG CAAAATAACAAC GGGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTG GGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTACCCCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTGAATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAGTCGCACGGGGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACTGGACAGAGGCCGCATCGGGCACTGGACAGAGGCCGCANCAAGAGGTCGAGCCATCTACACCAGATGTCTTTTCCCGGAGTCNNGCACCATGCCAGCTCGGCTACAGAGGCAGAAGTGCACGCCGACCTCAGGTCGTGTATCCCGGGCTTCGGGCTCAGGCGGGAAAGGGTATGGACAACAGCGCCNAGGGTGCGTGGCCACAATTCCATGGCAGGGAGTCCACATGGACGGCNGCTGCATGAGCGGAAATCTGAAGTTTCGGCCTCAGCAGAAAAGGATGTTGACAACGCCAACAAAG]
[-] EMBL BQ907446             [              TTTTTTTTTTANAGAGCATTTGATATTTA TTGATGTATTCTTCCATA CTGGCCAAAACTATGTCCAGCTGGATACTATATTACAAAGTCAAAATAACAACTGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGTGGAATGCTCCCAATCATCACGATGTGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_7514#2
TTTTTTTTTTTTTTTTTTTTTTTTAGAGAGCATTTGATATTTATTTGATGTATTCTTCCA
TAGCTGGCCAAAACATGTCCAGCTGGATACTATATTACAAAGCAAAATAACAACGGGGAA
TATCACCAACATGATTTGAACCCCAAGGAGTTCGAAACCAATACCAATCTGTCCTTGGGA
ATGCTCCCAATCATCACGATGTGGTCGATCCACATTCCAGCCTGCAACTACCCCAAAACA
CATAAACACAAGAATGAGAGCAGAAACATACATCTTGAATCATGCCGGACCAAACCAAAA
CCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAGTCGCACGGGGCAAAGATACCGGC
CGCAGGTTGCTGGCTGCTGGGTACTGGACAGAGGCCGCATCGGGCACTGGACAGAGGCCG
CANCAAGAGGTCGAGCCATCTACACCAGATGTCTTTTCCCGGAGTCNNGCACCATGCCAG
CTCGGCTACAGAGGCAGAAGTGCACGCCGACCTCAGGTCGTGTATCCCGGGCTTCGGGCT
CAGGCGGGAAAGGGTATGGACAACAGCGCCNAGGGTGCGTGGCCACAATTCCATGGCAGG
GAGTCCACATGGACGGCNGCTGCATGAGCGGAAATCTGAAGTTTCGGCCTCAGCAGAAAA
GGATGTTGACAACGCCAACAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7514#0      AAAATACGGTTGTTGCTGCAAACGTTAATAGGTACATGAAGTCTTGAACAAAAAATAGTC 60
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TCCAAACCTAAACCATCCTACCATGTTCATTTCGGAGTTAATAGGTACAGACATCTGAAC 120
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      AAATAGAAAATTTGATTAGATAGGGTATTCAATTGAACCTGGCTTTCTAGCAGCAAAATG 180
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      AAAAGAAAATGACATTTAATTGAATATGTACTTGCAGCTCTAGAATGAAAATATATTCAA 240
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TTGAACATGTCTTTTAGCAGCAAAATCGAATCGTTGCATCAAGTGCAAGTTGGGTGAGCT 300
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GCTCAAAAGCAAAATGGAACAGCTGGCCTCCTTGATTTTACATCCTTACTTTCCTGAAGA 360
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      AAAAAAATGATCCTTTTATTTTACTATATATTCATAGATCAAGCCAAAATTTGGTTAAAT 420
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      CAAAATCTACCTTTTTAGCACACAGAATTAGACCTGCAGTTGTACTCTCTCCAACAGAAT 480
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TGTACAGAAATACTCGGTGAAAAGTGGGATGTCCAGGCTTTTACAGCAATTGTAGAGTAA 540
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      AAAGATCACCAGGATAGTGAAATTTTATACTTCACTATATATTCAGATAAAAAGCTATAT 600
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TTACAGCAATTGTATGTATGTATGTACGTATGTATCAACCCAAGTACTGACTCATGGGCA 660
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TCCAGTTCATGAATAGAAAAGATTAATGTTCCAGTTAAAGGATTGGAAGAAATTATGCTA 720
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GTTACCTTTGGAAGAAATTATGCTAGTTACCTTTCGAAGCAAAAGGACCAACTTTGGGAT 780
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TGAATCTGATGCCTTTACTTATAGGCATTCCTCCTTTTAAAATTGAAGGTAACAAAATGA 840
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      ATCATTGAAGCATCAAAAGAACCACTTACTCCATGTACAGACAAAATAGAGAGCATTTGA 900
consensus_7514#1      ---------------------------------------------------------TGA 3
consensus_7514#2      -----------------------TTTTTTTTTTTTTTTTTTTTTTTTAGAGAGCATTTGA 37
                                                                               ***

consensus_7514#0      TATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTA 960
consensus_7514#1      TATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTA 63
consensus_7514#2      TATTTATTTGATGTATTCTTCCATAGCTGGCCAAAACATGTCCAGCTGGATACTATATTA 97
                      ************************************************************

consensus_7514#0      CAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAA 1020
consensus_7514#1      CAAAGCAAAATAACAACGTGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAA 123
consensus_7514#2      CAAAGCAAAATAACAACGGGGAATATCACCAACATGATTTGAACCCCAAGGAGTTCGAAA 157
                      ****************** *****************************************

