cluster # 78

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 78 cluster # 78 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_78#0 length = 1160 sequences # 2

consensusID : consensus_78#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1160
fasta sequence

                              [TTTTTTGATAACCATCACTAAAAAGACTCTCATTTTATATTCAAACATCTACATACATAGTCCAATTATCACTGTTAGCTGGGAATCATAACTAAACTGTTAAACGATCATAGAGAATGGTAGAACAAATTCCTGCTTAGCTATCGGAGTTGGGAAAAGGATTACCTCTAAAATATATAATTAAGTTCTCATCCTTCGTTAACTCCTTGCAGTGTTCATAGCTTTCAGAAAACTTCCGAAATACCAATATTACTAAGCAGATTCAGTCACAAATATGTCCAGATCAGTTGCACCAGCACCTTATATATACCGTGATATAACTTCACCAGCTAAAGATCATAATTGAATACCAATTAAAAAAACTTCATCGGCTTAACATGCCCATACATTCTTAGATCTGATTGGGTGACAAATCAACCAATGGATGTATATGATATTGTTTTCCATACCCTTCAACCGCTTAAGAGACAAATCAAGAGTAAAAATCAACTAAGTCAGTAACCGTGGGCCTAAAACCTGNGAAACAAAAGAGGATGGGAAACTACAGCAACAAAAAAATGTGTTAGAGAGTCAAACTGGGTAAATAATGCTACTATATCCTAAATATGAACCATAGTACAAAATTGAATTAAATATTGATAGGAGAAATCGAAATGGTGTGCATGTATAAGTGAGGTTCTATTTTGATGAACAAAATCCGATCGAGCAAACAAAAGGAAAAGGGAAATTGGTGTGTGATCACCTGTGTTAGATCATTGGAGTGATTGGAGAGATAATAGTGTGAGATGCATATGAATCAAGCTAGTATAAATCCAGGAACAGGAGCAGACTGCCAGCTCCAGTTGCTTGGTAGATCGATGGATACGCAAGAGGGATAAATTTGATATAGTGACAGAAATAAAAGAGGGATAGGAGGAGAAGAAAAAGCAAGCCATTAATTGATGGATGTACTTGATGACAGTCGTCGGCAGTTTCAGTTCCTCGCGGCACCGCGATGCGAAGAGGCGAGCAGGCACGGGAGAAGAAGCGACGCGGGAGCGGGGCGCGCGATGCAACCAGGGGACAGGGGGGCATCGCGCCCCGGGCACTGCAAGCGGGATCGCCCGGCGCGGGAGGCCATGGGGTGCAGGCGTGAGCACGCTAGCTGGGATGCGATGCGA]

