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Oryza sativa
cluster # 7524 cluster # 7524       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7524#0 length = 2126 sequences # 2  
consensus_7524#1 length = 1396 sequences # 1  
consensus_7524#2 length = 597 sequences # 1  

consensusID : consensus_7524#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2126
fasta sequence
                              [CGTGACGAAAGAGCGTGGCGCCCGGGTCGAGGCGCGCCGTCTCCCGGAACATGAAGGCGTTGATGTCGTCGCCGAGGCGGTCCTGGTAGAAGCTGCCGTGGAGCATCTCGTTGTTGACGTCGTAGTGCGGGAACCTGCCGGCGTAGCGGGTGAGGAGGCCGGTGAGGCGGCCCTGCACGGCGGCCGTCAGCTGGTCGTGGTCGAGCCCCTTGATCCACTGCTGCACCACGTTGTCGACGGCCCAGAAGATGCAGTGCCCGCGCACCGGCTTGCCGTAGCGGTCGCAGAAGTCGAGCAGCGCGTCGGCGTCGGCGTAGTTGAGCTGCCCCTGCTGCGCCTCCGTCCAGTACCACTTGAGCTCGTTCTCGAACACCGCCCAGTCGAAGTGCTTCGTGAAGAAGTCCACGAACGCCGGGTTCTGGATCACCCCGCCATTGATGCACGCCCCGAACGGGAAGCTGCTGTCCATCTGCATCACGCGTACGGACGCCCCCGATATGCTCCCCGCCCCACCGAACTTGAGAACGACGTCCCGCTTCCGCACCTTGTCAGTCTTCTTCCTGAGTTTCCTGAACCGTGCCCTGCGATCCGTGGCGAAGATTTGGAGATCCATCACCTTCACGTCGACGCCGTCGGGCGCGCCCTGGACGAACACCGTCGCGCCGCACGGGCTCGCCTTGAGCCGGAACGCGCCCTTGATCTCCGTCCACCTGCCGGCCTGGGCGCACACCGCGCCGCCCTCGACGACGCACTCGTCGTCGTCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCAGTCGCCGAGGCTGATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGGCGCGGCCCGCCGCGAGGATGTACCGGCCGCTGGGCTTGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACGACTTATTCGCCGTGGATTGGTGATTTGCGGTGGCGAGTCACGGCGATCGGACGAGACCGTATATAAAGGTCCGATCGGTCGGCCGTCAAAATCATTGCGACATAGTTCTAAAGCGTACCGACCGCCAAAAATATTGTGCAAACTCGAAGCAACCACCACCACAGCGAGAGACGACGACCTCTGCTTCTCCTTCTCTCTCTGGCTTTGCTGCGTTTGAGTAACAGTAAAGCTTGGGCAAGCAAGGCTGCAATTGCATGCGTGGCCGTCTCGTTGGGTCCAGGGAGCTGTGTGACTGGCAAAGTGGGACCCACATGAGACGTGCCCCACATGTCAGAGGGGGGTGCTTTGAGATAAGGTGTTCTTTTTAGTAAGCATCATTACCGGCACATCCAAGCATGTGTCAAGGCCGGGTCCGTGCTTTTCTTGGCTTTGGGAAGAGACAACTAGAAGCGATTTGTTTAGTCGCCGGTAACGCCAAACGTGGAATCATTAGGGCACAAACCAATCGGAGATTAGATTCGACATGGACTTTTTCTGTCCACGATAATCTCTCGTTTTTTTAGCACTGTTCGTTAGGAGGACTGAACTCGTCATGTACTGCTAATCTCATCATGCTACTGTGTTTGCTAATTAATTTACCGGTAATTAAGCAGAGGGCGCCTAGAGCTAGCCGGAATTGAGAACTTGGGATAAGAGGAGAGGAGAGTGCGACGGCGGCGTATCCAAGTTGCAGGCAGGCAGCCGCCCCACGACATGACTACGACGACGACGACGACGATAATGGAGGATCAATTAGGCGTAGGGAGTGGAAGTACGAAGCTTCAAGACACAAACATCGGCTACTAAAACGTGAGGTTTGGTGACGGATCGTGTGGCTGTCAATCCAATGAAGGAACTTTGTACTTCATAGCCGCAGGTCCATATGAACATGGATCCTTCTCGAATCTTTGTTTGAATCGATCGCATGATACTCTCTTTGCTACGAAAATACGCAATGGAAATGTACA]

