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Oryza sativa
cluster # 7782 cluster # 7782       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7782#0 length = 1943 sequences # 3  
consensus_7782#1 length = 545 sequences # 2  

consensusID : consensus_7782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1943
fasta sequence
                              [TTCCTTGCAAACTTGACAGATCAAGTCCATCATATGACATATTGTTTATGCTAAAAGTTCTAGAGGGGTTGAACCGATACTCTTTTCACCTCGTCTCTGATGAGAGAAACCGTGCTTTTGTACATGGAAGCATAACTGACCTTGATGATCTGAAAGTTGATGTTTCTGTAGTTCCACAGCAGGAGTTTGTCAGTGCTAAATTGACAGATAAACTGGAGCAACAGATGCATGATCCCTTGGTTTTAAGGTCTCGTTGCCTGCCTTTATGGTGCACTGAACTGATGTCTGCATGTCCCTTCTTGTTTTCTTTTGAGGCAAGATGGAAGTATTTCCAGCTGACAGCATTTGGTTCTTTGATCCCACAACATGGGAATATGATGGATACAAGTGGCAGTGGTGTAATGACAGAAAGGGTGCCTTCCTTCTCACGGAAAAAGTTCAAAGTTGATCGCGACAATATACTTGTTTCTGCTGCTAAAGTGATGCAATCACATGCTCGGAGTAATGCAATGCTTGAAGTAGAATATGAAGAGGAAGTAGGCACAGGCTTGGGTCCTACGATGGAATTCTATACATTGATAAGTCATGAGTTTCAGAAGTCTGGTTTAGGCATGTGGAGAGGGGAGCTCTCCGGCGAAGCTGGCCTGGATAATGTTCATGGTGGTTCTGTATTTGTGGTTGCCCCTAATGGACTTTTTCCTAAACCATGGTCCACCCATGTGGATTGTTCTTCCTTCTCAGAAGTGAATAAACAGTTCCACCTCCTTGGTCAGGTCGTTGCAAAGGCAGTTAAAGACAACAGAATTCTCGACATTCCATTTTCTAAAGCATTTTACAGGCTTATACTAGGACAGGAACTTAATATATATGACATTCACTCATTTGATCCTGAACTAGCAATGACCCTTATGGAGTTTAAAGCACTTGCTGCTCGGAGAAAATATTTAGAATCAAGTTCAAGTGGGGACTGCAAGAGTACATCTGATTTGTCTTATCGAGGTTGCAGGATTGAGGATCTTGCTATTGAGTTCGCTCTTCCAGGATATCCAGAATATGTTCTTTCTTTAGAAAATAGCTTGGATAATGTAAGTGCTGACAATTTAGAACAGTATGTTTCTTTTGTTGTTGATGCAACAATTAGAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCATTAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAGATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGCTACACTTCCAGCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAGGCCATCAACGCAGAGCTTTCTTGCAATTTATAACAGGTTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGTGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGAGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAATGTGTGTTTTGTAAGTATCACGTAGGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCAAGACATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCATGCCCTTCCTTCTCTGTACATAGTGGTAGTTGCCTGTAGGTGTGCTCAAGTAGTCGCGAACATGGCGACTCTCAGCTTAGCTCGCTGCTGTTGATGCAAACCTTCTCTTTTGGTGTAAATATACGTGGCTGGTGAAAATCTTCAATACT]

