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Oryza sativa
cluster # 7566 cluster # 7566       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7566#0 length = 3344 sequences # 3  
 consensus_7566#1 length = 727 sequences # 1  
consensusID : consensus_7566#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3344
fasta sequence 
                              [CTCCAATCCACCAAACCCACCCCAAAACCCCTCCCAAACCCGCAAACTTCACCTCAAATTCCCCCCATTTTTGAACAAATTTCCTCATAATCCCGTCGAATTCGACCTCACCTCCCCATCCATGGAGCCGCAGCTCGCCGCACTCTGCAACCCCCGCCTCCTCCACTCCCCCCATGCCTTCCTCCCCAAGGCCACCTCCACCTCCACCTCCACCTCCTCGTCGTCGTCGTCGGCGGCGGCGGGGGGAGAAGCCCTCAAGCCTCGCCCGCGTCTCCCGCCACCGCAGCAGCAGCAGCCCGGCGTCTCCCACCACCACCACACGCGGCGGCGGAGGGAGCTGGGCGCCGCCGCGCTCGCCTCCCTCTGCGCGGGGATCGAGGCGCTGGCCGCCGAGGGGCGGCACGACGAGGCGCGCGACGCGTTCCGCGGGGCGCGCGCGGGCGCCCCGTTCACGCCGCTGCCGGCGTCCACGTACGACGCGCTGGTGGCCTCCGCCGCCGCGCTGCGGGAGCCCGGGTTCGCCGCGGCGGTGCTGTGGCACGTCGAGAGCTCCGGGTTCGAGCCCGGCCAGCGCGCGTGGAACCGCGTGCTCCGGATGCAGCTCGCGTGCGGGATGCTCGCCGAGGCGCGGCAGGTGTTCGACGGAATGCCCGCGAGGAGCGAGGCCACCTGGGGCACCATGATGGGCGGGCTGATCGACGCTGGGCGCCCGCGCGGCGCGCTCGCGCTGTTCCGGGAGCTGTGGGAGGAGGTGGGCGGGGATGCTGCGCCAAGGGTGGTGGTGGTGGCCGTCCGTGCCGTGACGGCATTGGGGTCGGCGCGTGCCGGGCAGCAGCTGCACTGTTGCGTTGCCAAGACAGGGATGTACGAGGACCAGTACCTGTCGTGTGCGCTCATCGACATGTATAACAAGTGCGGGAAGCTTGATGAGGCGAGGCGGGTGTTTGACGGGGTGCCTCAGAAGAGTGTCGTAGCGTGGAACTCCATGCTCGCGTCGTATTCGCTTCATGGATGCAGTGAGGAGGCATTGGATTTGTATCACAGCATGTGCGAGGGTGGTGTTGACATAGACCAGTTCACGTTCTCCACGATGCTCAGGGTTTTTTCTAGGCTGGGCTTGCTGGAGCATGCAAAGCAAGCTCATGCTGGCCTGATTCAGACAGGGTTACCTCTGGACATTGTCGGGAACACGGCACTGGTGGATCTATATTGCAAATGGGGTCTGATGGAAGATGCAAGGAATGTTTTTGAGAGGATGCCTATCAGGAATTTGATCTCTTGGAATGCTCTAATAGCAGGCTACGGCTATCATGGCATGGGGCAAAAGGCTATTGAGATGTTCGAGGAGCTAATAGCTGAGGGAATTGCTCCAAACCATGTTACATTTCTAGCTGTACTAAATGCATGCAGATTTTCTGGCTTTGTTGAGGAAGGGAAGAGAATTTTCCAGTTGATGACTCAAAATCAAAGAACAAAACCACGGGCGATGCATTATGCTTGTATTATCGAGCTTTTTGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAAAGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCACAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAAAATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGTCTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTGGATTACTGTTAGGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAGTTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGTTGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGTTTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTGTCTACTACCTTGAGGGTCACCCAGTGCCATCGGTTGTGCCATGACTGCCACAAGGTAATGAAGTTTGTAACACAAGTTACCAAGAGGGAAATTGTCATAAGGGATGGTAGTAGGTTTCACCACTTCAAACTCGGGACCTGTTCTTGCGGTGACTACTGGTAACTAGCTGCTCATTTGCAGAGGTTCTGAAACCAATTCTGGACTGGAAATAGCATGGTTTAATGAGGACAAAGCAGTCTGTTGATTTCTCAATTGTTTGTGCGGACTACTTGGTAATTGACCTTCTGTAAAAGCAGAATCTGCAAAAGTGGCCTGAATATGTGACAGATGGGCTTTCACACTGGAGATGCTAATCTTTACTTGTGTCCTTTAAGGAAGGAATAAAGCTCATATGTAACAAAGGATCAAAGGAAAGTATAATACTTTCAGCATCTATTGACAGCTAATTTCTACTCAGTTCATAACTACATCATAGTTGGAGAAAAATTCTCCTGTTCTACTTTTGCTCTCAGCTCTTTATTCACCGATTACCAATAAAAAGGGGTACACCTCCTTCGTTGTAAGCAGGCAAACAAGATTGTTCCTCCCATAACTGCTCTCAGCTTATCCTGCTTCCATAACTTCTCTCGGCTGATAGAAGATATACGTTTGAGAACACGCTGCGATGGCAAGAGCAACAATTGGGGCTGCTATTCTTGTCTGTGTGGTGATTTTAGCGCTGGATGTTACTGCTGACATACTAGGACTTCAGGCTCAGATTGCTCAAAACAAGGTTAAAACGGTGAGGATGTTGTTCATCGAATGTGAGCAATCATCCTCCAAAGTATACCAGTTGGGCCTCGCGGCTGCAGTGCTCCTTGTAGCTGCCCACGCAGTGGCTAACTTTCTCGGAGGCTGTGCCTGCATCTGCTCTCAGATGGAGTTCATCCGGGCTTCCATCAAGAGGAAGCTGGCAGCGACTCTGATAGTCCTCTCCTGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGCAACTCCAACCCCCGGAGAAATTGCAGCTTTGCGCAAGGCCATACCCTGGATCTCGGAGGGATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCAGCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTGATACTTTATCACACACGAGATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTAACCTGTTGTTTTTCCATTCAGTTTGTGATTCAGCTTTTGCAAATCATGGAAGCATCGAT]