[-] EMBL CB647597             [CGTGACGAAAGAGCGTGGCGCCCGGGTCGAGGCGCGCCGTCTCCCGGAACATGAAGGCGTTGATGTCGTCGCCGAGGCGGTCCTGGTAGAAGCTGCCGTGGAGCATCTCGTTGTTGACGTCGTAGTGCGGGAACCTGCCGGCGTAGCGGGTGAGGAGGCCGGTGAGGCGGCCCTGCACGGCGGCCGTCAGCTGGTCGTGGTCGAGCCCCTTGATCCACTGCTGCACCACGTTGTCGACGGCCCAGAAGATGCAGTGCCCGCGCACCGGCTTGCCGTAGCGGTCGCAGAAGTCGAGCAGCGCGTCGGCGTCGGCGTAGTTGAGCTGCCCCTGCTGCGCCTCCGTCCAGTACCACTTGAGCTCGTTCTCGAACACCGCCCAGTCGAAGTGCTTCGTGAAGAAGTCCACGAACGCCGGGTTCTGGATCACCCCGCCATTGATGCACGCCCCGAACGGGAAGCTGCTGTCCATCTGCATCACGCGTACGGACGCCCCCGATATGCTCCCCGCCCCACCGAACTTGAGAACGACGTCCCGCTTCCGCACCTTGTCAGTCTTCTTCCTGAGTTTCCTGAACCGTGCCCTGCGATCCGTGGCGAAGATTTGGAGATCCATCACCTTCACGTCGACGCCGTCGGGCGCGCCCTGGACGAACACCGTCGCGCCGCACGGGCTCGCCTTGAGCCGGAACGCGCCCTTGATCTCCGTCCACCTGCCGGCCTGGGCGCACACCGCGCCGCCCTCGACGACGCACTCGTCGTCGTCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCAGTCGCCGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK119507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCACCTGCCGGCCTGGGCGCACACCGCGCCGCCCTCGACGACGCACTCGTCGTCGTCGTCGAGGCGGGGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCCGTCGCCGAGGCTGATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGGCGCGGCCCGCCGCGAGGATGTACCGGCCGCTGGGCTTGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACGACTTATTCGCCGTGGATTGGTGATTTGCGGTGGCGAGTCACGGCGATCGGACGAGACCGTATATAAAGGTCCGATCGGTCGGCCGTCAAAATCATTGCGACATAGTTCTAAAGCGTACCGACCGCCAAAAATATTGTGCAAACTCGAAGCAACCACCACCACAGCGAGAGACGACGACCTCTGCTTCTCCTTCTCTCTCTGGCTTTGCTGCGTTTGAGTAACAGTAAAGCTTGGGCAAGCAAGGCTGCAATTGCATGCGTGGCCGTCTCGTTGGGTCCAGGGAGCTGTGTGACTGGCAAAGTGGGACCCACATGAGACGTGCCCCACATGTCAGAGGGGGGTGCTTTGAGATAAGGTGTTCTTTTTAGTAAGCATCATTACCGGCACATCCAAGCATGTGTCAAGGCCGGGTCCGTGCTTTTCTTGGCTTTGGGAAGAGACAACTAGAAGCGATTTGTTTAGTCGCCGGTAACGCCAAACGTGGAATCATTAGGGCACAAACCAATCGGAGATTAGATTCGACATGGACTTTTTCTGTCCACGATAATCTCTCGTTTTTTTAGCACTGTTCGTTAGGAGGACTGAACTCGTCATGTACTGCTAATCTCATCATGCTACTGTGTTTGCTAATTAATTTACCGGTAATTAAGCAGAGGGCGCCTAGAGCTAGCCGGAATTGAGAACTTGGGATAAGAGGAGAGGAGAGTGCGACGGCGGCGTATCCAAGTTGCAGGCAGGCAGCCGCCCCACGACATGACTACGACGACGACGACGACGATAATGGAGGATCAATTAGGCGTAGGGAGTGGAAGTACGAAGCTTCAAGACACAAACATCGGCTACTAAAACGTGAGGTTTGGTGACGGATCGTGTGGCTGTCAATCCAATGAAGGAACTTTGTACTTCATAGCCGCAGGTCCATATGAACATGGATCCTTCTCGAATCTTTGTTTGAATCGATCGCATGATACTCTCTTTGCTACGAAAATACGCAATGGAAATGTACA]


