These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7616#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1187 fasta sequence [CAGCACGCGCGCGAATTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGCCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCGCGGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGCGGCGGCGGCGG-ACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCGAGACCGCCTTCCTCATCCGCGACCCCTCCTCCTCCGCCGCCGCCGCCGACGCCGCCCCGCGGTTCCGCCTCCGCTGGTTCACCCCCGTCGCCGAGGTGAATCTCTGCGGCCACGCGACGCTGGCATCCGCCCACTTCCTCTTCACCACCGTCCTCGCGAAGCAGCAGCACGCCGCCGCCGCCATGGTCGAGTTCGTGACGAGGTCCGGCATCCTGACCGCCAAGAAGGTTCCTGCTCCGCCGCCTCCGGCGAACGATGGCGGCGTCCCGGGTGAGGAGAAGTTGTTCATCGAGCTGGATTTCCCCATGATCGATCTCGTGGAGTACGATTCCGCGGAGACGCTGTCGATTCCGGAGACTCTGAATGGCGCCCGAGTCGTCAGTGTTTGGAAATCATCAACCGCCGGTGACCTCATCGTGGAACTTTCTTCCGGAAAAGAGGTTGCTGATATTATCCCTAACATTAATGAAATTAAAAAATGTGATGGTAGAGGAGTTATTGTTACGGGACCAGCACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG-CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA-AGGAGTGGAACATTGTACTTGGAGCTGGA-CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA-GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA-G-CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATGTTTAT-AAGCAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAA] [+] EMBL AK101084 [CAGCACGCGCGCGAATTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGCCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCGCGGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGCGGCGGCGGCGG ACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCGAGACCGCCTTCCTCATCCGCGACCCCTCCTCCTCCGCCGCCGCCGCCGACGCCGCCCCGCGGTTCCGCCTCCGCTGGTTCACCCCCGTCGCCGAGGTGAATCTCTGCGGCCACGCGACGCTGGCATCCGCCCACTTCCTCTTCACCACCGTCCTCGCGAAGCAGCAGCACGCCGCCGCCGCCATGGTCGAGTTCGTGACGAGGTCCGGCATCCTGACCGCCAAGAAGGTTCCTGCTCCGCCGCCTCCGGCGAACGATGGCGGCGTCCCGGGTGAGGAGAAGTTGTTCATCGAGCTGGATTTCCCCATGATCGATCTCGTGGAGTACGATTCCGCGGAGACGCTGTCGATTCCGGAGACTCTGAATGGCGCCCGAGTCGTCAGTGTTTGGAAATCATCAACCGCCGGTGACCTCATCGTGGAACTTTCTTCCGGAAAAGAGGTTGCTGATATTATCCCTAACATTAATGAAATTAAAAAATGTGATGGTAGAGGAGTTATTGTTACGGGACCAGCACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATG ] [+] EMBL C25991 [ TTCGGAGCAGCCGCCGCCGCCCGCCGCAGTCGTCGTCGTCGCCGCCGCCTCGNCGGAAATGGTCAAGAACGCCATCCAGTACGCCGTGGTGGACGCGTTCG GGCCGAGCCGTTCAAGGGCAACCCCGCCGCCGTATGCCTCCTGGAAGGGGAGGATGCCGNGGCGGC GCGGAACGAGCGGTGGATGCAGTCCGTCGCAGCCGAGTTCAACCTCTCCNAGACCGCCTTCCT ] [+] EMBL CF330171 [ CACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATG ] [-] EMBL CF330172 [ ACCTGCTGGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCAAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACATTGTGTTCTGG CACCTTACTGGGGTGGAAAGCTGGGGAAACAAAAACTTACGGCGTTTCAGGCTTCGCCA AGGAGTGGAACATTGTACTTGGAGCTGGA CGGCGAGAACAGGAGAGTCCGGATCCAGGGAGAAGCTGTCACTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCA GAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCA G CGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCAATGTTTAT AAGCAAAAAAAAA ] [+] EMBL BI805044 [ GGATCTGATTATGACTTCTTTTCACGATTCTTCTGCCCCAAATTTGGGATAGATGAGGATCCTGTGTGTGGAAGCGCACCTTGTGTTCTGGCCACCTTACTGGGGTGGAAAGCTGGGGAAACCAAAACTTACGGCGTTTCAGGCTTCGCCACAGGAGTGGAACCTTGTACTTGGAGCTGGACCGGCGAGACCCGGAGAGTCCGGATCCCGGGAGAAGCTGTCCCTGTGATGGCCGGGACTCTCTTGGCGTAGCATCTCTCTCTGTCACGAGTGTCTGGCGATCTGCTTGCTCTTGTATGCTTGAGAGTTCACGCCGGAGAAATTGTTGTTGTTCGACGCGTACCGCGAACGATTGTAATTGATGTTATATTTGGGAATAAAAGGATCTGCCATGTTTATGAAGCCAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||