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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7580 cluster # 7580       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7580#0 length = 819 sequences # 4  

consensusID : consensus_7580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 819
fasta sequence
                              [TGGACTGAAGGAGTAGAAAATTACTGTGTGATCCTCTAGCTGTAGCTAACCCGCGCGCCGCTCCGAGAGATAAGATAAACCCGCGAGTAGTGAGAGTCGACGATAGATGGCGCCAACGCTGCCGTCGTGGTGGTTGCTCTTCCTCCTGCTCCTCGGAGTTGGCGCCACCGCGGCGGCCAGAGGCAGCAAGAAGCTGACTCCCCCGGTGTCGACGGCGTACGAGTGGCCGGAGCGGTTCCACGCGGTGGTGGTGTCGATCAACCTGACCAACCACGACCGCGGCGGCGGGCGGCTGCAGCTAATCGAGATCTACTACGACTGGCCGCATGGCCGCGACCTTAACATCGTCAGGGACCAGCTCTCCGGCGATCCACCGCTGTACAACGTGGAGTGGGTGAATGGCACCTCCTACCTCTTCGACACCGCCGCCTCCAGCTGCCGCACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGGCGTGACACCGTGGACGCCG-ACGTCG-CCACTGGCCGCCCCGTCCGCTGGATATTCAACGGCAATACGCGGCATGTGCTCGTGTTCGAAGCCGGTGTAATCCTCCAAGTGGCAGGCGCCGCCGTACTGCTTCCTCAACCTCAATAATCTCGTCGCTCGATCGATCTCGCTGCCTCATGATTATATTAACTGTGATCAGGTTCGCATGCATATATATTGGACCAGCTGATGATTATATCCACCCATCGATCAAGTCATTCCAAAGTCGATCAAAAAATCCTGTGCACGCGCGTACAACTTACTGAGTATATATGTTGTATATATAGTTTCCTCTCAAAAAAA]