>consensus_7524#0 CGTGACGAAAGAGCGTGGCGCCCGGGTCGAGGCGCGCCGTCTCCCGGAACATGAAGGCGT TGATGTCGTCGCCGAGGCGGTCCTGGTAGAAGCTGCCGTGGAGCATCTCGTTGTTGACGT CGTAGTGCGGGAACCTGCCGGCGTAGCGGGTGAGGAGGCCGGTGAGGCGGCCCTGCACGG CGGCCGTCAGCTGGTCGTGGTCGAGCCCCTTGATCCACTGCTGCACCACGTTGTCGACGG CCCAGAAGATGCAGTGCCCGCGCACCGGCTTGCCGTAGCGGTCGCAGAAGTCGAGCAGCG CGTCGGCGTCGGCGTAGTTGAGCTGCCCCTGCTGCGCCTCCGTCCAGTACCACTTGAGCT CGTTCTCGAACACCGCCCAGTCGAAGTGCTTCGTGAAGAAGTCCACGAACGCCGGGTTCT GGATCACCCCGCCATTGATGCACGCCCCGAACGGGAAGCTGCTGTCCATCTGCATCACGC GTACGGACGCCCCCGATATGCTCCCCGCCCCACCGAACTTGAGAACGACGTCCCGCTTCC GCACCTTGTCAGTCTTCTTCCTGAGTTTCCTGAACCGTGCCCTGCGATCCGTGGCGAAGA TTTGGAGATCCATCACCTTCACGTCGACGCCGTCGGGCGCGCCCTGGACGAACACCGTCG CGCCGCACGGGCTCGCCTTGAGCCGGAACGCGCCCTTGATCTCCGTCCACCTGCCGGCCT GGGCGCACACCGCGCCGCCCTCGACGACGCACTCGTCGTCGTCGTCGAGGCGGAGGTTGA CGCGCACCGGGTGGCTCCCCTCGGCGCAGTCGCCGAGGCTGATCCACCCGGCCACGCGGT ACGTGACGCGGGGCTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGG CGCGGCCCGCCGCGAGGATGTACCGGCCGCTGGGCTTGTAGTCGTCGGCCACCGTGTTGA TGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGC CGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGCCATGAT CGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACGACTTATTCGCCGTGGATTGGT GATTTGCGGTGGCGAGTCACGGCGATCGGACGAGACCGTATATAAAGGTCCGATCGGTCG GCCGTCAAAATCATTGCGACATAGTTCTAAAGCGTACCGACCGCCAAAAATATTGTGCAA ACTCGAAGCAACCACCACCACAGCGAGAGACGACGACCTCTGCTTCTCCTTCTCTCTCTG GCTTTGCTGCGTTTGAGTAACAGTAAAGCTTGGGCAAGCAAGGCTGCAATTGCATGCGTG GCCGTCTCGTTGGGTCCAGGGAGCTGTGTGACTGGCAAAGTGGGACCCACATGAGACGTG CCCCACATGTCAGAGGGGGGTGCTTTGAGATAAGGTGTTCTTTTTAGTAAGCATCATTAC CGGCACATCCAAGCATGTGTCAAGGCCGGGTCCGTGCTTTTCTTGGCTTTGGGAAGAGAC AACTAGAAGCGATTTGTTTAGTCGCCGGTAACGCCAAACGTGGAATCATTAGGGCACAAA CCAATCGGAGATTAGATTCGACATGGACTTTTTCTGTCCACGATAATCTCTCGTTTTTTT AGCACTGTTCGTTAGGAGGACTGAACTCGTCATGTACTGCTAATCTCATCATGCTACTGT GTTTGCTAATTAATTTACCGGTAATTAAGCAGAGGGCGCCTAGAGCTAGCCGGAATTGAG AACTTGGGATAAGAGGAGAGGAGAGTGCGACGGCGGCGTATCCAAGTTGCAGGCAGGCAG CCGCCCCACGACATGACTACGACGACGACGACGACGATAATGGAGGATCAATTAGGCGTA GGGAGTGGAAGTACGAAGCTTCAAGACACAAACATCGGCTACTAAAACGTGAGGTTTGGT GACGGATCGTGTGGCTGTCAATCCAATGAAGGAACTTTGTACTTCATAGCCGCAGGTCCA TATGAACATGGATCCTTCTCGAATCTTTGTTTGAATCGATCGCATGATACTCTCTTTGCT ACGAAAATACGCAATGGAAATGTACA



