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Oryza sativa
cluster # 7639 cluster # 7639       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7639#0 length = 1415 sequences # 5  

consensusID : consensus_7639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1415
fasta sequence
                              [CCTTCCCCTCCCCTCCTCCGTCAACAGCGGCGGCGGCCCCGGCGGTGGCGGCTGCTCCCCCTCCCCTCCTCCCCGTGAGGGAGTAGCGGCTCGGCGGGAGAAGGCTGCGGCGGCGGCTCCGTCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGCAGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTGCTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCAGCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTCCGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGCGGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTTTTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAATCGATTATCCAGTGCGGTCCACTTAATCCGACCGTATGGAAAAATGTTTATCCTGTACGGTTGGGCTGCCCGCATATAAAAATATTCATTTTCCAGACGCGTGGGTCCAGACGGTTGGGGAGCAGTGGCGAAGAGGAGGGACGCGGCGGGTTGTACATCGCAGCCACTAGCGGGAGGGAGGAGGAGTTTGGCGGCAGCATCGACATGGTTGCCTTGTTGCTAGGTTCGACACGTGACAAACGACTTGGATGACGACATGCGAGGTGCACTGTCGAAGGCCAGCTCACTCTAGACACCAATCTGGATGTCACAAATTCACAATGGAGCTAGTTGGCATCGAGGTCGATGCTATTGCATGGAGCTCACGCCGCCTTCGACTGCTCAGGGATGCTACCGGAGCATGCCACCGTCTTCGCCTTGATTCAGGGCTATCGTCGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACCTCCTCGCTTTGCCCATCCACGGATCCACCCACTGCTGTGCCGCCGCCCAACGGGCCTACTTGCCACCAGCGCCCTGGCCAAACCAGGGCGTTGCGGCGCTCGGCCACGCCAGCCCACGGCGACCCCTTTTTGTGCTGCCTCTCCTCTGTCGCTTCCCGCCACCGCGCCGGGGTTTGTCCTGGGCACGTGAGCGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATTGTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGACTTTTTATGATTGCAAGTGCCACATCAACAACATGAAAGAT]

[+] EMBL CB644601             [CCTTCCCCTCCCCTCCTCCGTCAACAGCGGCGGCGGCCCCGGCGGTGGCGGCTGCTCCCCCTCCCCTCCTCCCCGTGAGGGAGTAGCGGCTCGGCGGGAGAAGGCTGCGGCGGCGGCTCCGTCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGCAGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTGCTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCAGCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTCCGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGCGGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTTTTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAATCGATTATCCAGTGCGGTCCACTTAATCCGACCGTATGGAAAAATGTTTATCCTGTACGGTTGGGCTGCCCGCATATAAAAATATTCATTTTCCAGACGCGTGGGTCCAGACGGTTGGGGAGCAGTGGCGAAGAGGAGGGACGCGGCGGGTTGTACATCGCAGCCACTANCGGGAGGGAGGAGGAGTTTGGCGGCAGCATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB638668             [                                                                                                                         TCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGCAGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTGCTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCAGCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTCCGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGCGGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTTTTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAATCGATTATCCAGTGCGGTCCACTTAATCCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK111052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGTCCAGACGGTTGGGGAGCAGTGGCGAAGAGGAGGGACGCGGCGGGTTGTACATCGCAGCCACTAGCGGGAGGGAGGAGGAGTTTGGCGGCAGCATCGACATGGTTGCCTTGTTGCTAGGTTCGACACGTGACAAACGACTTGGATGACGACATGCGAGGTGCACTGTCGAAGGCCAGCTCACTCTAGACACCAATCTGGATGTCACAAATTCACAATGGAGCTAGTTGGCATCGAGGTCGATGCTATTGCATGGAGCTCACGCCGCCTTCGACTGCTCAGGGATGCTACCGGAGCATGCCACCGTCTTCGCCTTGATTCAGGGCTATCGTCGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACCTCCTCGCTCTGCCCATCCACGGATCCACCCACTGCTGTGCCGCCGCCCAACGGGCCTACTTGCCACCAGCGCCCTGGCCAAACCAGGGCGTTGCGGCGCTCGGCCACGCCAGCCCACGGCGACCCCTTTCTGTGCTGCCTCTCCTCTGTCGCTTCCCGCCACCGCGCCGGCGTCTGTCCTGGGCACGTGAGCGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAA                                                                                                                                        ]
[-] EMBL CB644602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTGTACATCGCAGCCACTAGCGGGAGGGAGGAGGAGTTTGGCGGCAGCATCGACATGGTTGCCTTGTTGCTAGGTTCGACACGTGACAAACGACTTGGATGACGACATGCGAGGTGCACTGTCGAAGGCCAGCTCACTTTAGACACCAATTTGGATGTCACAAATTCACAATGGAGCTAGTTGGCATCGAGGTCGATGCTATTGCATGGAGCTCACGCCGCCTTTGACTGCTCAGGGATGCTACCGGAGCATGCCACCGTTTTTGCCTTGATTCAGGGGTATCGTTGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACCTCCTCGCTTTGCCCATCCACGGATCCACCCACTGGTGTGCCGCCGCCCAACGGGCCTACTTGCCACCAGCGCCCTGGCCAAACCAGGGTGTTGTGGCGCTCGGCCACGCCAGCCCACGGGGACCCCTTTTTGTGCTGCCTTTCCTCTGTCGCTTTCCGCCACCGCGCCGGGGTTTGTTCTGGGCACGTGAGTGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATTGTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGA                                         ]
[-] EMBL CB638669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCGTCTTCGCCTTGATTCAGGGCTATCGTCGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAACTTCCTCGTTTTGCCCATCCACGGATCCACCCACTGTTGTGCCGCCGCCCAACGGGCTTATTTGCCACCAGCGCCTTGGCCAAACCAGGGCGTTGCGGCGTTGGGCCACGCCAGCCCACGGCGACCCCTTTTTGTGCTGCCTCTCCTCTGTGGTTTCCCGCCACCGCGCCGGGGTTTGTCTTGGGCACGTGAGCGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAACGAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATTGTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGACTTTTTATGATTGCAAGTGCCACATCAACAACATGAAAGAT]


