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Oryza sativa
cluster # 7783 cluster # 7783       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7783#0 length = 1464 sequences # 5  

consensusID : consensus_7783#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1464
fasta sequence
                              [TTTTGATGAATCATGAATTGCTCTTTTATATACCATGATTATTAGCTTTTTTCGCTTGGGGATGTGACCCCATTGTTTGTTTGTTACACAAGTTATCCTTTTGATGTGGTGTGGTATGTACCAGAAAAACAAAAGAAATATTCAGAATTGAAACTGATGTGCTCTTGGTGTGTCATCCAAGTCTTGAAACAATGCGACCTCTGATGAAAGGATCAATATCACCGTCCAGGACAGAGTTCAATTCTGACAGCTGGAGGCCTGTGTTGAGATCATGAACCAATTTCT-GAGGCCCAAATTTGTACCTTCTTGTCTCTCGGCTGTACAATTCCTCCACCGTCTGCCTCTTGATCGTCTTCAGGTTCGACGATCTTAACTCTCTGGATATAACAAGTAGCTTTGCTTTCAGCCTGCTTATAGCTTTCATCTTGTTTGCGAAGTAGCTTCGCTCACCTGAACTTTCAGCAGTAACTCCAGTTCGAATGTGTTGAACCCTAATGGCTGAATTTCTGTGATCCCGCCTCTTATGATCACTAGGGGAAGGAGAAATCTCCAGATCATTCTCGTCCAAGTGAAGATTAACTGGTCTGTCTAAGAAGAGAGGAATTATATCGACCCTAGCTGACGTTGC-------CTCATAAGTGCCAGCATTATCGACAGAAGGATAGATCATTCTGTGAGTTCCTTTTTCTCCAGTAAGGGTGCCAAACATGTACTCTGATTCAATTTCTATGGCTGCAGTCCATACACGACCACTTGTTGATGTGATCTTCTCAACCAGCCCATCCTTACAACCTTGTTTCCGTGCCCAACTTGAATACATGCAAAAGATCCTCTCTGCCCATAGCTCAGAAGCAGCACCATCTGATCCAGCAGTGACGATGATGCAAGCGCCTTCCTTGTCGTACGGACCCTTAAGAAGCTTGTACATCTGATAACGATCTAGAAACTCAGTAGCATCTACGGAGGTCTTGTATGCCTGCTTAAACAACTCAACATTGATGACATCCATCTCTGAGAGTTGACTAATCAGCTTAGCCTCTTCAGCCTTATAGCGAAGGTCTTTGAGATGGTCGACCACTCTGATGGCATCAGCCAGAGCAGAGAGTGTCTCGTGCGATTTAGCTGGATTGTCCCACAAGTTGCGCCCCCTCAACACCTCTTCCTGTCTGATTCTCCGCGCTTCCTCCATCTCCAGTGCACTGGATGCAGTCGTTTCGACCCGGACAACGGCATCTTCGATCCTCTTTTTCAAAGAGTACAAACCGAGCTCCTTGTAGGAGGCGGCGGTGGAGGCGCCGTCGCCGCGGCCGTCCGCCGGGAGGGCGGCGACTCGGCCGGCGCTGGACCAGGGGCGGGAGCGGGAGCAGCAGCGGGGCGACGCCGCGGCGCGCACGGACGCCGGAGAGGGCGCCGTGGGCGCCATGGATGGTGAGCGCGAGGGAAGGGGGAGGGGGGGTAAAGAGAGCG]

[+] EMBL CB619819             [TTTTGATGAATCATGAATTGCTCTTTTATATACCATGATTATTAGCTTTTTTCGCTTGGGGATGTGACCCCATTGTTTGTTTGTTACACAAGTTATCCTTTTGATGTGGTGTGGTATGTACCAGAAAAACAAAAGAAATATTCAGAATTGAAACTGATGTGCTCTTGGTGTGTCATCCAAGTCTTGAAACAATGCGACCTCTGATGAAAGGATCAATATCACCGTCCAGGACAGAGTTCAATTCTGACAGCTGGAGGCCTGTGTTGAGATCATGAACCAATTTCT