[+] EMBL AK064382             [TTCCTTGCAAACTTGACAGATCAAGTCCATCATATGACATATTGTTTATGCTAAAAGTTCTAGAGGGGTTGAACCGATACTCTTTTCACCTCGTCTCTGATGAGAGAAACCGTGCTTTTGTACATGGAAGCATAACTGACCTTGATGATCTGAAAGTTGATGTTTCTGTAGTTCCACAGCAGGAGTTTGTCAGTGCTAAATTGACAGATAAACTGGAGCAACAGATGCATGATCCCTTGGTTTTAAGGTCTCGTTGCCTGCCTTTATGGTGCACTGAACTGATGTCTGCATGTCCCTTCTTGTTTTCTTTTGAGGCAAGATGGAAGTATTTCCAGCTGACAGCATTTGGTTCTTTGATCCCACAACATGGGAATATGATGGATACAAGTGGCAGTGGTGTAATGACAGAAAGGGTGCCTTCCTTCTCACGGAAAAAGTTCAAAGTTGATCGCGACAATATACTTGTTTCTGCTGCTAAAGTGATGCAATCACATGCTCGGAGTAATGCAATGCTTGAAGTAGAATATGAAGAGGAAGTAGGCACAGGCTTGGGTCCTACGATGGAATTCTATACATTGATAAGTCATGAGTTTCAGAAGTCTGGTTTAGGCATGTGGAGAGGGGAGCTCTCCGGCGAAGCTGGCCTGGATAATGTTCATGGTGGTTCTGTATTTGTGGTTGCCCCTAATGGACTTTTTCCTAAACCATGGTCCACCCATGTGGATTGTTCTTCCTTCTCAGAAGTGAATAAACAGTTCCACCTCCTTGGTCAGGTCGTTGCAAAGGCAGTTAAAGACAACAGAATTCTCGACATTCCATTTTCTAAAGCATTTTACAGGCTTATACTAGGACAGGAACTTAATATATATGACATTCACTCATTTGATCCTGAACTAGCAATGACCCTTATGGAGTTTAAAGCACTTGCTGCTCGGAGAAAATATTTAGAATCAAGTTCAAGTGGGGACTGCAAGAGTACATCTGATTTGTCTTATCGAGGTTGCAGGATTGAGGATCTTGCTATTGAGTTCGCTCTTCCAGGATATCCAGAATATGTTCTTTCTTTAGAAAATAGCTTGGATAATGTAAGTGCTGACAATTTAGAACAGTATGTTTCTTTTGTTGTTGATGCAACAATTAGAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCATTAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAGATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGCTACACTTCCAGCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAGGCCATCAACGCAGAGCTTTCTTGCAATTTATAACAGGTTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGTGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGAGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAATGTGTGTTTTGTAAGTATCACGTAGGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCAAGACATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCATGCCCTTCCTTCTCTGTACATAGTGGTAGTTGCCTGTAGGTGTGCTCAAGTAGTCGCGAACATGGCGACTCTCAGCTTAGCTCGCTGCTGTTGATGCAAACCTTCTCTTTTGGTGTAAATATACGTGGCTGGTGAAAATCTTCAATAC ]
[+] EMBL CB665977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGTTTACGCTTGTGGAGAGGGGAGCTCTCCGGCGAAGCTGGCCTGGATAATGTTCATGGTGGTTCTGTATTTGTGGTTGCCCCTAATGGACTTTTTCCTAAACCATGGTCCACCCATGTGGATTGTTCTTCCTTCTCAGAAGTGAATAAACAGTTCCACCTCCTTGGTCAGGTCGTTGCAAAGGCAGTTAAAGACAACAGAATTCTCGACATTCCATTTTCTAAAGCATTTTACAGGCTTATACTAGGACAGGAACTTAATATATATGACATTCACTCATTTGATCCTGAACTAGCAATGACCCTTATGGAGTTTAAAGCACTTGCTGCTCGGAGAAAATATTTAGAATCAAGTTCAAGTGGGGACTGCAAGAGTACATCTGATTTGTCTTATCGAGGTTGCAGGATTGAGGATCTTGCTATTGAGTTCGCTCTTCCAGGATATCCAGAATATGTTCTTTCTTTAGAAAATAGCTTGGATAATGTAAGTGCTGACAATTTAGAACAGTATGTTTCTTTTGTTGTTGATGCAACAATTAGAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCATTAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAGATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGCTACACTTCCAGCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAAGCCATCAACGCAGAGCTTTCTTGCAATTTATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB665978             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGCAACAATTAGAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCATTAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAGATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGNTACACTTCCAGCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAGGCCATCAACGCAGAGCTTTCTTGCAATTTATAACAGGTTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGTGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGAGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAATGTGTGTTTTGTAAGTATCACGTAGGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCAAGACATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCATGCCCTTCCTTCTCTGTACATAGTGGTAGTTGCCTGTAGGTGTGCTCAAGTAGTCGCGAACATGGCGACTCTCAGCTTAGCTCGCTGCTGTTGATGCAAACCTTCTCTTTTGGTGTAAATATACGTGGCTGGTGAAAATCTTCAATACT]


