These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7780#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1599 fasta sequence [TTAGAGCAGCTAAAGGCCATCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGTT] [+] EMBL AK100282 [TTAGAGCAGCTAAAGGCCATCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTAGCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGT ] [+] EMBL CB649467 [ AAGGCCCTCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTT CAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCA ] [+] EMBL CA998296 [ GCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACA ] [-] EMBL CB649468 [ ATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGTT] [+] EMBL AK063005 [ GGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||