|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2481 fasta sequence
[CGCGTTAGATTCTGGCGTGATCTGAGCCATGAGTCCATCCATGGCCCCAACCTAGCTAGTGCGTGTTGTGTTCTTTAGTTGGTCGCCACACGGGCAATGCCAAAGTAAAGCCAGGCATGATGCCGGAGGAGGAGGAGGAGAATATGAGATGAGATGAACACTTAAAAGGAGAAAGAAAGAAGGAGGAGAATATACAAAGGGAAGTTGTTCCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAGAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGTCCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAGGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT-ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG-CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA-AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT-TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC-AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA-CAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACAAAAAAAAAAA]
[+] EMBL AK073651 [CGCGTTAGATTCTGGCGTGATCTGAGCCATGAGTCCATCCATGGCCCCAACCTAGCTAGTGCGTGTTGTGTTCTTTAGTTGGTCGCCACACGGGCAATGCCAAAGTAAAGCCAGGCATGATGCCGGAGGAGGAGGAGGAGAATATGAGATGAGATGAACACTTAAAAGGAGAAAGAAAGAAGGAGGAGAATATACAAAGGGAAGTTGTTCCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAGAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGTCCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAGGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA CAGTGTATGGGCAGCTACTGT ]
[+] EMBL AK073520 [ CCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAAAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGGTCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAAGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTTAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA CAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACA ]
[+] EMBL CF323723 [ GAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAA ]
[+] EMBL BQ908701 [ GATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCTGACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACC AAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTATGTGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTCNNAAACATGTCATAGTTGTTTCTTTTTTACNGC AAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACN CAGTGTATGGCCAGCTACTGTTGTC ]
[+] EMBL BM420891 [ AGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTGCCAGGTCAGTTACCAAGTCTACATACC AAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCANAGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACACCAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACCAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||