consensus_7514#0      CCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTC 1080
consensus_7514#1      CCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTC 183
consensus_7514#2      CCAATACCAATCTGTCCTTGGGAATGCTCCCAATCATCACGATGTGGTCGATCCACATTC 217
                      ************************************************************

consensus_7514#0      CAGCCTGCAACTGCACCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTG 1140
consensus_7514#1      CAGCCTGCAACTG----------------------------------------------- 196
consensus_7514#2      CAGCCTGCAACTACCCCAAAACACATAAACACAAGAATGAGAGCAGAAACATACATCTTG 277
                      ************                                                

consensus_7514#0      AATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAG 1200
consensus_7514#1      ------------------------------------------------------------
consensus_7514#2      AATCATGCCGGACCAAACCAAAACCAAAAGTAAAGATTTCCAATAGTTGTACAAAATCAG 337
                                                                                  

consensus_7514#0      TCGCACGGTGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACCTG---------G 1251
consensus_7514#1      -----------------------------------------------------------G 197
consensus_7514#2      TCGCACGGGGCAAAGATACCGGCCGCAGGTTGCTGGCTGCTGGGTACTGGACAGAGGCCG 397
                                                                                 *

consensus_7514#0      CATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCT 1311
consensus_7514#1      CATCGGGCACTGGACAGAGGCCGCAGCAAGAGGTCGAGCCATCTACACTAGATGTCTTCT 257
consensus_7514#2      CATCGGGCACTGGACAGAGGCCGCANCAAGAGGTCGAGCCATCTACACCAGATGTCTTTT 457
                      ************************* ********************** ********* *

consensus_7514#0      CCCAGAGTCAG-CACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAG 1370
consensus_7514#1      CCCAGAGTCAG-CACCACGCCAGGCTCGGCTACAGAGGCAGAAGTGCACGCTGACCTCAG 316
consensus_7514#2      CCCGGAGTCNNGCACCATGCCAG-CTCGGCTACAGAGGCAGAAGTGCACGCCGACCTCAG 516
                      *** *****   ***** ***** *************************** ********

consensus_7514#0      GTCGTGTATCCCGGGCTTCGGGCTCAGGCGG-AGAGGGTATGGACAACAGCGCCGAGGTG 1429
consensus_7514#1      GTCGTGTATCCCGGGCTTCGGGCTCAGGCGG-AGAGGGTATGGACAACAGCGCCGAGGTG 375
consensus_7514#2      GTCGTGTATCCCGGGCTTCGGGCTCAGGCGGGAAAGGGTATGGACAACAGCGCCNAGGGT 576
                      ******************************* * ******************** ***  

consensus_7514#0      GCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGAT 1489
consensus_7514#1      GCGTGGCCACAATTCCATGGCAGGGAGTCACACAATGACGGCGGCGGCATGAGCGTAGAT 435
consensus_7514#2      GCGTGGCCACAATTCCATGGCAGGGAGTC-CACATGGACGGCNGCTGCATGAGCGGAAAT 635
                      ***************************** ****  ****** ** ********* * **

consensus_7514#0      CTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTG 1549
consensus_7514#1      CTGAGGCTTCGGGCTCGGGCAGAGAGGATGTTGACGACGGCGACAAAAGTGGCAGGGGTG 495
consensus_7514#2      CTGAAGTTTCGGCCTCAGCAGAAAAGGATGTTGACAACGCCAACAAAG------------ 683
                      **** * ***** *** *    * *********** *** * *****             

consensus_7514#0      TGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAG 1609
consensus_7514#1      TGGGGATTGCCGGCTTGCCGCGGAGGATCCGAGGAGGCGCGGATCGAGGACTTGCTATAG 555
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      AGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCT 1669
consensus_7514#1      AGGATTGAGGAGCACGGGGTATAGGGAGAAGGCGGCGGTGGAGGCATCCGACGGCGATCT 615
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGG 1729
consensus_7514#1      GCCTCTCACACCCGCGGCGCGAGTACGCGAGGAGGCGAGGTAGGGCGAGCGGTAGAGAGG 675
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCAC 1789
consensus_7514#1      GAGAAGGCGGCGACAGCGGTAGAGGTGGCCGACGGCGACCTCGTCTCTCCGGCCTCTCAC 735
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGG 1849
consensus_7514#1      GCCCGCGGTGCGAGTACAGGGGAGGCGAGCGCGTGAGGAGGCGGCAGCGGCGGGGTAGGG 795
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      CAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGAT 1909
consensus_7514#1      CAAGCGGTGGAGAAGAGGGAGAAGGCGGCGGCGGATTACGGCTCGTCGCACATGAGGGAT 855
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGG 1969
consensus_7514#1      GGGGCCGGCCGCGACGGATGGTAGGATCCAACGGCGGCGGAATGGGACCTGCTCCGGCGG 915
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      CGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGA 2029
consensus_7514#1      CGGACGGAGAAGAAGCGGCTCCGGCGAGGATGCGGCGGCAGTAATCCGGAGAGAGGAGGA 975
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      TGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTG 2089
consensus_7514#1      TGCGTGGCGGCAGTAATCCGGAGTGAGGAGGAGGAGCGCCGGCCGCAGCGTATGGAGCTG 1035
consensus_7514#2      ------------------------------------------------------------
                                                                                  

consensus_7514#0      GCCACGGCGGA- 2100
consensus_7514#1      GCCACGGCGGAT 1047
consensus_7514#2      ------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)