[+] EMBL CF294865             [TGGACTGAAGGAGTAGAAAATTACTGTGTGATCCTCTAGCTGTAGCTAACCCGCGCGCCGCTCCGAGAGATAAGATAAACCCGCGAGTAGTGAGAGTCGACGATAGATGGCGCCAACGCTGCCGTCGTGGTGGTTGCTCTTCCTCCTGCTCCTCGGAGTTGGCGCCACCGCGGCGGCCAGAGGCAGCAAGAAGCTGACTCCCCCGGTGTCGACGGCGTACGAGTGGCCGGAGCGGTTCCACGCGGTGGTGGTGTCGATCAACCTGACCAACCACGACCGCGGCGGCGGGCGGCTGCAGCTAATCGAGATCTACTACGACTGGCCGCATGGCCGCGACCTTAACATCGTCAGGGACCAGCTCTCCGGCGATCCACCGCTGTACAACGTGGAGTGGGTGAATGGCACCTCCTACCTCTTCGACACCGCCGGCTCCAGCTGCCGCACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGGCGTGACACCGTGGACGCCG ACGTCG CCACTGGCCGCCCCGTCCGCTGGATATTCAACGGCAATACGCGGCATGTG                                                                                                                                                                                                                                                                        ]
[+] EMBL AK120363             [                                                                                                                CCAACGCTGCCGTCGTGGTGGTTGCTCTTCCTCCTGCTCCTCGGAGTTGGCGCCACCGCGGCGGCCAGAGGCAGCAAGAAGCTGACTCCCCCGGTGTCGACGGCGTACGAGTGGCCGGAGCGGTTCCACGCGGTGGTGGTGTCGATCAACCTGACCAACCACGACCGCGGCGGCGGGCGGCTGCAGCTAATCGAGATCTACTACGACTGGCCGCATGGCCGCGACCTTAACATCGTCAGGGACCAGCTCTCCGGCGATCCACCGCTGTACAACGTGGAGTGGGTGAATGGCACCTCCTACCTCTTCGACACCGCCGCCTCCAGCTGCCGCACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGGCGTGACACCGTGGACGCCG ACGTCG CCACTGGCCGCCCCGTCCGCTGGATATTCAACGGCAATACGCGGCATGTGCTCGTGTTCGAAGCCGGTGTAATCCTCCAAGTGGCAGGCGCCGCCGTACTGCTTCCTCAACCTCAATAATCTCGTCGCTCGATCGATCTCGCTGCCTCATGATTATATTAACTGTGATCAGGTTCGCATGCATATATATTGGACCAGCTGATGATTATATCCACCCATCGATC                                                                                           ]
[-] EMBL CF294866             [                                                                                                                                                                                                                           CGAGTGGCCGGAGCGGTTCCACGCGGTGGTGGTGTCGATCACCCTGACCAACCACGACCGCGGCGGCGGGCGGCTGCAGCTAATCGAGATCTACTACGACTGGCCGCATGGCCGCGACCTTAACATCGTCAGGGACCAGCTCTCCGGCGATCCACCGCTGTACAACGTGGAGTGGGTGAATGGCACCTCCTACCTCTTCGACACCGCCGCCTCCAGCTGCCGCACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGGCGTGACACCGTGGACGCCG ACGTCG CCACTGGCCGCCCCGTCCGCTGGATATTCAACGGCAATACGCGGCATGTGCTCGTAAACGAAGCCGGTGTAATCCTCCAAGTGGCAGGCGCCGCCGTAAAAATTCCTCAACCTCAATAATCTCGTCGCTCGATCGATCTCGCTGCCTCAAAATTATATTAACTGTGATCAGGTTCGCATGCATATATATTGGACCAGCTGATGATTATATCCACCCATCGATCAAGTCATTCCAAAGTCGATCAAAAA                                                                  ]
[-] EMBL CF296795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGGCGTGACACCGTGGACGCCGAACGTCGNCCA TGGCCGCCCCGTCCGCTGGATATTCAACGGCAATACGCGGCATGTGCTCGTGTTCGAAGCCGGTGTAATCCTCCAAGTGGCAGGCGCCGCCGTACTGCTTCCTCAACCTCAATAATCTCGTCGCTCGATCGATCTCGCTGCCTCATGATTATATTAACTGTGATCAGGTTCGCATGCATATATATTGGACCAGCTGATGATTATATCCACCCATCGATCAATTCATGCCAAAGTCGATCAATATATCCTGTGCACGCGCGTACAACTTACTGAGTATATATGTTGTATATATAGTTTCCTCTCAAAAAAA]


>consensus_7580#0 TGGACTGAAGGAGTAGAAAATTACTGTGTGATCCTCTAGCTGTAGCTAACCCGCGCGCCG CTCCGAGAGATAAGATAAACCCGCGAGTAGTGAGAGTCGACGATAGATGGCGCCAACGCT GCCGTCGTGGTGGTTGCTCTTCCTCCTGCTCCTCGGAGTTGGCGCCACCGCGGCGGCCAG AGGCAGCAAGAAGCTGACTCCCCCGGTGTCGACGGCGTACGAGTGGCCGGAGCGGTTCCA CGCGGTGGTGGTGTCGATCAACCTGACCAACCACGACCGCGGCGGCGGGCGGCTGCAGCT AATCGAGATCTACTACGACTGGCCGCATGGCCGCGACCTTAACATCGTCAGGGACCAGCT CTCCGGCGATCCACCGCTGTACAACGTGGAGTGGGTGAATGGCACCTCCTACCTCTTCGA CACCGCCGCCTCCAGCTGCCGCACCTTCCAGTTCCCCGTCGGCATCCTGCCTCGATCGGG CGTGACACCGTGGACGCCGACGTCGCCACTGGCCGCCCCGTCCGCTGGATATTCAACGGC AATACGCGGCATGTGCTCGTGTTCGAAGCCGGTGTAATCCTCCAAGTGGCAGGCGCCGCC GTACTGCTTCCTCAACCTCAATAATCTCGTCGCTCGATCGATCTCGCTGCCTCATGATTA TATTAACTGTGATCAGGTTCGCATGCATATATATTGGACCAGCTGATGATTATATCCACC CATCGATCAAGTCATTCCAAAGTCGATCAAAAAATCCTGTGCACGCGCGTACAACTTACT GAGTATATATGTTGTATATATAGTTTCCTCTCAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)