>consensus_7782#0 TTCCTTGCAAACTTGACAGATCAAGTCCATCATATGACATATTGTTTATGCTAAAAGTTC TAGAGGGGTTGAACCGATACTCTTTTCACCTCGTCTCTGATGAGAGAAACCGTGCTTTTG TACATGGAAGCATAACTGACCTTGATGATCTGAAAGTTGATGTTTCTGTAGTTCCACAGC AGGAGTTTGTCAGTGCTAAATTGACAGATAAACTGGAGCAACAGATGCATGATCCCTTGG TTTTAAGGTCTCGTTGCCTGCCTTTATGGTGCACTGAACTGATGTCTGCATGTCCCTTCT TGTTTTCTTTTGAGGCAAGATGGAAGTATTTCCAGCTGACAGCATTTGGTTCTTTGATCC CACAACATGGGAATATGATGGATACAAGTGGCAGTGGTGTAATGACAGAAAGGGTGCCTT CCTTCTCACGGAAAAAGTTCAAAGTTGATCGCGACAATATACTTGTTTCTGCTGCTAAAG TGATGCAATCACATGCTCGGAGTAATGCAATGCTTGAAGTAGAATATGAAGAGGAAGTAG GCACAGGCTTGGGTCCTACGATGGAATTCTATACATTGATAAGTCATGAGTTTCAGAAGT CTGGTTTAGGCATGTGGAGAGGGGAGCTCTCCGGCGAAGCTGGCCTGGATAATGTTCATG GTGGTTCTGTATTTGTGGTTGCCCCTAATGGACTTTTTCCTAAACCATGGTCCACCCATG TGGATTGTTCTTCCTTCTCAGAAGTGAATAAACAGTTCCACCTCCTTGGTCAGGTCGTTG CAAAGGCAGTTAAAGACAACAGAATTCTCGACATTCCATTTTCTAAAGCATTTTACAGGC TTATACTAGGACAGGAACTTAATATATATGACATTCACTCATTTGATCCTGAACTAGCAA TGACCCTTATGGAGTTTAAAGCACTTGCTGCTCGGAGAAAATATTTAGAATCAAGTTCAA GTGGGGACTGCAAGAGTACATCTGATTTGTCTTATCGAGGTTGCAGGATTGAGGATCTTG CTATTGAGTTCGCTCTTCCAGGATATCCAGAATATGTTCTTTCTTTAGAAAATAGCTTGG ATAATGTAAGTGCTGACAATTTAGAACAGTATGTTTCTTTTGTTGTTGATGCAACAATTA GAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCAT TAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAG ATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGCTACACTTCCA GCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAGGCCATCAACGCA GAGCTTTCTTGCAATTTATAACAGGTTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGC TAAATCCGAAGTTGACGGTTGTCCGAAAGCATAACAGCAACGAGGCTGATGATGACCTTC CGAGTGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGA TGAGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTTGAC TTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAATGTGTGTTTTGT AAGTATCACGTAGGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCAAGA CATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCATGCCCT TCCTTCTCTGTACATAGTGGTAGTTGCCTGTAGGTGTGCTCAAGTAGTCGCGAACATGGC GACTCTCAGCTTAGCTCGCTGCTGTTGATGCAAACCTTCTCTTTTGGTGTAAATATACGT GGCTGGTGAAAATCTTCAATACT



consensusID : consensus_7782#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 545
fasta sequence
                              [GCTTTCTTGCAATTTATAACAGGCTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGCGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGA-GGGAGAAACTACTCTACGCGATTACAGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAACATCTAACTGCGCATGCCATCACACGCAGTAAAAATTTGTGTGTCTTGTAAAGTATCACGTACGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCATGACATATGATTCAGGTGGAGCTGATGTTAAGAAAGGGAAAAAACTGAAGTGGCACATGCCCTTCCTTCTCTGTACCTCAGCCACAACCACACTAATCACTAATGAATTCACAGCCACCTGCAAGTCACCATATGGTAAAAACTCCCAACACATTGAATCCATAACTTGAATATCCTATAATAG]

