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Oryza sativa
cluster # 7716 cluster # 7716       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7716#0 length = 682 sequences # 5  

consensusID : consensus_7716#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 682
fasta sequence
                              [TCAATTTGCAAAGCATAAGTTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAACAAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTAAGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGGCAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCCGCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGGTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGTGTTTCTTGCCTCATCACTCTCGTGTTGTACCCCCGAGTAGTAGTGGTAGTATGCTCGTGGCTCCTATAAAGGAGTTTGTTTGGCTGGAGAAGCCAGCCATTGTTTCTGACAATGCTATGAGTGGTGTTCACCATGAGAACAATGGTCAAAGCTTTGGTGTGTGGCATGTGGATAGTTGCTATTCAGTTTTCCCTTTCNACTATCTCATGAAGAAGTTGAATTATTGCACAAGTTTTGAACTTATCAAATCAGGAAAAAAAAA]

[+] EMBL AU174389             [TCAATTTGCAAAGCATAAGTTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAACAAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTAAGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGGCAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCCGCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGGTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGNGTTTCTTGC                                                                                                                                                                                                                                                             ]
[+] EMBL AU161846             [TCAATTTGCAAAGCATAAGTTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAACAAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTAAGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGGCAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCCGCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGGTC                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU223380             [          AAGCATAAGTTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAACAAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTAAGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGGCAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCCGCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGGTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGTGTTTCTTGCCTCAaaaaa                                                                                                                                                                                                                                                    ]
[+] EMBL AU161847             [                                                               GAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAACAAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTAAGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGGCAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCCGCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGGTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGTGTTTCTTGCCTCATCTCTCTCGTGTTGTACCCCCGAGTAGTAGTGGTAGTATGCTCGTGGCTCCTATAAAGGAGTTTGTTTGGCTGGAGAAGCCAGCCATTGTTTCTGACAATGCTATGAGTGGTGTTCACCATGAGAACAATGGTCAAAGCTTTGGTGTGTGGCATGTGGATAGTTGCTATTCAGTTTTCCCTTTCNACTATCTCATGAAGAAGTTGAATTATTGCACAAGTTTTGAACTTATCAAATCAGGAAAAAAAAA]
[+] EMBL AU161868             [                                                                                                                                                                                                                                                                                                         GCCGCAATNTATGGTGCATGANGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCCATGGTTTGAGTTTTGAGNTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGTGTNTCTTGCCTCATCNCTCTCGTGTTGTACCCCCGAGTAGTAGTGGTAGTATGNTCGTGGCTCCTATAAAGGAGTTTGTTTGGCTGGAGAAGCCAGCCATTGTTTCTGACAATGCTATGAGTGGTGTTCACCATGAGAACAATGGTCAAAGCTTTGGTGTGTGGCATGTGGATAGTTGCTATTCAGTTTTCCCTTTCAACTATCTCATGAAGAAGTTGAATTATTGCACAAGTTTTGAACTTATCAAATCAGGAAAAAAAAA]


>consensus_7716#0 TCAATTTGCAAAGCATAAGTTTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGATGAAGAGGAGATCCATGTTCACAGTAGGGAAGAAC AAAGGAGTGGCCTTGTCGGTGCATAGGAAGCCCCTTCAGCACATGGTGCAGAGGAGGCTA AGGGAGCTGAAGAAGATAGTACCAGATGCCCATGAGGACAACGTCGATGTGCTGCTCCGG CAAACGGCTGAGTACATCTGCATCCTTGAGCTGAAGGTGGCCGTGTTGCGGAAGCTCGCC GCAATCTATGGTGCATGAAGGATGCCGCACCATCGGCCATCTCAGTTCATTGAAATGTCC ATGGTTTGAGTTTTGAGGTCAGAATTTGTTGCAGTTGTACATTTAATGGGAGAGGAGGGT GTTTCTTGCCTCATCACTCTCGTGTTGTACCCCCGAGTAGTAGTGGTAGTATGCTCGTGG CTCCTATAAAGGAGTTTGTTTGGCTGGAGAAGCCAGCCATTGTTTCTGACAATGCTATGA GTGGTGTTCACCATGAGAACAATGGTCAAAGCTTTGGTGTGTGGCATGTGGATAGTTGCT ATTCAGTTTTCCCTTTCNACTATCTCATGAAGAAGTTGAATTATTGCACAAGTTTTGAAC TTATCAAATCAGGAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)