cluster # 7568

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Oryza sativa
cluster # 7568 cluster # 7568 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7568#0 length = 1677 sequences # 4
consensusID : consensus_7568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1677
fasta sequence
                              [AAGAGTTTCCCCCTCCGCCTCCGAATCCCAACCCCACCGCCGCCGCCGCAAACCGTCTCGCCGTCGCCTCGCACCGGCGGCGAGAATGGCGAAGAAGAACAAGGAGCCCGCGTCCGACGACGCCGCGGCCATCCGCACCCTCTTCTCCGCAGACAACCCCTTCCGCCGCAAGCCCTCCGACGACCAGCCCGCTCCACCGGCGCCCACCGCCGCGGCGCCCCGAGGCAAGCACCCCGAACCCGAGGTCGCTGAGCCGTCCGCGAAGTCGCGCAGGGATGAGCCCCGGCGCAAGAGGAAGCGGGACGAGGTCGAGGCCGGCCACGAGCGGCGGAGGCTCGGCGGCGCACCCGCGCCTCCTCTTCCGGTCGTCGGGGAGAAGAGGAAGGTGCCCGAAGAGGTGGCTGCGGCGGCGGGGGCAGGGCAAGAGGAGGAGGAGGCGTTCGACGACGAGAGCAAGCTGCTGAGGACGGTCTTCGTGGGGAACCTGCCGCTCAAGACCAAGAGGAAGGCGCTCACCAAGGAGTTTGCGGCGTTCGGCGAGATCGAGTCCGTCAGGATACGCTCCGTGCCACTCACCGACACCAAGATTCCAAGGAAAGGAGCCGTCATAAAAGGAAAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGT-CGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACC-AAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA-GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA-CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA-TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG-CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTGCTCCNTGATTGAAATATTTGCATTTTAAAAAAAAAA]

[+] EMBL AK073369             [AAGAGTTTCCCCCTCCGCCTCCGAATCCCAACCCCACCGCCGCCGCCGCAAACCGTCTCGCCGTCGCCTCGCACCGGCGGCGAGAATGGCGAAGAAGAACAAGGAGCCCGCGTCCGACGACGCCGCGGCCATCCGCACCCTCTTCTCCGCAGACAACCCCTTCCGCCGCAAGCCCTCCGACGACCAGCCCGCTCCACCGGCGCCCACCGCCGCGGCGCCCCGAGGCAAGCACCCCGAACCCGAGGTCGCTGAGCCGTCCGCGAAGTCGCGCAGGGATGAGCCCCGGCGCAAGAGGAAGCGGGACGAGGTCGAGGCCGGCCACGAGCGGCGGAGGCTCGGCGGCGCACCCGCGCCTCCTCTTCCGGTCGTCGGGGAGAAGAGGAAGGTGCCCGAAGAGGTGGCTGCGGCGGCGGGGGCAGGGCAAGAGGAGGAGGAGGCGTTCGACGACGAGAGCAAGCTGCTGAGGACGGTCTTCGTGGGGAACCTGCCGCTCAAGACCAAGAGGAAGGCGCTCACCAAGGAGTTTGCGGCGTTCGGCGAGATCGAGTCCGTCAGGATACGCTCCGTGCCACTCACCGACACCAAGATTCCAAGGAAAGGAGCCGTCATAAAAGGAAAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGT CGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACC AAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTG                                    ]
[+] EMBL BE230478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGTCCGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACCAAAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK063818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTG                                    ]
[+] EMBL BQ906122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCGAAGGTGAGCCAGCGTCCAAGTTACCACGGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGATCATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACAGTTGTTAAACCCCATGCAAGAGTGATCTTGAAATGCCAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTGCTCCNTGATTGAAATATTTGCATTTTAAAAAAAAAA]




>consensus_7568#0
AAGAGTTTCCCCCTCCGCCTCCGAATCCCAACCCCACCGCCGCCGCCGCAAACCGTCTCG
CCGTCGCCTCGCACCGGCGGCGAGAATGGCGAAGAAGAACAAGGAGCCCGCGTCCGACGA
CGCCGCGGCCATCCGCACCCTCTTCTCCGCAGACAACCCCTTCCGCCGCAAGCCCTCCGA
CGACCAGCCCGCTCCACCGGCGCCCACCGCCGCGGCGCCCCGAGGCAAGCACCCCGAACC
CGAGGTCGCTGAGCCGTCCGCGAAGTCGCGCAGGGATGAGCCCCGGCGCAAGAGGAAGCG
GGACGAGGTCGAGGCCGGCCACGAGCGGCGGAGGCTCGGCGGCGCACCCGCGCCTCCTCT
TCCGGTCGTCGGGGAGAAGAGGAAGGTGCCCGAAGAGGTGGCTGCGGCGGCGGGGGCAGG
GCAAGAGGAGGAGGAGGCGTTCGACGACGAGAGCAAGCTGCTGAGGACGGTCTTCGTGGG
GAACCTGCCGCTCAAGACCAAGAGGAAGGCGCTCACCAAGGAGTTTGCGGCGTTCGGCGA
GATCGAGTCCGTCAGGATACGCTCCGTGCCACTCACCGACACCAAGATTCCAAGGAAAGG
AGCCGTCATAAAAGGAAAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTT
CAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAA
TCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCT
TTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGA
GGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGT
TGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAG
GGAGGCTGCAAACACTGTCGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAG
GCTTGCACATGCAAAATCAGCTGATGCAACACCAAAGAAGACGACGGATGCTGGCAAAAC
AAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAG
TGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATC
TGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCAGGGGAAGCAGCAAGG
CAGGACTAGTGAGACAGGACATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGC
AGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAA
TACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTG
TCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACATTGTTAAAC
CCCATGCAAGAGTGATCTTGAAATGCAAGGCTGATACAAATTCGTAGTACTGTATTACTT
AAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGT
GCACTGATATCATTCATTCTGCTCCNTGATTGAAATATTTGCATTTTAAAAAAAAAA
clustalw multiple alignements is not computed in this case