[+] EMBL AK120206             [CTCCAATCCACCAAACCCACCCCAAAACCCCTCCCAAACCCGCAAACTTCACCTCAAATTCCCCCCATTTTTGAACAAATTTCCTCATAATCCCGTCGAATTCGACCTCACCTCCCCATCCATGGAGCCGCAGCTCGCCGCACTCTGCAACCCCCGCCTCCTCCACTCCCCCCATGCCTTCCTCCCCAAGGCCACCTCCACCTCCACCTCCACCTCCTCGTCGTCGTCGTCGGCGGCGGCGGGGGGAGAAGCCCTCAAGCCTCGCCCGCGTCTCCCGCCACCGCAGCAGCAGCAGCCCGGCGTCTCCCACCACCACCACACGCGGCGGCGGAGGGAGCTGGGCGCCGCCGCGCTCGCCTCCCTCTGCGCGGGGATCGAGGCGCTGGCCGCCGAGGGGCGGCACGACGAGGCGCGCGACGCGTTCCGCGGGGCGCGCGCGGGCGCCCCGTTCACGCCGCTGCCGGCGTCCACGTACGACGCGCTGGTGGCCTCCGCCGCCGCGCTGCGGGAGCCCGGGTTCGCCGCGGCGGTGCTGTGGCACGTCGAGAGCTCCGGGTTCGAGCCCGGCCAGCGCGCGTGGAACCGCGTGCTCCGGATGCAGCTCGCGTGCGGGATGCTCGCCGAGGCGCGGCAGGTGTTCGACGGAATGCCCGCGAGGAGCGAGGCCACCTGGGGCACCATGATGGGCGGGCTGATCGACGCTGGGCGCCCGCGCGGCGCGCTCGCGCTGTTCCGGGAGCTGTGGGAGGAGGTGGGCGGGGATGCTGCGCCAAGGGTGGTGGTGGTGGCCGTCCGTGCCGTGACGGCATTGGGGTCGGCGCGTGCCGGGCAGCAGCTGCACTGTTGCGTTGCCAAGACAGGGATGTACGAGGACCAGTACCTGTCGTGTGCGCTCATCGACATGTATAACAAGTGCGGGAAGCTTGATGAGGCGAGGCGGGTGTTTGACGGGGTGCCTCAGAAGAGTGTCGTAGCGTGGAACTCCATGCTCGCGTCGTATTCGCTTCATGGATGCAGTGAGGAGGCATTGGATTTGTATCACAGCATGTGCGAGGGTGGTGTTGACATAGACCAGTTCACGTTCTCCACGATGCTCAGGGTTTTTTCTAGGCTGGGCTTGCTGGAGCATGCAAAGCAAGCTCATGCTGGCCTGATTCAGACAGGGTTACCTCTGGACATTGTCGGGAACACGGCACTGGTGGATCTATATTGCAAATGGGGTCTGATGGAAGATGCAAGGAATGTTTTTGAGAGGATGCCTATCAGGAATTTGATCTCTTGGAATGCTCTAATAGCAGGCTACGGCTATCATGGCATGGGGCAAAAGGCTATTGAGATGTTCGAGGAGCTAATAGCTGAGGGAATTGCTCCAAACCATGTTACATTTCTAGCTGTACTAAATGCATGCAGATTTTCTGGCTTTGTTGAGGAAGGGAAGAGAATTTTCCAGTTGATGACTCAAAATCAAAGAACAAAACCACGGGCGATGCATTATGCTTGTATTATCGAGCTTTTTGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAAAGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCACAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAAAATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGTCTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTGGATTACTGTTAGGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAGTTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGTTGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGTTTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTGTCTACTACCTTGAGGGTCACCCAGTGCCATCGGTTGTGCCATGACTGCCACAAGGTAATGAAGTTTGTAACACAAGTTACCAAGAGGGAAATTGTCATAAGGGATGGTAGTAGGTTTCACCACTTCAAACTCGGGACCTGTTCTTGCGGTGACTACTGGTAACTAGCTGCTCATTTGCAGAGGTTCTGAAACCAATTCTGGACTGGAAATAGCATGGTTTAATGAGGACAAAGCAGTCTGTTGATTTCTCAATTGTTTGTGCGGACTACTTGGTAATTGACCTTCTGTAAAAGCAGAATCTGCAAAAGTGGCCTGAATATGTGACAGATGGGCTTTCACACTGGAGATGCTAATCTTTACTTGTGTCCTTTAAGGAAGGAATAAAGCTCATATGTAACAAAGGATCAAAGGAAAGTATAATACTTTCAGCATCTATTGACAGCTAATTTCTACTCAGTTCATAACTACATCATAGTTGGAGAAAAATTCTCCTGTTCTACTTTTGCTCTCAGCTCTTTATTCACCGATTACCAATAAAAAGGGGTACACCTCCTTCGTTGTAAGCAGGCAAACAAGATTGTTCCTCCCATAACTGCTCTCAGCTTATCCTGCTTCCATAACTTCTCTCGGCTGATAGAAGATATACGTTTGAGAACACGCTGCGATGGCAAGAGCAACAATTGGGGCTGCTATTCTTGTCTGTGTGGTGATTTTAGCGCTGGATGTTACTGCTGACATACTAGGACTTCAGGCTCAGATTGCTCAAAACAAGGTTAAAACGGTGAGGATGTTGTTCATCGAATGTGAGCAATCATCCTCCAAAGTATACCAGTTGGGCCTCGCGGCTGCAGTGCTCCTTGTAGCTGCCCACGCAGTGGCTAACTTTCTCGGAGGCTGTGCCTGCATCTGCTCTCAGATGGAGTTCATCCGGGCTTCCATCAAGAGGAAGCTGGCAGCGACTCTGATAGTCCTCTCCTGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGCAACTCCAACCCCCGGAGAAATTGCAGCTTTGCGCAAGGCCATACCCTGGATCTCGGAGGGATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCAGCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTGATACTTTATCACACACGAGATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTAACCTGTTGTTTTTCCATTCAGTTTGTGATTCAGCTTTTGCAAATCATGGAAGCATCGAT]
[+] EMBL CB637241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAAAGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCACAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAAAATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGTCTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTGGATTACTGTTAGGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAGTTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGTTGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGTTTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTGTCTACTACCTTGAGGGTCACCCAGTGCCATCGGTTGTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB640170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAAAGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCACAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAAAATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGTCTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTGGATTACTGTTAAGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAGTTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGTTGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGTTTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_7566#0
CTCCAATCCACCAAACCCACCCCAAAACCCCTCCCAAACCCGCAAACTTCACCTCAAATT
CCCCCCATTTTTGAACAAATTTCCTCATAATCCCGTCGAATTCGACCTCACCTCCCCATC
CATGGAGCCGCAGCTCGCCGCACTCTGCAACCCCCGCCTCCTCCACTCCCCCCATGCCTT
CCTCCCCAAGGCCACCTCCACCTCCACCTCCACCTCCTCGTCGTCGTCGTCGGCGGCGGC
GGGGGGAGAAGCCCTCAAGCCTCGCCCGCGTCTCCCGCCACCGCAGCAGCAGCAGCCCGG
CGTCTCCCACCACCACCACACGCGGCGGCGGAGGGAGCTGGGCGCCGCCGCGCTCGCCTC
CCTCTGCGCGGGGATCGAGGCGCTGGCCGCCGAGGGGCGGCACGACGAGGCGCGCGACGC
GTTCCGCGGGGCGCGCGCGGGCGCCCCGTTCACGCCGCTGCCGGCGTCCACGTACGACGC
GCTGGTGGCCTCCGCCGCCGCGCTGCGGGAGCCCGGGTTCGCCGCGGCGGTGCTGTGGCA
CGTCGAGAGCTCCGGGTTCGAGCCCGGCCAGCGCGCGTGGAACCGCGTGCTCCGGATGCA
GCTCGCGTGCGGGATGCTCGCCGAGGCGCGGCAGGTGTTCGACGGAATGCCCGCGAGGAG
CGAGGCCACCTGGGGCACCATGATGGGCGGGCTGATCGACGCTGGGCGCCCGCGCGGCGC
GCTCGCGCTGTTCCGGGAGCTGTGGGAGGAGGTGGGCGGGGATGCTGCGCCAAGGGTGGT