consensusID : consensus_7524#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1396
fasta sequence
                              [ATTGGTCGTTTATTTACTGCAAATCTGTAGGTAGCAAATACAAATCCAATACCCTCTTTTACGGTTTAAATTACCACACACGGACACGCCAAGGCCCTATAATCACAACATAAAACAACATCACATCTCTTCTGATCGATCTAAAAAATAATCCCAATCCCAATATAATCCGTATATATGCAATGCACTTAACCGTTCTATGTACTACACGTATGAACGTATGAATCCCCCCCGATGATGGAGTTGGCTGGCTAGAGATCCATGTCGAGCACGAGTGGGCCATCTCCCTTGCCGACGTCGAACTGCTGGTACTTCATCTCGCCGGCGCCGGTGGTGAGCTGCACGACGTACTTGCCGTGGAACCCCCTGAACTTGAAGTGGCCGCTGCCGTCGACCTGCCCCCGCGCGTGCGACGTCCACTCCTGCCGGAGACCCACGTAGCGGTGGCCGGCCTCGTTGAGCTTCCCGTCGGCGTCGACGAGGTGCGCGTGGGAGCGCCACATGTTGCCCTGCATGAACCCCCACAGCATGATCCCCTCCACCGCCGGGTGCGCGAACGCCTCCCGGAGCACGATCTCCAGGTCGTCGGCGCGCACCGCCTCGTCCGCCGCCGACACGTCCAGCTCCGTGATCCACACGGGGAGACCCGTGACGGCGAGCCTGTCCAGCGCGTCGCAGATCACGTCGCCCACCGGGTGCGTCACGTGGCCCTGCACGCCGATGCCGCCCACCGCCGCGCCGCGCTTCTGCAGGTCGGTGACCAGCTCCACGTACCGCTCCGGCGTCGCGTTCGGGTCGTTGGCGCTCTCCACGTTGTAGTCGTTGACGAACAGCGCCGGCGACGGGTCCATCTGCGCCGTCTCCCGGAACATGCGCGCGTTGATGTCGTCGCCCAGCCTCTGCTGGAAGAAGGCGCCGTGGAGCATCTCGTTGTTCACCTCGTAGTGCGGGAACCTGCCGCCGTACCGCGTCACGAGGCTGCGGAGGCGGCCCTCCACGGCGGCGCGGAGCTGATCGCCGTTGAGCGCGCGGACCCACGGCTGCACGACGTTCTCGACGGCCCAGAAGATGCAGTGGCCGCGCACGGGCTTGCCGTGGCGGTCGCAGAAGGCGATGAGCTCGTCGGCGTCGGAGTAGCTGACCTGCCCCTGCACCGCCTCGGTGTAGTACCACTTGAGCTCGTTCTCGAGCACCGCCCAGTCGAAGTGCTTGGTGAAGAAGTCCACGAACGCCGGGTTCTGGATCGCCGTCTTGTTGATGCACGCGCCGATGGGGAAGCTGTTCTCCACCTGCACCACGCGGATCGCCGTGCCGCCCGTTCGCCGCCCCAGCTTGAGCACCACATCACGCTTGCGCACCTATGTAGTAGTTTTTGCAGAAATTTCGAGTGTTATGA]

[-] EMBL AK063402             [ATTGGTCGTTTATTTACTGCAAATCTGTAGGTAGCAAATACAAATCCAATACCCTCTTTTACGGTTTAAATTACCACACACGGACACGCCAAGGCCCTATAATCACAACATAAAACAACATCACATCTCTTCTGATCGATCTAAAAAATAATCCCAATCCCAATATAATCCGTATATATGCAATGCACTTAACCGTTCTATGTACTACACGTATGAACGTATGAATCCCCCCCGATGATGGAGTTGGCTGGCTAGAGATCCATGTCGAGCACGAGTGGGCCATCTCCCTTGCCGACGTCGAACTGCTGGTACTTCATCTCGCCGGCGCCGGTGGTGAGCTGCACGACGTACTTGCCGTGGAACCCCCTGAACTTGAAGTGGCCGCTGCCGTCGACCTGCCCCCGCGCGTGCGACGTCCACTCCTGCCGGAGACCCACGTAGCGGTGGCCGGCCTCGTTGAGCTTCCCGTCGGCGTCGACGAGGTGCGCGTGGGAGCGCCACATGTTGCCCTGCATGAACCCCCACAGCATGATCCCCTCCACCGCCGGGTGCGCGAACGCCTCCCGGAGCACGATCTCCAGGTCGTCGGCGCGCACCGCCTCGTCCGCCGCCGACACGTCCAGCTCCGTGATCCACACGGGGAGACCCGTGACGGCGAGCCTGTCCAGCGCGTCGCAGATCACGTCGCCCACCGGGTGCGTCACGTGGCCCTGCACGCCGATGCCGCCCACCGCCGCGCCGCGCTTCTGCAGGTCGGTGACCAGCTCCACGTACCGCTCCGGCGTCGCGTTCGGGTCGTTGGCGCTCTCCACGTTGTAGTCGTTGACGAACAGCGCCGGCGACGGGTCCATCTGCGCCGTCTCCCGGAACATGCGCGCGTTGATGTCGTCGCCCAGCCTCTGCTGGAAGAAGGCGCCGTGGAGCATCTCGTTGTTCACCTCGTAGTGCGGGAACCTGCCGCCGTACCGCGTCACGAGGCTGCGGAGGCGGCCCTCCACGGCGGCGCGGAGCTGATCGCCGTTGAGCGCGCGGACCCACGGCTGCACGACGTTCTCGACGGCCCAGAAGATGCAGTGGCCGCGCACGGGCTTGCCGTGGCGGTCGCAGAAGGCGATGAGCTCGTCGGCGTCGGAGTAGCTGACCTGCCCCTGCACCGCCTCGGTGTAGTACCACTTGAGCTCGTTCTCGAGCACCGCCCAGTCGAAGTGCTTGGTGAAGAAGTCCACGAACGCCGGGTTCTGGATCGCCGTCTTGTTGATGCACGCGCCGATGGGGAAGCTGTTCTCCACCTGCACCACGCGGATCGCCGTGCCGCCCGTTCGCCGCCCCAGCTTGAGCACCACATCACGCTTGCGCACCTATGTAGTAGTTTTTGCAGAAATTTCGAGTGTTATGA]


