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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7606 cluster # 7606       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7606#0 length = 688 sequences # 5  

consensusID : consensus_7606#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 688
fasta sequence
                              [GGATTCGCGAGGCGGTATTATTCGTTGTAGAGTTGTACTGGCGGTTCGGTCAAACAGTCGTGGACCGTTAGATCCTGGACGGACGGTCAGGATCGGACGGCGCAGGGGGTCTCTTCCTTTTCTTCTTCTTTCTTCGGGAACCCTCTCGCGTGCGGCGGCGGCGGCGGTCTCGGCTCGGCCTCCTCTTCCGCACCCTCCTCCAGGAGCGCGAGATCCGAGATGGGGAACACTGCATCTGGGGCGACTGAAGCTTCAGATTCGACGGAAAAAACAGAACAAGCTCCTCCAGCTGACACAAAACCAAAAAAGAAGATCTGCTGTGCTTGCCCAGACACCAAGAAGTTGAGAGACGAATGCATCGTGCAGCATGGTGAGGACGCCTGCGGGAAGTGGATCGAAGCCCATCGGCAATGCCTGAGAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCCAATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGCAATTGCCTCAATTGATACTGTACGAAAGAAAGCATGCTTAA]

[+] EMBL AK111264             [GGATTCGCGAGGCGGTATTATTCGTTGTAGAGTTGTACTGGCGGTTCGGTCAAACAGTCGTGGACCGTTAGATCCTGGACGGACGGTCAGGATCGGACGGCGCAGGGGGTCTCTTCCTTTTCTTCTTCTTTCTTCGGGAACCCTCTCGCGTGCGGCGGCGGCGGCGGTCTCGGCTCGGCCTCCTCTTCCGCACCCTCCTCCAGGAGCGCGAGATCCGAGATGGGGAACACTGCATCTGGGGCGACTGAAGCTTCAGATTCGACGGAAAAAACAGAACAAGCTCCTCCAGCTGACACAAAACCAAAAAAGAAGATCTGCTGTGCTTGCCCAGACACCAAGAAGTTGAGAGACGAATGCATCGTGCAGCATGGTGAGGACGCCTGCGGGAAGTGGATCGAAGCCCATCGGCAATGCCTGAGAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCCAATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGCAATTGCCTCAATTGATACTGTACGAAAGAAAGCATGCTT  ]
[+] EMBL CF330889             [                                                                                                                                                               GGCGGCGGTCTCGGCTCGGCCTCCTCTTCCGCACCCTCCTCCAGGAGCGCGAGATCCGAGATGGGGAACACTGCATCTGGGGCGACTGAAGCTTCAGATTCGACGGAAAAAACAGAACAAGCTCCTCCAGCTGACACAAAACCAAAAAAGAAGATCTGCTGTGCTTGCCCAGACACCAAGAAGTTGAGAGACGAATGCATCGTGCAGCATGGTGAGGACGCCTGCGGGAAGTGGATCGAAGCCCATCGGCAATGCCTGAGAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCCAATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGCAATTGCCTCAATTG                           ]
[-] EMBL CB966932             [                                                                                                                                                                                 GCCTCCTCTTCCGCACCCTCCTCCAGGAGCGCGAGATCCGAGATGGGGAACACTGCATCTGGGGCGACTGAAGCTTCAGATTCGACGGTAAATACAGAACAAGCTCCTCCAGCTGACACAAAACCTAAAAAGAAGATCTGCTGTGCTTGCCCAGACACCAAGAAGTTGAGAGACGAATGCATCGTGCAGCATGGTGAGGACGCCTGCGGGAAGTGGATCGAAGCCCATCGGCAATGCCTGAGAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCNACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCCAATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGC ATTGCCTC ATTGATACTGTACGAAAGAAAGCATGCTT  ]
[+] EMBL CF338419             [                                                                                                                                                                                                                                                                                                                                                                                                         ATCGAAGCCCATCGGCTATGCCTGACAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATATGCATAGCATAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACA                                                                                            ]
[-] EMBL CF330888             [                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTTGCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAGATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCCAATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGCAATTGCCTCAATTGATACTGTACGAAAGAAgaaaaaaaaaa]


>consensus_7606#0 GGATTCGCGAGGCGGTATTATTCGTTGTAGAGTTGTACTGGCGGTTCGGTCAAACAGTCG TGGACCGTTAGATCCTGGACGGACGGTCAGGATCGGACGGCGCAGGGGGTCTCTTCCTTT TCTTCTTCTTTCTTCGGGAACCCTCTCGCGTGCGGCGGCGGCGGCGGTCTCGGCTCGGCC TCCTCTTCCGCACCCTCCTCCAGGAGCGCGAGATCCGAGATGGGGAACACTGCATCTGGG GCGACTGAAGCTTCAGATTCGACGGAAAAAACAGAACAAGCTCCTCCAGCTGACACAAAA CCAAAAAAGAAGATCTGCTGTGCTTGCCCAGACACCAAGAAGTTGAGAGACGAATGCATC GTGCAGCATGGTGAGGACGCCTGCGGGAAGTGGATCGAAGCCCATCGGCAATGCCTGAGA GCCGAAGGTTTCAACGTCTGATGCCATGCCCCCATCATAGGCATAGCAAAGTGATATTTT GCTCTTGTCATAATCCGCTTTCGATCCTGAACCAACATGATGAATAAAAGATTCTGTTAG ATCTCTAGGATGAACTCGCTGTTTCACTTTCGGAAAAGGGGACAAGTCACTGAACATGCC AATTTGCAAGAGGGCATATGTCTTTTTCCTAAGCACCATTGATGTGCAATTGCCTCAATT GATACTGTACGAAAGAAAGCATGCTTAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)