GGTGGTGGCCGTCCGTGCCGTGACGGCATTGGGGTCGGCGCGTGCCGGGCAGCAGCTGCA
CTGTTGCGTTGCCAAGACAGGGATGTACGAGGACCAGTACCTGTCGTGTGCGCTCATCGA
CATGTATAACAAGTGCGGGAAGCTTGATGAGGCGAGGCGGGTGTTTGACGGGGTGCCTCA
GAAGAGTGTCGTAGCGTGGAACTCCATGCTCGCGTCGTATTCGCTTCATGGATGCAGTGA
GGAGGCATTGGATTTGTATCACAGCATGTGCGAGGGTGGTGTTGACATAGACCAGTTCAC
GTTCTCCACGATGCTCAGGGTTTTTTCTAGGCTGGGCTTGCTGGAGCATGCAAAGCAAGC
TCATGCTGGCCTGATTCAGACAGGGTTACCTCTGGACATTGTCGGGAACACGGCACTGGT
GGATCTATATTGCAAATGGGGTCTGATGGAAGATGCAAGGAATGTTTTTGAGAGGATGCC
TATCAGGAATTTGATCTCTTGGAATGCTCTAATAGCAGGCTACGGCTATCATGGCATGGG
GCAAAAGGCTATTGAGATGTTCGAGGAGCTAATAGCTGAGGGAATTGCTCCAAACCATGT
TACATTTCTAGCTGTACTAAATGCATGCAGATTTTCTGGCTTTGTTGAGGAAGGGAAGAG
AATTTTCCAGTTGATGACTCAAAATCAAAGAACAAAACCACGGGCGATGCATTATGCTTG
TATTATCGAGCTTTTTGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAA
AGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCA
CAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAA
AATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGT
CTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTG
GATTACTGTTAGGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAG
TTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGT
TGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGT
TTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTGTCTACTAC
CTTGAGGGTCACCCAGTGCCATCGGTTGTGCCATGACTGCCACAAGGTAATGAAGTTTGT
AACACAAGTTACCAAGAGGGAAATTGTCATAAGGGATGGTAGTAGGTTTCACCACTTCAA
ACTCGGGACCTGTTCTTGCGGTGACTACTGGTAACTAGCTGCTCATTTGCAGAGGTTCTG
AAACCAATTCTGGACTGGAAATAGCATGGTTTAATGAGGACAAAGCAGTCTGTTGATTTC
TCAATTGTTTGTGCGGACTACTTGGTAATTGACCTTCTGTAAAAGCAGAATCTGCAAAAG
TGGCCTGAATATGTGACAGATGGGCTTTCACACTGGAGATGCTAATCTTTACTTGTGTCC
TTTAAGGAAGGAATAAAGCTCATATGTAACAAAGGATCAAAGGAAAGTATAATACTTTCA
GCATCTATTGACAGCTAATTTCTACTCAGTTCATAACTACATCATAGTTGGAGAAAAATT
CTCCTGTTCTACTTTTGCTCTCAGCTCTTTATTCACCGATTACCAATAAAAAGGGGTACA
CCTCCTTCGTTGTAAGCAGGCAAACAAGATTGTTCCTCCCATAACTGCTCTCAGCTTATC
CTGCTTCCATAACTTCTCTCGGCTGATAGAAGATATACGTTTGAGAACACGCTGCGATGG
CAAGAGCAACAATTGGGGCTGCTATTCTTGTCTGTGTGGTGATTTTAGCGCTGGATGTTA
CTGCTGACATACTAGGACTTCAGGCTCAGATTGCTCAAAACAAGGTTAAAACGGTGAGGA
TGTTGTTCATCGAATGTGAGCAATCATCCTCCAAAGTATACCAGTTGGGCCTCGCGGCTG
CAGTGCTCCTTGTAGCTGCCCACGCAGTGGCTAACTTTCTCGGAGGCTGTGCCTGCATCT
GCTCTCAGATGGAGTTCATCCGGGCTTCCATCAAGAGGAAGCTGGCAGCGACTCTGATAG
TCCTCTCCTGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGCA
ACTCCAACCCCCGGAGAAATTGCAGCTTTGCGCAAGGCCATACCCTGGATCTCGGAGGGA
TCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCAG
CATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTGATACTTTATCACACACGAGAT
CATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTAACCTGTTGTTTTTCC
ATTCAGTTTGTGATTCAGCTTTTGCAAATCATGGAAGCATCGAT