[+] EMBL BI118805             [GCTTTCTTGCAATTTATAACAGGCTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGCGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGA GGGAGAAACTACTCTACGCGATTACAGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAACATCTAACTGCGCATGCCATCACACGCAGTAAAAATTTGTGTGTCTTGTAAAGTATCACGTACGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACCATGACATATGATTCAGGTGGAGCTGATGTTAAGAAAGGGAAAAAACTGAAGTGGCACATGCCCTTCCTTCTCTGTACCTCAGCCACAACCACACTAATCACTAATGAATTCACAGCCACCTGCAAGTCACCATATGGTAAAAACTCCCAACACATTGAATCCATAACTTGAATATCCTATAATAG]
[+] EMBL BI118798             [GCTTTCTTGCAATTTATAACAGGCTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTAAATCCGAAGTTGACGGTTGTCCGAAAGCAGCATAACAGCAACGAGGCTGATGATGACCTTCCGAGCGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAGATGAGGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTTGACTTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAATTTGTGTGTTTTGTAAAGTATCACGTAGGAAAACATGGTGTAAATGTGGGTGG TCACTGCTTAACTTACCATGACATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCATGCCCTTC                                                                                                                       ]


>consensus_7782#1 GCTTTCTTGCAATTTATAACAGGCTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGCTA AATCCGAAGTTGACGGTTGTCCGAAAGCAGCATAACAGCAACGAGGCTGATGATGACCTT CCGAGCGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACAAG ATGAGGGAGAAACTACTCTACGCGATTACAGAAGGTCAGGGGTCCTTCCACTTATCTTGA CTTGAAACTGATAACATCTAACTGCGCATGCCATCACACGCAGTAAAAATTTGTGTGTCT TGTAAAGTATCACGTACGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTACC ATGACATATGATTCAGGTGGAGCTGATGTTAAGAAAGGGAAAAAACTGAAGTGGCACATG CCCTTCCTTCTCTGTACCTCAGCCACAACCACACTAATCACTAATGAATTCACAGCCACC TGCAAGTCACCATATGGTAAAAACTCCCAACACATTGAATCCATAACTTGAATATCCTAT AATAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7782#0      TTCCTTGCAAACTTGACAGATCAAGTCCATCATATGACATATTGTTTATGCTAAAAGTTC 60
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TAGAGGGGTTGAACCGATACTCTTTTCACCTCGTCTCTGATGAGAGAAACCGTGCTTTTG 120
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TACATGGAAGCATAACTGACCTTGATGATCTGAAAGTTGATGTTTCTGTAGTTCCACAGC 180
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      AGGAGTTTGTCAGTGCTAAATTGACAGATAAACTGGAGCAACAGATGCATGATCCCTTGG 240
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TTTTAAGGTCTCGTTGCCTGCCTTTATGGTGCACTGAACTGATGTCTGCATGTCCCTTCT 300
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TGTTTTCTTTTGAGGCAAGATGGAAGTATTTCCAGCTGACAGCATTTGGTTCTTTGATCC 360
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      CACAACATGGGAATATGATGGATACAAGTGGCAGTGGTGTAATGACAGAAAGGGTGCCTT 420
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      CCTTCTCACGGAAAAAGTTCAAAGTTGATCGCGACAATATACTTGTTTCTGCTGCTAAAG 480
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TGATGCAATCACATGCTCGGAGTAATGCAATGCTTGAAGTAGAATATGAAGAGGAAGTAG 540
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GCACAGGCTTGGGTCCTACGATGGAATTCTATACATTGATAAGTCATGAGTTTCAGAAGT 600
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      CTGGTTTAGGCATGTGGAGAGGGGAGCTCTCCGGCGAAGCTGGCCTGGATAATGTTCATG 660
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GTGGTTCTGTATTTGTGGTTGCCCCTAATGGACTTTTTCCTAAACCATGGTCCACCCATG 720
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TGGATTGTTCTTCCTTCTCAGAAGTGAATAAACAGTTCCACCTCCTTGGTCAGGTCGTTG 780
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      CAAAGGCAGTTAAAGACAACAGAATTCTCGACATTCCATTTTCTAAAGCATTTTACAGGC 840
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TTATACTAGGACAGGAACTTAATATATATGACATTCACTCATTTGATCCTGAACTAGCAA 900
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TGACCCTTATGGAGTTTAAAGCACTTGCTGCTCGGAGAAAATATTTAGAATCAAGTTCAA 960
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GTGGGGACTGCAAGAGTACATCTGATTTGTCTTATCGAGGTTGCAGGATTGAGGATCTTG 1020
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      CTATTGAGTTCGCTCTTCCAGGATATCCAGAATATGTTCTTTCTTTAGAAAATAGCTTGG 1080
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      ATAATGTAAGTGCTGACAATTTAGAACAGTATGTTTCTTTTGTTGTTGATGCAACAATTA 1140
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GAAGTGGAATTGCAAGACAGCTGGAAGCTTTTAAGTCAGGATTCAATGAGGTATTTCCAT 1200
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      TAAGCATGCTCCAGGTCTTCTCAGAGGATGAGCTGGAGCGATTACTCTGCGGTGAACAAG 1260
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      ATACGTGGGATTTTGCGAAACTTGTGGATCATATAAAGTTTGATCATGGCTACACTTCCA 1320
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GCAGCCCTCCTGTCATTAATTTGTTGGAGGTTATACAGGAGTTTGAAGGCCATCAACGCA 1380
consensus_7782#1      ------------------------------------------------------------
                                                                                  