GAGGCCCAAATTTGTACCTTCTTGTCTCTCGGCTGTACAATTCCTCCACCGTCTGCCTCTTGATCGTCTTCAGGTTCGACGATCTTAACTCTCTGGATATAACAAGTAGCTTTGCTTTCAGCCTGCTTATAGCTTTCATCTTGTTTGCGAAGTAGCTTCGCTCACCTGAACTTTCAGCAGTAACTCCAGTTCGAATGTGTTGAACCCTAATGGCTGAATTTCTGTGATCCCGCCTCTTATGATCACTAGGGGAAGGAGAAATCTCCAGATCATTCTCGTCCAAGTGAAGATTAACTGGTCTGTCTAAGAAGAGAGGAATTATATCGACCCTAGCTGACGTTGC       CTCATAAGTGCCAGCATTATCGACAGAAGGATAGATCATTCTGTGAGTTCCTTTTTCTCCAGTAAGGGTGCCAAACATGTACTCTGATTCAATTTCTATGGCTGCAGTCCATACACGACCACTTGTTGATGTGATCTTCTCAACCAGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL D43309               [                             ATACCAGGATTATTAGCTTTTTTCGCTTGGGGATGTGACCCCATTGTTTGTTTGTTACACAAGTTATCCTTTTGATGTGGTGTGGTATGTACCAGAAAAACAAAAGAAATATTCAGAATTGAAACTGATGTGCTCTTGGTGTGTCATCCAAGTCTTGAAACAATGCGACCTCTGATGAAAGGATCAATATCACCGTCCAGGACAGAGTTCAATTCTGACAGCTGGAGGCCTGTGTTGAGATCATG ACCAATTTCTNGAGGCCCAAATTnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF324439             [                                                                                                                                   AAAGAAATATTCAGAATTGAAACTGATGTGCTCTTGGTGTGTCATCCAAGTCTTGAAACAATGCGACCTCTGATGAAAGGATCAATATCACCGTCCAGGACAGAGTTCAATTCTGACAGCTGGAGGCCTGTGTTGAGATCATGAACCAATTTCT GAGGCCCAAATTTGTACCTTCTTGTCTCTCGGCTGTACAATTCCTCCACCGTCTGCCTCTTGATCGTCTTCAGGTTCGACGATCTTAACTCTCTGGATATAACAAGTAGCTTTGCTTTCAGCCTGCTTATAGCTTTCATCTTGTTTGCGAAGTAGCTTCGCTCACCTGAACTTTCAGCAGTAACTCCAGTTCGAATGTGTTGAACCCTAATGGCTGAATTTCTGTGATCCCGCCTCTTATGATCACTAGGGGAAGGAGAAATCTCCAGATCATTCTCGTCCAAGTGAAGATTAACTGGTCTGTCTAAGAAGAGAGGAATTATATCGACCCTAGCTGACGTTGCCTGCAAGCTCATAAGTGCCAGCATTATCGACAGAAGGATAGATCATTCTGTGAGTTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF324565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCATTATCGACAGAAGGATAGATCATTCTGTGAGTTCCTTTTTCTCCAGTAAGGGTGCCAAACATGTACTCTGATTCAATTTCTATGGCTGCAGTCCATACACGACCACTTGTTGATGTGATCTTCTCAACCAGCCCATCCTTACAACCTTGTTTCCGTGCCCAACTTGAATACATGCAAAAGATCCTCTCTGCCCATAGCTCAGAAGCAGCACCATCTGATCCAGCAGTGACGATGATGCAAGCGCCTTCCTTGTCGTACGGACCCTTAAGAAGCTTGTACATCTGATAACGATCTAGAAACTCAGTAGCATCTACGGAGGTCTTGTATGCCTGCTTAAACAACTCAACATTGATGACATCCATCTCTGAGAGTTGACTAATCAGCTTAGCCTCTTCAGCCTTATAGCGAAGGTCTTTGAGATGGTCGACCACTCTGATGGCATCAGCCAGAGCAGAGA                