consensusID : consensus_7566#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 727
fasta sequence 
                              [GTAGCTGCCCACGCAGTGGTAACTTTTTTCGGAGGTTGTGCCTGCATCTGCTCTCAGATGGAGTTCATCCGGGCTTCCATTAACAGGAAGCTGGCAGCGACTCTGATAGTCCTCTCCTGGTAACCAACCCCTCTCTTTTATTGAAACCCTCCCTTTTGTAAGTCGTATAGCTCGGATGTTAAATTATCTCCTTTAACGTATACATCCTGACAAAAGAAACTTCCTTTTCAAAAAAGAAAAAGAAAGAAAGAAACATCGATTTGTTCTTCTTGTGTTGAACGTTTTTGTGCTTGCGACTGACATCACCATTGACTGTTCGATGTTGTAACAGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGCAACTCCAGCCCCCAGAGAAAGTGCAGCTTGGCGCAAGGCCAAACCCTGAGTCTCGGAGGGATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCAGCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTCATACTTTTATCACACACGAGATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTCTTAACCTGCTGTTTTTTTTTTTTCATTCAGTTTGTGATTCGGCTTTTGCAAATCATGGAAGCATCGATTGAGTTCTGTATTGTGTTGAAGTCAAAAGAAAAATTGATATACTTGTGCTTT]