>consensus_7524#1 ATTGGTCGTTTATTTACTGCAAATCTGTAGGTAGCAAATACAAATCCAATACCCTCTTTT ACGGTTTAAATTACCACACACGGACACGCCAAGGCCCTATAATCACAACATAAAACAACA TCACATCTCTTCTGATCGATCTAAAAAATAATCCCAATCCCAATATAATCCGTATATATG CAATGCACTTAACCGTTCTATGTACTACACGTATGAACGTATGAATCCCCCCCGATGATG GAGTTGGCTGGCTAGAGATCCATGTCGAGCACGAGTGGGCCATCTCCCTTGCCGACGTCG AACTGCTGGTACTTCATCTCGCCGGCGCCGGTGGTGAGCTGCACGACGTACTTGCCGTGG AACCCCCTGAACTTGAAGTGGCCGCTGCCGTCGACCTGCCCCCGCGCGTGCGACGTCCAC TCCTGCCGGAGACCCACGTAGCGGTGGCCGGCCTCGTTGAGCTTCCCGTCGGCGTCGACG AGGTGCGCGTGGGAGCGCCACATGTTGCCCTGCATGAACCCCCACAGCATGATCCCCTCC ACCGCCGGGTGCGCGAACGCCTCCCGGAGCACGATCTCCAGGTCGTCGGCGCGCACCGCC TCGTCCGCCGCCGACACGTCCAGCTCCGTGATCCACACGGGGAGACCCGTGACGGCGAGC CTGTCCAGCGCGTCGCAGATCACGTCGCCCACCGGGTGCGTCACGTGGCCCTGCACGCCG ATGCCGCCCACCGCCGCGCCGCGCTTCTGCAGGTCGGTGACCAGCTCCACGTACCGCTCC GGCGTCGCGTTCGGGTCGTTGGCGCTCTCCACGTTGTAGTCGTTGACGAACAGCGCCGGC GACGGGTCCATCTGCGCCGTCTCCCGGAACATGCGCGCGTTGATGTCGTCGCCCAGCCTC TGCTGGAAGAAGGCGCCGTGGAGCATCTCGTTGTTCACCTCGTAGTGCGGGAACCTGCCG CCGTACCGCGTCACGAGGCTGCGGAGGCGGCCCTCCACGGCGGCGCGGAGCTGATCGCCG TTGAGCGCGCGGACCCACGGCTGCACGACGTTCTCGACGGCCCAGAAGATGCAGTGGCCG CGCACGGGCTTGCCGTGGCGGTCGCAGAAGGCGATGAGCTCGTCGGCGTCGGAGTAGCTG ACCTGCCCCTGCACCGCCTCGGTGTAGTACCACTTGAGCTCGTTCTCGAGCACCGCCCAG TCGAAGTGCTTGGTGAAGAAGTCCACGAACGCCGGGTTCTGGATCGCCGTCTTGTTGATG CACGCGCCGATGGGGAAGCTGTTCTCCACCTGCACCACGCGGATCGCCGTGCCGCCCGTT CGCCGCCCCAGCTTGAGCACCACATCACGCTTGCGCACCTATGTAGTAGTTTTTGCAGAA ATTTCGAGTGTTATGA



consensusID : consensus_7524#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence
                              [TCGTGCTACTCCGGATTTCCGAACGCGTACCCGCGGTCCGGGTGAAGATTAGGAGATCCATCCATGTTAATCGACGCCGTCGGGCGCGCCCTGGACAAAACTGTTCGCGCCGCACAGGCTCGCCTTGAGCCGGGGCGCGGCCCTGATCTCCGTCCACCTGCCGGACTGGGCGCACACCGCGCCGCCCTAGACGACGCACTAGTAGTCGTCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCCGTCGCCGAGGCTGATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGGCGCGGCCCGCCGCGAGGATGTACCGGCCGCTGGGCTNGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGTTCACGTCGAAAACCACCCCCTTGGTGCAGGCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACG]