consensus_7782#0      GAGCTTTCTTGCAATTTATAACAGGTTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGC 1440
consensus_7782#1      --GCTTTCTTGCAATTTATAACAGGCTCACCTCGACTCCCACCGGGTGGGTTAGCTGCGC 58
                        *********************** **********************************

consensus_7782#0      TAAATCCGAAGTTGACGGTTGTCCGAAAGCA---TAACAGCAACGAGGCTGATGATGACC 1497
consensus_7782#1      TAAATCCGAAGTTGACGGTTGTCCGAAAGCAGCATAACAGCAACGAGGCTGATGATGACC 118
                      *******************************   **************************

consensus_7782#0      TTCCGAGTGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACA 1557
consensus_7782#1      TTCCGAGCGTGATGACTTGTGCTAATTATCTAAAGTTACCCCCCTATTCTTCCAAGGACA 178
                      ******* ****************************************************

consensus_7782#0      AGATGAGGGAGAAACTACTCTACGCGATTACGGAAGGTCAGGGGTCCTTCCACTTATCTT 1617
consensus_7782#1      AGATGAGGGAGAAACTACTCTACGCGATTACAGAAGGTCAGGGGTCCTTCCACTTATCTT 238
                      ******************************* ****************************

consensus_7782#0      GACTTGAAACTGATAGCATCTAGCTGCGCATGCCATCACACGCAGTAGAAAT--GTGTGT 1675
consensus_7782#1      GACTTGAAACTGATAACATCTAACTGCGCATGCCATCACACGCAGTAAAAATTTGTGTGT 298
                      *************** ****** ************************ ****  ******

consensus_7782#0      TTTGTAA-GTATCACGTAGGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTA 1734
consensus_7782#1      CTTGTAAAGTATCACGTACGAAAACATGGTGTAAATGTGGGTGGTTCACTGCTTAACTTA 358
                       ****** ********** *****************************************

consensus_7782#0      CCAAGACATATGATTCGGGTGGAGCTGATGTTAGGAAAGGGAAAAAACTGAGGTGGCGCA 1794
consensus_7782#1      CCATGACATATGATTCAGGTGGAGCTGATGTTAAGAAAGGGAAAAAACTGAAGTGGCACA 418
                      *** ************ **************** ***************** ***** **

consensus_7782#0      TGCCCTTCCTTCTCTGTACAT-AGTGGTAGTTGCCTGTAGGTGTGCTCAAGTAGTCGCGA 1853
consensus_7782#1      TGCCCTTCCTTCTCTGTACCTCAGCCACAACCACACTAAT---CACTAATGAATTCACAG 475
                      ******************* * **    *    *    *      ** * * * ** *  

consensus_7782#0      ACATG-GCGACTCTCAGCTTAGCTCGCTGCTGTTGATGCAAACCTTCTCTTTTGGTGTAA 1912
consensus_7782#1      CCACCTGCAAGTCACCATATGG-TAAAAACTCCCAACACA---TTGAATCCATAACTTGA 531
                       **   ** * ** *    * * *     **    *  **    *       *    * *

consensus_7782#0      ATATACGTGGCTGGTGAAAATCTTCAATACT 1943
consensus_7782#1      ATATCCTATAATAG----------------- 545
                      **** *     * *                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)