[-] EMBL CB964457             [GTAGCTGCCCACGCAGTGGTAACTTTTTTCGGAGGTTGTGCCTGCATCTGCTCTCAGATGGAGTTCATCCGGGCTTCCATTAACAGGAAGCTGGCAGCGACTCTGATAGTCCTCTCCTGGTAACCAACCCCTCTCTTTTATTGAAACCCTCCCTTTTGTAAGTCGTATAGCTCGGATGTTAAATTATCTCCTTTAACGTATACATCCTGACAAAAGAAACTTCCTTTTCAAAAAAGAAAAAGAAAGAAAGAAACATCGATTTGTTCTTCTTGTGTTGAACGTTTTTGTGCTTGCGACTGACATCACCATTGACTGTTCGATGTTGTAACAGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGCAACTCCAGCCCCCAGAGAAAGTGCAGCTTGGCGCAAGGCCAAACCCTGAGTCTCGGAGGGATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCAGCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTCATACTTTTATCACACACGAGATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTCTTAACCTGCTGTTTTTTTTTTTTCATTCAGTTTGTGATTCGGCTTTTGCAAATCATGGAAGCATCGATTGAGTTCTGTATTGTGTTGAAGTCAAAAGAAAAATTGATATACTTGTGCTTT]




>consensus_7566#1
GTAGCTGCCCACGCAGTGGTAACTTTTTTCGGAGGTTGTGCCTGCATCTGCTCTCAGATG
GAGTTCATCCGGGCTTCCATTAACAGGAAGCTGGCAGCGACTCTGATAGTCCTCTCCTGG
TAACCAACCCCTCTCTTTTATTGAAACCCTCCCTTTTGTAAGTCGTATAGCTCGGATGTT
AAATTATCTCCTTTAACGTATACATCCTGACAAAAGAAACTTCCTTTTCAAAAAAGAAAA
AGAAAGAAAGAAACATCGATTTGTTCTTCTTGTGTTGAACGTTTTTGTGCTTGCGACTGA
CATCACCATTGACTGTTCGATGTTGTAACAGGCTTGCTCTTATTGCCGGATTCTCGCTGC
TGCTCGCCGGTGCCATGCGCAACTCCAGCCCCCAGAGAAAGTGCAGCTTGGCGCAAGGCC
AAACCCTGAGTCTCGGAGGGATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACT
ACGTCACCGCCAACGCTGCAGCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTC
ATACTTTTATCACACACGAGATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTT
TTTCTTCTTAACCTGCTGTTTTTTTTTTTTCATTCAGTTTGTGATTCGGCTTTTGCAAAT
CATGGAAGCATCGATTGAGTTCTGTATTGTGTTGAAGTCAAAAGAAAAATTGATATACTT
GTGCTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7566#0      CTCCAATCCACCAAACCCACCCCAAAACCCCTCCCAAACCCGCAAACTTCACCTCAAATT 60
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CCCCCCATTTTTGAACAAATTTCCTCATAATCCCGTCGAATTCGACCTCACCTCCCCATC 120
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CATGGAGCCGCAGCTCGCCGCACTCTGCAACCCCCGCCTCCTCCACTCCCCCCATGCCTT 180
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CCTCCCCAAGGCCACCTCCACCTCCACCTCCACCTCCTCGTCGTCGTCGTCGGCGGCGGC 240
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GGGGGGAGAAGCCCTCAAGCCTCGCCCGCGTCTCCCGCCACCGCAGCAGCAGCAGCCCGG 300
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CGTCTCCCACCACCACCACACGCGGCGGCGGAGGGAGCTGGGCGCCGCCGCGCTCGCCTC 360
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CCTCTGCGCGGGGATCGAGGCGCTGGCCGCCGAGGGGCGGCACGACGAGGCGCGCGACGC 420
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GTTCCGCGGGGCGCGCGCGGGCGCCCCGTTCACGCCGCTGCCGGCGTCCACGTACGACGC 480
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GCTGGTGGCCTCCGCCGCCGCGCTGCGGGAGCCCGGGTTCGCCGCGGCGGTGCTGTGGCA 540
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CGTCGAGAGCTCCGGGTTCGAGCCCGGCCAGCGCGCGTGGAACCGCGTGCTCCGGATGCA 600
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GCTCGCGTGCGGGATGCTCGCCGAGGCGCGGCAGGTGTTCGACGGAATGCCCGCGAGGAG 660
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CGAGGCCACCTGGGGCACCATGATGGGCGGGCTGATCGACGCTGGGCGCCCGCGCGGCGC 720
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GCTCGCGCTGTTCCGGGAGCTGTGGGAGGAGGTGGGCGGGGATGCTGCGCCAAGGGTGGT 780
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GGTGGTGGCCGTCCGTGCCGTGACGGCATTGGGGTCGGCGCGTGCCGGGCAGCAGCTGCA 840
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CTGTTGCGTTGCCAAGACAGGGATGTACGAGGACCAGTACCTGTCGTGTGCGCTCATCGA 900
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CATGTATAACAAGTGCGGGAAGCTTGATGAGGCGAGGCGGGTGTTTGACGGGGTGCCTCA 960