[-] EMBL CA754934             [TCGTGCTACTCCGGATTTCCGAACGCGTACCCGCGGTCCGGGTGAAGATTAGGAGATCCATCCATGTTAATCGACGCCGTCGGGCGCGCCCTGGACAAAACTGTTCGCGCCGCACAGGCTCGCCTTGAGCCGGGGCGCGGCCCTGATCTCCGTCCACCTGCCGGACTGGGCGCACACCGCGCCGCCCTAGACGACGCACTAGTAGTCGTCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCCGTCGCCGAGGCTGATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGGCGCGGCCCGCCGCGAGGATGTACCGGCCGCTGGGCTNGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGTTCACGTCGAAAACCACCCCCTTGGTGCAGGCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACG]


>consensus_7524#2 TCGTGCTACTCCGGATTTCCGAACGCGTACCCGCGGTCCGGGTGAAGATTAGGAGATCCA TCCATGTTAATCGACGCCGTCGGGCGCGCCCTGGACAAAACTGTTCGCGCCGCACAGGCT CGCCTTGAGCCGGGGCGCGGCCCTGATCTCCGTCCACCTGCCGGACTGGGCGCACACCGC GCCGCCCTAGACGACGCACTAGTAGTCGTCGTCGAGGCGGAGGTTGACGCGCACCGGGTG GCTCCCCTCGGCGCCGTCGCCGAGGCTGATCCACCCGGCCACGCGGTACGTGACGCGGGG CTTGAGCGCGCCGGCCACCGCCCGGCGCAGCCCGTCCTCCTCGCCGGCGCGGCCCGCCGC GAGGATGTACCGGCCGCTGGGCTNGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGG CACCTTCTCCGGCTCCTCATTGTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCA GCCGGCGAGCCCGTCCTCCAGCGTGCTGTTCTCGAGCAGGTTCACGTCGAAAACCACCCC CTTGGTGCAGGCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCTGGAACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7524#0      CGTGACGAAAGAGCGTGGCGCCCGGGTCGAGGCGCGCCGTCTCCCGGAACATGAAGGCGT 60
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      TGATGTCGTCGCCGAGGCGGTCCTGGTAGAAGCTGCCGTGGAGCATCTCGTTGTTGACGT 120
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      CGTAGTGCGGGAACCTGCCGGCGTAGCGGGTGAGGAGGCCGGTGAGGCGGCCCTGCACGG 180
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      CGGCCGTCAGCTGGTCGTGGTCGAGCCCCTTGATCCACTGCTGCACCACGTTGTCGACGG 240
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      CCCAGAAGATGCAGTGCCCGCGCACCGGCTTGCCGTAGCGGTCGCAGAAGTCGAGCAGCG 300
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      CGTCGGCGTCGGCGTAGTTGAGCTGCCCCTGCTGCGCCTCCGTCCAGTACCACTTGAGCT 360
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------ATTGGTCGTTTATTTACTGCAAATCTGTAGGTAGCAAATACAAATCCAATACCC 54
                                                                                  

consensus_7524#0      CGTTCTCGAACACCGCCCAGTCGAAGTGCTTCGTGAAGAAGTCCACGAACGCCGGGTTCT 420
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      TCTTTTACGGTTTAAATTACCACACACGGACACGCCAAGGCCCTATAATCACAACATAAA 114
                                                                                  

consensus_7524#0      GGATCACCCCGCCATTGATGCACGCCCCGAACGGGAAGCT-GCTGTCCATCTGCATCACG 479
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ACAACATCACATCTCTTCTGATCGATCTAAAAAATAATCCCAATCCCAATATAATCCGTA 174
                                                                                  

consensus_7524#0      CGTACGGACGCCCCCGATATGCTCCCCGCCCCACCGAACTTGAGAACGACGTCCCGCTTC 539
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      TATATGCAATGCACTTAACCGTTCTATGTACTACACGTATGAACGTATGAATCCCCCCCG 234
                                                                                  

consensus_7524#0      CGCACCTTGTCAGTCTTCTTCCTGAGTTTCCTGAACCGTGCCCTGCGATCCGTGGCGAAG 599
consensus_7524#2      ---------TCGTGCTACTCC--GGATTTCCGAACGCGTACCC-GCGGTCCG-GGTGAAG 47
consensus_7524#1      ATGATGGAGTTGGCTGGCTAGAGATCCATGTCGAGCACGAGTGGGCCATCTCCCTTGCCG 294
                               *       **         *    *          **  **      *  *