>consensus_7639#0 CCTTCCCCTCCCCTCCTCCGTCAACAGCGGCGGCGGCCCCGGCGGTGGCGGCTGCTCCCC CTCCCCTCCTCCCCGTGAGGGAGTAGCGGCTCGGCGGGAGAAGGCTGCGGCGGCGGCTCC GTCGGCGAGGCGCGGCGGCTGCTGGCGAAGGGGTGTGGCGGCTGCTGGCGGAGGCGACGC AGTGGCTGCGGCGGGCGCGGGACGGGCGGCGGACAGCGCGGCGGCCGCGGCAGCGCGTTG CTCGGCGAAGGAGCGGCAAGCAGCGAGCGGCGCGCGAGGCGACGGCCAGGCGAGGCGGCA GCCTACGCAACTGGCGGCGGTGGGCGGGCTCGCGACGGCAACGGCGATAAGTTTCTCCTC CGCTCGTTGACGAGTTTCTGTAGTAGTTTCACGAGTTTCGCCGTAGAGCTCGGGGGAGGC GGGCAGGCTCAACGGCTCGCAGCGGCGGCCGGATGCGGGCAGTCGACGATGTTCGCGTTT TTTTTATTTTTGGGTTTTTTTTTTGCGTGCGGGAGATATAAATTGACCGTACGGGATAAT CGATTATCCAGTGCGGTCCACTTAATCCGACCGTATGGAAAAATGTTTATCCTGTACGGT TGGGCTGCCCGCATATAAAAATATTCATTTTCCAGACGCGTGGGTCCAGACGGTTGGGGA GCAGTGGCGAAGAGGAGGGACGCGGCGGGTTGTACATCGCAGCCACTAGCGGGAGGGAGG AGGAGTTTGGCGGCAGCATCGACATGGTTGCCTTGTTGCTAGGTTCGACACGTGACAAAC GACTTGGATGACGACATGCGAGGTGCACTGTCGAAGGCCAGCTCACTCTAGACACCAATC TGGATGTCACAAATTCACAATGGAGCTAGTTGGCATCGAGGTCGATGCTATTGCATGGAG CTCACGCCGCCTTCGACTGCTCAGGGATGCTACCGGAGCATGCCACCGTCTTCGCCTTGA TTCAGGGCTATCGTCGTGTGGCCGTTTATTCCTCCCGAGCTACCAATAAGGGCGAGCAAC CTCCTCGCTTTGCCCATCCACGGATCCACCCACTGCTGTGCCGCCGCCCAACGGGCCTAC TTGCCACCAGCGCCCTGGCCAAACCAGGGCGTTGCGGCGCTCGGCCACGCCAGCCCACGG CGACCCCTTTTTGTGCTGCCTCTCCTCTGTCGCTTCCCGCCACCGCGCCGGGGTTTGTCC TGGGCACGTGAGCGAGAAAAAGGTACACTAAAAAATAATCCAAGAAGAATAGAAGGGAAC GAGGAGAAGAAGCAAGAAAGAAAGAAGAGAAGAGAAAGGAAAAAAAAGGTGGGACCCATT GTATTTTTTTTTATTTTTTTAACCATATAATCACTGACATGTGGATCCTACCGACTTTTT ATGATTGCAAGTGCCACATCAACAACATGAAAGAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)