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GAAGAGTGTCGTAGCGTGGAACTCCATGCTCGCGTCGTATTCGCTTCATGGATGCAGTGA 1020
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GGAGGCATTGGATTTGTATCACAGCATGTGCGAGGGTGGTGTTGACATAGACCAGTTCAC 1080
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GTTCTCCACGATGCTCAGGGTTTTTTCTAGGCTGGGCTTGCTGGAGCATGCAAAGCAAGC 1140
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TCATGCTGGCCTGATTCAGACAGGGTTACCTCTGGACATTGTCGGGAACACGGCACTGGT 1200
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GGATCTATATTGCAAATGGGGTCTGATGGAAGATGCAAGGAATGTTTTTGAGAGGATGCC 1260
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TATCAGGAATTTGATCTCTTGGAATGCTCTAATAGCAGGCTACGGCTATCATGGCATGGG 1320
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GCAAAAGGCTATTGAGATGTTCGAGGAGCTAATAGCTGAGGGAATTGCTCCAAACCATGT 1380
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TACATTTCTAGCTGTACTAAATGCATGCAGATTTTCTGGCTTTGTTGAGGAAGGGAAGAG 1440
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      AATTTTCCAGTTGATGACTCAAAATCAAAGAACAAAACCACGGGCGATGCATTATGCTTG 1500
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TATTATCGAGCTTTTTGGTCAACAAGGGCGATTAGATGAAGCCTATTCAATGATAAGGAA 1560
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      AGCACCGTTCATCCCTACCGCGAACATGTGGGGTGCCTTGCTCACTGCTTCCAGGATCCA 1620
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CAGGAATTTGCAGCTTGCTAGATTATCTGCTGAGCAACTGTTGGCGATGGAACCTCAGAA 1680
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      AATAAATAATTATGTTGAGCTTCTTAACTTGTATATTAACTCTGGGAGACAGACTGAGGT 1740
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CTCAAAGGTTGTCAATACTTTGAAGAGGAGGGGTTTATGTATACATGCTGCTTGTAGCTG 1800
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GATTACTGTTAGGAAAAAAGATCACAGGTTTTTCTTTAAAGATAGTCTCCATCCACAAAG 1860
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TTCTGAAATCTATAGGAAGTTAGATTCATTATTGAAGGAGATAAAACAACTTGGTTATGT 1920
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TGCTGAGGAGAATGAATTGCTCCCTGATATTCTTCCTGATGAACAAAAGACATCGAAAGT 1980
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TTACCATAGCGAAAGACTTGCCGTTGCTTTTGGCCTTATCAGCACATCTTTGTCTACTAC 2040
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CTTGAGGGTCACCCAGTGCCATCGGTTGTGCCATGACTGCCACAAGGTAATGAAGTTTGT 2100
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      AACACAAGTTACCAAGAGGGAAATTGTCATAAGGGATGGTAGTAGGTTTCACCACTTCAA 2160
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      ACTCGGGACCTGTTCTTGCGGTGACTACTGGTAACTAGCTGCTCATTTGCAGAGGTTCTG 2220
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      AAACCAATTCTGGACTGGAAATAGCATGGTTTAATGAGGACAAAGCAGTCTGTTGATTTC 2280
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TCAATTGTTTGTGCGGACTACTTGGTAATTGACCTTCTGTAAAAGCAGAATCTGCAAAAG 2340
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TGGCCTGAATATGTGACAGATGGGCTTTCACACTGGAGATGCTAATCTTTACTTGTGTCC 2400
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      TTTAAGGAAGGAATAAAGCTCATATGTAACAAAGGATCAAAGGAAAGTATAATACTTTCA 2460
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      GCATCTATTGACAGCTAATTTCTACTCAGTTCATAACTACATCATAGTTGGAGAAAAATT 2520
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CTCCTGTTCTACTTTTGCTCTCAGCTCTTTATTCACCGATTACCAATAAAAAGGGGTACA 2580
consensus_7566#1      ------------------------------------------------------------
                                                                                  

