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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3852 fasta sequence
[TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC----AG--------AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTTTCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGTTTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAAGGCTGGATTTTT]
[+] EMBL CB632171 [TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTTTTACCATTAAGTTCATTACAGTAATATCTGAGATTATTAATAGTGATGATATA ]
[+] EMBL AK100303 [ gctcgCGAGTAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC AG AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTTTCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGTTTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAAGGCTGGATTTTT]
[+] EMBL AK066498 [ AAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC AG AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTT ]
[+] EMBL CA998443 [ AGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCCATCTCTACAAC ]
consensusID : consensus_7790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 701 fasta sequence
[CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTACCCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCAGTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAGAAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGATATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB632172 [CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTACCCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCAGTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAGAAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGATATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7790#0 TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGC 60
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGT 120
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGC 180
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 ATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTG 240
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCC 300
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCC 360
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGG 420
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAG 480
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTT 540
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAAC 600
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTAC 660
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATC 720
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CTTTCTAATTAGATCTCTTACCAGAGTAATATCTGAGATTATTAATAGTAATGATATATT 780
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 AGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCAT 840
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAG 900
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATAT 960
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGC 1020
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAA 1080
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 AATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAAT 1140
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACT 1200
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGT 1260
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAA 1320
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGA 1380
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAG 1440
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGA 1500
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGG 1560
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTC 1620
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 AGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAG 1680
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 AGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTT 1740
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTT 1800
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCT 1860
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATAT 1920
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAA 1980
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCT 2040
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGG 2100
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 ATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATT 2160
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGT 2220
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGG 2280
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGA 2340
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 AGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGC 2400
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGT 2460
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTT 2520
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGC 2580
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAG 2640
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGG 2700
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 CCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCG 2760
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCA 2820
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTC 2880
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 ATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGA 2940
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGG 3000
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGA 3060
consensus_7790#1 -------------------CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGA 41
******************* *********************
consensus_7790#0 GTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAA 3120
consensus_7790#1 GTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTAC 101
*********************************** ******** **************
consensus_7790#0 CCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAAT 3180
consensus_7790#1 CCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAAT 161
************** *********************************************
consensus_7790#0 TAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACT 3240
consensus_7790#1 TAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACT 221
************************ ************************* *********
consensus_7790#0 TGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCA 3300
consensus_7790#1 TGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCA 281
**************************** ******** **********************
consensus_7790#0 GCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACA 3360
consensus_7790#1 GCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCA 341
********************************************************* **
consensus_7790#0 GTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCAT 3420
consensus_7790#1 GTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCAT 401
**************************** *******************************
consensus_7790#0 GAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAG 3480
consensus_7790#1 GAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAG 461
************** ****** **************** ********** **********
consensus_7790#0 AAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGT 3540
consensus_7790#1 AAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGT 521
***** ********* ****** *************************************
consensus_7790#0 TATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCG 3600
consensus_7790#1 TATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCG 581
************************************************************
consensus_7790#0 GTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGAT 3660
consensus_7790#1 GTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGAT 641
******************************* ************** *** *********
consensus_7790#0 ATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTT 3720
consensus_7790#1 ATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA 701
************************ * *************** **
consensus_7790#0 TCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGT 3780
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 TTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAA 3840
consensus_7790#1 ------------------------------------------------------------
consensus_7790#0 GGCTGGATTTTT 3852
consensus_7790#1 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||