[+] EMBL CF308929             [TTTTTTGATAACCATCACTAAAAAGACTCTCATTTTATATTCAAACATCTACATACATAGTCCAATTATCACTGTTAGCTGGGAATCATAACTAAACTGTTAAACGATCATAGAGAATGGTAGAACAAATTCCTGCTTAGCTATCGGAGTTGGGAAAAGGATTACCTCTAAAATATATAATTAAGTTCTCATCCTTCGTTAACTCCTTGCAGTGTTCATAGCTTTCAGAAAACTTCCGAAATACCAATATTACTAAGCAGATTCAGTCACAAATATGTCCAGATCAGTTGCACCAGCACCTTATATATACCGTGATATAACTTCACCAGCTAAAGATCATAATTGAATACCAATTAAAAAAACTTCATCGGCTTAACATGCCCATACATTCTTAGATCTGATTGGGTGACAAATCAACCAATGGATGTATATGATATTGTTTTCCATACCCTTCAACCGCTTAAGAGACAAATCAAGAGTAAAAATCAACTAAGTCAGTAACCGTGGGCCTAAAACCTGNGAAACAAAAGAGGATGGGAAACTACAGCAACAAAAAAATGTGTTAGAGAGTCAAACTGGGTAAATAATGCTACTATATCCTAAATATGAACCATAGTACAAAATTGAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF308928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGTCAAACTGGGTAAATAATGCTACTATATCCTAAATATGAACCATAGTACAAAATTGAATTAAATATTGATAGGAGAAATCGAAATGGTGTGCATGTATAAGTGAGGTTCTATTTTGATGAACAAAATCCGATCGAGCAAACAAAAGGAAAAGGGAAATTGGTGTGTGATCACCTGTGTTAGATCATTGGAGTGATTGGAGAGATAATAGTGTGAGATGCATATGAATCAAGCTAGTATAAATCCAGGAACAGGAGCAGACTGCCAGCTCCAGTTGCTTGGTAGATCGATGGATACGCAAGAGGGATAAATTTGATATAGTGACAGAAATAAAAGAGGGATAGGAGGAGAAGAAAAAGCAAGCCATTAATTGATGGATGTACTTGATGACAGTCGTCGGCAGTTTCAGTTCCTCGCGGCACCGCGATGCGAAGAGGCGAGCAGGCACGGGAGAAGAAGCGACGCGGGAGCGGGGCGCGCGATGCAACCAGGGGACAGGGGGGCATCGCGCCCCGGGCACTGCAAGCGGGATCGCCCGGCGCGGGAGGCCATGGGGTGCAGGCGTGAGCACGCTAGCTGGGATGCGATGCGA]




>consensus_78#0
TTTTTTGATAACCATCACTAAAAAGACTCTCATTTTATATTCAAACATCTACATACATAG
TCCAATTATCACTGTTAGCTGGGAATCATAACTAAACTGTTAAACGATCATAGAGAATGG
TAGAACAAATTCCTGCTTAGCTATCGGAGTTGGGAAAAGGATTACCTCTAAAATATATAA
TTAAGTTCTCATCCTTCGTTAACTCCTTGCAGTGTTCATAGCTTTCAGAAAACTTCCGAA
ATACCAATATTACTAAGCAGATTCAGTCACAAATATGTCCAGATCAGTTGCACCAGCACC
TTATATATACCGTGATATAACTTCACCAGCTAAAGATCATAATTGAATACCAATTAAAAA
AACTTCATCGGCTTAACATGCCCATACATTCTTAGATCTGATTGGGTGACAAATCAACCA
ATGGATGTATATGATATTGTTTTCCATACCCTTCAACCGCTTAAGAGACAAATCAAGAGT
AAAAATCAACTAAGTCAGTAACCGTGGGCCTAAAACCTGNGAAACAAAAGAGGATGGGAA
ACTACAGCAACAAAAAAATGTGTTAGAGAGTCAAACTGGGTAAATAATGCTACTATATCC
TAAATATGAACCATAGTACAAAATTGAATTAAATATTGATAGGAGAAATCGAAATGGTGT
GCATGTATAAGTGAGGTTCTATTTTGATGAACAAAATCCGATCGAGCAAACAAAAGGAAA
AGGGAAATTGGTGTGTGATCACCTGTGTTAGATCATTGGAGTGATTGGAGAGATAATAGT
GTGAGATGCATATGAATCAAGCTAGTATAAATCCAGGAACAGGAGCAGACTGCCAGCTCC
AGTTGCTTGGTAGATCGATGGATACGCAAGAGGGATAAATTTGATATAGTGACAGAAATA
AAAGAGGGATAGGAGGAGAAGAAAAAGCAAGCCATTAATTGATGGATGTACTTGATGACA
GTCGTCGGCAGTTTCAGTTCCTCGCGGCACCGCGATGCGAAGAGGCGAGCAGGCACGGGA
GAAGAAGCGACGCGGGAGCGGGGCGCGCGATGCAACCAGGGGACAGGGGGGCATCGCGCC
CCGGGCACTGCAAGCGGGATCGCCCGGCGCGGGAGGCCATGGGGTGCAGGCGTGAGCACG
CTAGCTGGGATGCGATGCGA

clustalw multiple alignements is not computed in this case