These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7568#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1677 fasta sequence [AAGAGTTTCCCCCTCCGCCTCCGAATCCCAACCCCACCGCCGCCGCCGCAAACCGTCTCGCCGTCGCCTCGCACCGGCGGCGAGAATGGCGAAGAAGAACAAGGAGCCCGCGTCCGACGACGCCGCGGCCATCCGCACCCTCTTCTCCGCAGACAACCCCTTCCGCCGCAAGCCCTCCGACGACCAGCCCGCTCCACCGGCGCCCACCGCCGCGGCGCCCCGAGGCAAGCACCCCGAACCCGAGGTCGCTGAGCCGTCCGCGAAGTCGCGCAGGGATGAGCCCCGGCGCAAGAGGAAGCGGGACGAGGTCGAGGCCGGCCACGAGCGGCGGAGGCTCGGCGGCGCACCCGCGCCTCCTCTTCCGGTCGTCGGGGAGAAGAGGAAGGTGCCCGAAGAGGTGGCTGCGGCGGCGGGGGCAGGGCAAGAGGAGGAGGAGGCGTTCGACGACGAGAGCAAGCTGCTGAGGACGGTCTTCGTGGGGAACCTGCCGCTCAAGACCAAGAGGAAGGCGCTCACCAAGGAGTTTGCGGCGTTCGGCGAGATCGAGTCCGTCAGGATACGCTCCGTGCCACTCACCGACACCAAGATTCCAAGGAAAGGAGCCGTCATAAAAGGAAAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGT-CGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACC-AAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA-GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA-CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA-TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG-CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTGCTCCNTGATTGAAATATTTGCATTTTAAAAAAAAAA] [+] EMBL AK073369 [AAGAGTTTCCCCCTCCGCCTCCGAATCCCAACCCCACCGCCGCCGCCGCAAACCGTCTCGCCGTCGCCTCGCACCGGCGGCGAGAATGGCGAAGAAGAACAAGGAGCCCGCGTCCGACGACGCCGCGGCCATCCGCACCCTCTTCTCCGCAGACAACCCCTTCCGCCGCAAGCCCTCCGACGACCAGCCCGCTCCACCGGCGCCCACCGCCGCGGCGCCCCGAGGCAAGCACCCCGAACCCGAGGTCGCTGAGCCGTCCGCGAAGTCGCGCAGGGATGAGCCCCGGCGCAAGAGGAAGCGGGACGAGGTCGAGGCCGGCCACGAGCGGCGGAGGCTCGGCGGCGCACCCGCGCCTCCTCTTCCGGTCGTCGGGGAGAAGAGGAAGGTGCCCGAAGAGGTGGCTGCGGCGGCGGGGGCAGGGCAAGAGGAGGAGGAGGCGTTCGACGACGAGAGCAAGCTGCTGAGGACGGTCTTCGTGGGGAACCTGCCGCTCAAGACCAAGAGGAAGGCGCTCACCAAGGAGTTTGCGGCGTTCGGCGAGATCGAGTCCGTCAGGATACGCTCCGTGCCACTCACCGACACCAAGATTCCAAGGAAAGGAGCCGTCATAAAAGGAAAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGT CGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACC AAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTG ] [+] EMBL BE230478 [ AAAATCAATGATTCTGTCGACAATGTACATGCCTATATTGTGTTCAAAGATGAGCAGGGTGCACGTGCTGCTTTATCTCATAATATGGCCCTGTTTGATGGCAATCATGTCCGTGTCGATATGGCATGTCCACCTCGTAAGAAACTTAAAGGCGAAGGACCTCTTTATGACAGAAAGCGGACAGTTTTTGTTGGTAATCTTCCGTTTGATATAAAGGATGAAGAGGTGTACCAAAAGTTCTGTGGTTCCAGTGGTTCAGAAGGTGATGTTGAAGCTATACGTGTTGTTCGAGATCCAGATACAAGTCTAGGAAAGGGTATCGCCTATGTTTTGTTCAAGACAAGGGAGGCTGCAAACACTGTCCGTAAGAAAACAGGATTTCAAGATTAGAGATCGCCTTCTGAGGCTTGCACATGCAAAATCAGCTGATGCAACACCAAAAGAAGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCA ] [+] EMBL AK063818 [ AGACGACGGATGCTGGCAAAACAAAGGGTGGATCGAAACACAAGACAGCTTTAACACCAAGCAGCAAATCCCATGAAGGCAGTGACAAGACCAAACGGAAGGCGTCAACTTTGTCATACCAAGGCCTTAGGGCAAGCAAATCTGGTGTGGTGAAGAAGGCGAAGGTGAGCCAGCGTCCAAGTTACCA GGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGA CATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACA TTGTTAAACCCCATGCAAGAGTGATCTTGAAATG CAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTG ] [+] EMBL BQ906122 [ GCGAAGGTGAGCCAGCGTCCAAGTTACCACGGGGAAGCAGCAAGGCAGGACTAGTGAGACAGGATCATGATGCTAGTTCTCAAAAAGCCAAGCGCCCTGCTGTTGCAGCAAGGAAGGCAAAGCAACTAGCCAAGAAACGCAAGTTGGATGCTCAAACTCCTGAAAATACACATCGGAGCAAAAAAGCAAAGAAGTAACCATCCTTAACTTGAAGATTGTCATCCTGTCTTTGTACAAGGGGGTTGAGTCAGATTTTGGACAAAATGAGCTCCTGACAGTTGTTAAACCCCATGCAAGAGTGATCTTGAAATGCCAAGGCTGATACAAATTCGTAGTACTGTATTACTTAAATTAAAGTTTGCGCTCATGTATACTGACATTAATGTTGTTTTTTCCCTGTAACATCGTGCACTGATATCATTCATTCTGCTCCNTGATTGAAATATTTGCATTTTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||