consensus_7524#0      ATTTGGAGATCCATCACCTTCACGTCGACGCCGTCGGGCGCGCCCTGGACGAACACCGTC 659
consensus_7524#2      ATTAGGAGATCCATCCATGTTA-ATCGACGCCGTCGGGCGCGCCCTGGACAAAACTGTTC 106
consensus_7524#1      ACGTCGAACTGCTGGTACTTCATCTCGCCGGCGCCGGTGGTGAGCTGCACGACGTACTTG 354
                      *    **  * *       * *  *** ** ** ***  * *  *** ** *      * 

consensus_7524#0      GCGCCGCACGGGCTCGCCTTGAGCCGGAACGCGCCCTTGATCTCCGTCCAC--------- 710
consensus_7524#2      GCGCCGCACAGGCTCGCCTTGAGCCGGGGCGCGGCCCTGATCTCCGTCCAC--------- 157
consensus_7524#1      CCGTGGAACCCCCTGAACTTGAAGTGGCCGCTGCCGTCGACCTGCCCCCGCGCGTGCGAC 414
                       **  * **   **   *****   **     * *   ** ** *  ** *         

consensus_7524#0      -----CTGCCGGCCTGGGCGCACACCGCG----CCGCCCTCGACGACGCACTCGTCGTCG 761
consensus_7524#2      -----CTGCCGGACTGGGCGCACACCGCG----CCGCCCTAGACGACGCACTAGTAGTCG 208
consensus_7524#1      GTCCACTCCTGCCGGAGACCCACGTAGCGGTGGCCGGCCTCGTTGAGCTTCCCGTCGGCG 474
                           ** * *     * * ***   ***    *** *** *  **    *  ** * **

consensus_7524#0      TCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCAGTCGCCGAGGCTG 821
consensus_7524#2      TCGTCGAGGCGGAGGTTGACGCGCACCGGGTGGCTCCCCTCGGCGCCGTCGCCGAGGCTG 268
consensus_7524#1      TCGACGAGGTGCGCGTGGGAGCGCCACATGTTGCCCTGCATGA-ACCCCCAC--AGCATG 531
                      *** ***** *   ** *  ****  *  ** ** *  *  *   *   * *  **  **

consensus_7524#0      ATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCA--CCGCCCG-G 878
consensus_7524#2      ATCCACCCGGCCACGCGGTACGTGACGCGGGGCTTGAGCGCGCCGGCCA--CCGCCCG-G 325
consensus_7524#1      ATCCCCTCCACCGCCGGGTGCGCGAACGCCTCCCGGAGCACGATCTCCAGGTCGTCGGCG 591
                      **** * *  ** *  *** ** **       *  **** **    ***   ** * * *

consensus_7524#0      CGCAGCCCGTCCTCC-TCGCCGGCGCGGCCCGCCGCGAGGAT-GTACCGGCCG--CTGGG 934
consensus_7524#2      CGCAGCCCGTCCTCC-TCGCCGGCGCGGCCCGCCGCGAGGAT-GTACCGGCCG--CTGGG 381
consensus_7524#1      CGCACCGCCTCGTCCGCCGCCGACACGTCCAGCTCCGTGATCCACACGGGGAGACCCGTG 651
                      **** * * ** ***  ***** * ** ** **  ** *      ** **  *  * * *

consensus_7524#0      CTTGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATT 994
consensus_7524#2      CTNGTAGTCGTCGGCCACCGTGTTGATGGTCTCGGTCGGCACCTTCTCCGGCTCCTCATT 441
consensus_7524#1      ACGGCGAGC-CTGTCCAGCGCGTCGCAGATCACGTCGCCCACCGGGTGCGTCACGTGGCC 710
                         *    *   * *** ** ** *  * ** **     ****   * ** * * *    

consensus_7524#0      GTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAG 1054
consensus_7524#2      GTGCACGGACAGCGCCGTGCACTCGCCGACCGCCGCCCAGCCGGCGAGCCCGTCCTCCAG 501
consensus_7524#1      CTGCACGC-CGATGCCGCCCACCGCCGCGCCGCGCTTCTGCAGGTCGGTGACCAGCTCCA 769
                       ******  *   ****  ***   *   ****    * ** **   *         *  

consensus_7524#0      CGTGCTGTTCTCGAGCAG-GCCATGATCGTGGCAGCAGGAGCAGGTGATCGCCGGAGTCT 1113
consensus_7524#2      CGTGCTGTTCTCGAGCAG-GTTCACGTCG-------AAAACCACCCCCTTGGTGCAGGCC 553
consensus_7524#1      CGTACCGCTCCGGCGTCGCGTTCGGGTCGT-------TGGCGCTCTCCACGTTGTAGTCG 822
                      *** * * **  * *  * *      ***                     *  * ** * 