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB619818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAACATGTACTCTGATTCAATTTCTATGGCTGCAGTCCATACACGACCACTTGTTGATGTGATCTTCTCAACCAGCCCATCCTTACAACCTTGTTTCCGTGCCCAACTTGAATACATGCAAAAGATCCTCTCTGCCCATAGCTCAGAAGCAGCACCATCTGATCCAGCAGTGACGATGATGCAAGCGCCTTCCTTGTCGTACGGACCCTTAAGAAGCTTGTACATCTGATAACGATCTAGAAACTCAGTAGCATCTACGGAGGTCTTGTATGCCTGCTTAAACAACTCAACATTGATGACATCCATCTCTGAGAGTTGACTAATCAGCTTAGCCTCTTCAGCCTTATAGCGAAGGTCTTTGAGATGGTCGACCACTCTGATGGCATCAGCCAGAGCAGAGAGTGTCTCGTGCGATTTAGCTGGATTGTCCCACAAGTTGCGCCCCCTCAACACCTCTTCCTGTCTGATTCTCCGCGCTTCCTCCATCTCCAGTGCACTGGATGCAGTCGTTTCGACCCGGACAACGGCATCTTCGATCCTCTTTTTCAAAGAGTACAAACCGAGCTCCTTGTAGGAGGCGGCGGTGGAGGCGCCGTCGCCGCGGCCGTCCGCCGGGAGGGCGGCGACTCGGCCGGCGCTGGACCAGGGGCGGGAGCGGGAGCAGCAGCGGGGCGACGCCGCGGCGCGCACGGACGCCGGAGAGGGCGCCGTGGGCGCCATGGATGGTGAGCGCGAGGGAAGGGGGAGGGGGGGTAAAGAGAGCG]


>consensus_7783#0 TTTTGATGAATCATGAATTGCTCTTTTATATACCATGATTATTAGCTTTTTTCGCTTGGG GATGTGACCCCATTGTTTGTTTGTTACACAAGTTATCCTTTTGATGTGGTGTGGTATGTA CCAGAAAAACAAAAGAAATATTCAGAATTGAAACTGATGTGCTCTTGGTGTGTCATCCAA GTCTTGAAACAATGCGACCTCTGATGAAAGGATCAATATCACCGTCCAGGACAGAGTTCA ATTCTGACAGCTGGAGGCCTGTGTTGAGATCATGAACCAATTTCTGAGGCCCAAATTTGT ACCTTCTTGTCTCTCGGCTGTACAATTCCTCCACCGTCTGCCTCTTGATCGTCTTCAGGT TCGACGATCTTAACTCTCTGGATATAACAAGTAGCTTTGCTTTCAGCCTGCTTATAGCTT TCATCTTGTTTGCGAAGTAGCTTCGCTCACCTGAACTTTCAGCAGTAACTCCAGTTCGAA TGTGTTGAACCCTAATGGCTGAATTTCTGTGATCCCGCCTCTTATGATCACTAGGGGAAG GAGAAATCTCCAGATCATTCTCGTCCAAGTGAAGATTAACTGGTCTGTCTAAGAAGAGAG GAATTATATCGACCCTAGCTGACGTTGCCTCATAAGTGCCAGCATTATCGACAGAAGGAT AGATCATTCTGTGAGTTCCTTTTTCTCCAGTAAGGGTGCCAAACATGTACTCTGATTCAA TTTCTATGGCTGCAGTCCATACACGACCACTTGTTGATGTGATCTTCTCAACCAGCCCAT CCTTACAACCTTGTTTCCGTGCCCAACTTGAATACATGCAAAAGATCCTCTCTGCCCATA GCTCAGAAGCAGCACCATCTGATCCAGCAGTGACGATGATGCAAGCGCCTTCCTTGTCGT ACGGACCCTTAAGAAGCTTGTACATCTGATAACGATCTAGAAACTCAGTAGCATCTACGG AGGTCTTGTATGCCTGCTTAAACAACTCAACATTGATGACATCCATCTCTGAGAGTTGAC TAATCAGCTTAGCCTCTTCAGCCTTATAGCGAAGGTCTTTGAGATGGTCGACCACTCTGA TGGCATCAGCCAGAGCAGAGAGTGTCTCGTGCGATTTAGCTGGATTGTCCCACAAGTTGC GCCCCCTCAACACCTCTTCCTGTCTGATTCTCCGCGCTTCCTCCATCTCCAGTGCACTGG ATGCAGTCGTTTCGACCCGGACAACGGCATCTTCGATCCTCTTTTTCAAAGAGTACAAAC CGAGCTCCTTGTAGGAGGCGGCGGTGGAGGCGCCGTCGCCGCGGCCGTCCGCCGGGAGGG CGGCGACTCGGCCGGCGCTGGACCAGGGGCGGGAGCGGGAGCAGCAGCGGGGCGACGCCG CGGCGCGCACGGACGCCGGAGAGGGCGCCGTGGGCGCCATGGATGGTGAGCGCGAGGGAA GGGGGAGGGGGGGTAAAGAGAGCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)