cluster # 7780

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Oryza sativa
cluster # 7780 cluster # 7780 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7780#0 length = 1599 sequences # 5
consensusID : consensus_7780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1599
fasta sequence
                              [TTAGAGCAGCTAAAGGCCATCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGTT]

[+] EMBL AK100282             [TTAGAGCAGCTAAAGGCCATCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTAGCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGT ]
[+] EMBL CB649467             [            AAGGCCCTCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTACCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGGGTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTT        CAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA998296             [                                                                                                                                                                                                                  GCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB649468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGTT]
[+] EMBL AK063005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCTTTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATTGCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATAAAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCACACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTTGGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAATTTTGTTAAAAATTC                        ]




>consensus_7780#0
TTAGAGCAGCTAAAGGCCATCTGACTCCCAAAGAATAGAACTGCAACGTACCATGAACTA
CCCCTGATTACCAGAAACAGAGGGCTGATAAAACATCACCAGGCGGTTCCTCACAGGGGG
GTTGTGCAGTCTACAAGCAAATTGTACATAAGAGGAATTGAAAGAGATGTATCATCATCA
ACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACG
GCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGA
TGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAA
TCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCC
TGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCT
CCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTTTGCACCACAGCAACAGA
GAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTGGGAACCCAGACAAA
CAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGCTACA
TGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCT
ACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGG
TCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCT
CCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCAT
GCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGA
TCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTC
ATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAG
AAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCA
GACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAA
ATTTGATTTAAACGGGTTCAGCTGGGCCTAGGAAATGAGCACTAACAATTGCCATGTCCT
TTAGCACTATCAGTGAGAACAAGTGAAAACAGATTTTTTCTTCCGATGATCAATGGTATT
GCCATGCCTTCGATTGAAAGATCAACGCCACTTCACAATTTGACCATCTCTGCTGTTATA
AAATGGTAATTCACTGAAATAAGTGATGGAATTAGCGATAAGATGCTTCTTGTGCACCAC
ACAAGTTACCAATTTGGCCATGTAGATCCCATTCCCGGAGTCGGTAGCATTTGAGAACTT
GGCACTCTCCATTATTCTGCCTTACCGTGATTGTAGTTTGTACCATAGAAATATAACAAA
TTTTGTTAAAAATTCCATTTGAGCTAATGATTACTAGTT
clustalw multiple alignements is not computed in this case