consensus_7524#0      GGAACGACTTATTCGCCGTGGATTGGTG-ATTTGCGGTGGCGA--GTCACGGCGATCGGA 1170
consensus_7524#2      ---ATGATCGTGGCAGCAGGAGCAGGTG-ATCGCCGGAGTCTG--GA-ACG--------- 597
consensus_7524#1      TTGACGAAC--AGCGCCGGCGACGGGTCCATCTGCGCCGTCTCCCGGAACATGCGCGCGT 880
                         * **      *  *       ***  **   **  * *    *  **          

consensus_7524#0      CGAGACCGTATATAAAGGTCCGATCGGTCGGCCGTCAAAATCATTGCGACATAGTTCTAA 1230
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      TGATGTCGTCGCCCAGCCTCTGCTGGAAGAAGGCGCCGTGGAGCATCTCGTTGTTCACCT 940
                                                                                  

consensus_7524#0      AGCGTACCGACCGCCAAAAATATTGTGCAAACTCGAAGCAACCACCACCACAGCGAGAGA 1290
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      CGTAGTGCGGGAACCTGCCGCCGTACCGCGTCACGAGGCTGCGGAGGCGGCCCTCCACGG 1000
                                                                                  

consensus_7524#0      CGACGACCTCTGCTTCTCCTTCTCTCTCTGGCTTTGCTGCGTTTGAGTAACAGTAAAGCT 1350
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      CGGCG--CGGAGCTGATCGCCGTTGAGCGCGCGGACCCACGGCTGCACGACGTTCTCGAC 1058
                                                                                  

consensus_7524#0      TGGGCAAGCAAGGCTGCAATTGCATGCGTGGCCGTCTCGTTGGGTCCAGGGAGCTGTGTG 1410
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      GGCCCAGAAGATGCAGTGGCCGCGCACGGGCTTGCCGTGGCGGTCGCAGAAGGCGATGAG 1118
                                                                                  

consensus_7524#0      ACTGGCAAAGTGGGACCCACATGAGACGTGCCCCACATGTCAGAGGGGGGTGCTTTGAGA 1470
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      CTCGTCGGCGTCGGAGTAGC-TGACCTGCCCCTGCACCGCCTCGGTGTAGTACCACTTGA 1177
                                                                                  

consensus_7524#0      TAAGGTGTTCTTTTTAGTAAGCATCATTACCGGCACATCCAAGCATGTGTCAAGGCCGGG 1530
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      GCTCGTTCTCGAGC-ACCGCCCAGTCGAAGTGCTTGGTGAAGAAGTCCACGAACGCCGGG 1236
                                                                                  

consensus_7524#0      TCCGTGCTTTTCTTGGCTTTGGGAAGAGACAACTAGAAGCGATTTGTTTAGTCGCCGGTA 1590
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      TTCTGGATCGCCGTCTTGTTGATGCACGCGCCGATGGGGAAGCTGTTCTCCACCTGCACC 1296
                                                                                  

consensus_7524#0      ACGCCAAACGTGGAATCATTAGGGCACAAACCAATCGGAGATTAGATTCGACATGGACTT 1650
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ACGCGGATCGCCGTGCCGCCCGTTCGCCGCCCCAGCTTGAGCACCACATCACGCTTGCGC 1356
                                                                                  

consensus_7524#0      TTTCTGTCCACGATAATCTCTCGTTTTTTTAGCACTGTTCGTTAGGAGGACTGAACTCGT 1710
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ACCTATGTAGTAGTTTTTGCAGAAATTTCGAGTGTTATGA-------------------- 1396
                                                                                  

consensus_7524#0      CATGTACTGCTAATCTCATCATGCTACTGTGTTTGCTAATTAATTTACCGGTAATTAAGC 1770
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      AGAGGGCGCCTAGAGCTAGCCGGAATTGAGAACTTGGGATAAGAGGAGAGGAGAGTGCGA 1830
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      CGGCGGCGTATCCAAGTTGCAGGCAGGCAGCCGCCCCACGACATGACTACGACGACGACG 1890
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      ACGACGATAATGGAGGATCAATTAGGCGTAGGGAGTGGAAGTACGAAGCTTCAAGACACA 1950
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      AACATCGGCTACTAAAACGTGAGGTTTGGTGACGGATCGTGTGGCTGTCAATCCAATGAA 2010
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      GGAACTTTGTACTTCATAGCCGCAGGTCCATATGAACATGGATCCTTCTCGAATCTTTGT 2070
consensus_7524#2      ------------------------------------------------------------
consensus_7524#1      ------------------------------------------------------------
                                                                                  

consensus_7524#0      TTGAATCGATCGCATGATACTCTCTTTGCTACGAAAATACGCAATGGAAATGTACA 2126
consensus_7524#2      --------------------------------------------------------
consensus_7524#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)