consensus_7566#0      CCTCCTTCGTTGTAAGCAGGCAAACAAGATTGTTCCTCCCATAACTGCTCTCAGCTTATC 2640
consensus_7566#1      --------------------------------------------------GTAGCTGCCC 10
                                                                          ****   *

consensus_7566#0      CTGCTTCCATAACTTCTCTCGGCTGATAGAAGATATACGTTTGAGAACACGCTGCGATGG 2700
consensus_7566#1      ACGCAGTGGTAACTTTTTTCGG--------AGGT-TGTGCCTGCATCTGCTCTCAGATGG 61
                        **     ****** * ****        ** * *  *  **      * **  *****

consensus_7566#0      CAAGAGCAACAATTGGGGCTGCTATTCTTGTCTGTGTGGTGATTTTAGCGCTGGATGTTA 2760
consensus_7566#1      ----AGT--TCATCCGGGCTTCCATT---AACAGGAAGCTGGCAGCGACTCTGATAGTCC 112
                          **     **  ***** * ***     * *   * **       * ***   **  

consensus_7566#0      -CTGCTGACATACTAGGACTTCAGGCTCAGATTGCTCAAAACAAGGTTAAAACGGTGAGG 2819
consensus_7566#1      TCTCCTGGTA-ACCAACCCCTCTCTTTTA------TTGAAAC----CCTCCCTTTTGTAA 161
                       ** ***  * ** *   * **    * *      *  ****             **   

consensus_7566#0      ATGTTGTTCATCGAATGTGAGCAATCATCCTCCAAAGTATACCAGTTGGGCCTCGCGGCT 2879
consensus_7566#1      GTCGTATAGCTCGGATGTTAAATTATCTCCTTTAACGTATAC------ATCCTGACAAAA 215
                       *  * *   *** **** *       ****  ** ******        ***  *    

consensus_7566#0      GCAGTGCTCCTTGTAGCTGCCCACGCAGTGGCTAACTTTCTCGGAGGCTGTGCCTGCATC 2939
consensus_7566#1      GAAAC-TTCCTTTTCAAAAAAGAAAAAGAAAGAAA--------GAAACATCGATTTGTTC 266
                      * *    ***** *        *   **     **        **  *   *  *   **

consensus_7566#0      TGCTCTCAGATGGAGTTCATCCGGGCTTCCATCAAGAGGAAGCTGGCAGCGACTCTGATA 2999
consensus_7566#1      T--TCTTGTGTTGAACGTTTTTGTGCTTGCGACT----GACATCACCATTGACTGTTCGA 320
                      *  ***    * **     *  * **** *  *     **      **  **** *   *

consensus_7566#0      GTCCTCTCCTGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGC 3059
consensus_7566#1      TGTTGTAACAGGCTTGCTCTTATTGCCGGATTCTCGCTGCTGCTCGCCGGTGCCATGCGC 380
                              * **************************************************

consensus_7566#0      AACTCCAACCCCCGGAGAAATTGCAGCTTTGCGCAAGGCCATACCCTGGATCTCGGAGGG 3119
consensus_7566#1      AACTCCAGCCCCCAGAGAAAGTGCAGCTTGGCGCAAGGCCAAACCCTGAGTCTCGGAGGG 440
                      ******* ***** ****** ******** *********** ******  **********

consensus_7566#0      ATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCA 3179
consensus_7566#1      ATCCTGTGCTTCGTCCATGCCGGGGTCACCGTCGCCTACTACGTCACCGCCAACGCTGCA 500
                      ************************************************************

consensus_7566#0      GCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTGATACTTT-ATCACACACGAG 3238
consensus_7566#1      GCATACGAACTTCCTTAGAGATCATGCTACGAGCAAGCTCATACTTTTATCACACACGAG 560
                      *************************************** ******* ************

consensus_7566#0      ATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTT---AACCTGTTGTT 3295
consensus_7566#1      ATCATCACCTGATCACCAACCATTCTTTCCTTCTTTTTTTTTTCTTCTTAACCTGCTGTT 620
                      **********************************************   ****** ****

consensus_7566#0      TTTC------CATTCAGTTTGTGATTCAGCTTTTGCAAATCATGGAAGCATCGAT----- 3344
consensus_7566#1      TTTTTTTTTTCATTCAGTTTGTGATTCGGCTTTTGCAAATCATGGAAGCATCGATTGAGT 680
                      ***       ***************** ***************************     

consensus_7566#0      -----------------------------------------------
consensus_7566#1      TCTGTATTGTGTTGAAGTCAAAAGAAAAATTGATATACTTGTGCTTT 727


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)