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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7816#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1114 fasta sequence
[TCCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACAAAAAAAGGA]
[+] EMBL AK102161 [TCCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACA ]
[+] EMBL AK061166 [ CCATTCGCGTCGTGTTGCTCCGTCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCAC ]
[+] EMBL AK104514 [ TCGGTCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTC ]
[+] EMBL CA753830 [ TCGTGTGTCCCCCAAAGGCTCCAAGCTCCGTCGTTCCTCTCCTCCTCCGCCGCCGCCGCCGCCGAAGCCGACGAGCAGTAGCCGGTAGGCATGACGAGGCTCGCGGCAGCCGCGCTCCGGAGGGCCACCGCCGCATCTGGGATCCCCTCGTCCTCCTCGCGCTCGTCCGTGCTTGCTCCGTTCGCGCCTCGCCTCTTCTCCACCGAGGCGTCCGGAGAAACCCCCGCGGCGGGCGCCGCCGCCCAGGGGTCGCAGGACGAGCCTTTCTTCAAGCCTTCTGACGAAGGTGTGGCATATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGANAAGCTATACTATTGGCAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTG ]
[-] EMBL CB679091 [ ATGGAAGGTTCTACAGTGTTATTCCTGGAGGCAGCCGTCTCCCTAAGAGCATGCTCAAAACTGATATTATCCACCACCTTGATAAATCTGAACTGTCACTGGACGATGTGAAGATTGATTATAACAGGGGATATTATCCAGTGGGCGCGTTGTTGAGGTTTTCTTCAGTGCCATTATTTAACACAGCAGTCAGGCAAACACGAGAAGGTCGTCAGTACAGGCTTGAGATGATCAGTCGTGAGGAGTTTGATCTGAAGCAGTCTTATGATGGAAAAGCTATACTATTGCAAGGAGTCCCTCGAAATGCTGTACCAGAGGACATAGAACGATTCCTGTGTGGCACCAATGTTGAACCTCCGCCATTTGAAAGCTTTCTCAGACCTGGTGTCCCAGATCCTATCAGAGTGGTGCTGGTTAAATTCCGCTCAAGGACTGATGCCGCCAATGCTTTCATTACTAAGAACCGGGGTTTCTGCCTGAACAACCCTGTGAGCATGCGTGTTCTTCAATAGCCCGTCCATTTTTATCGTGCTTATGGCAATCAGCTCCAAAATGAACCCTCTCAGCCTTTGGATCTGAACTCCTATCTGCAAATGTGGTAGAAAGTTTGACTTTGTACGTTTGCACTCTACTGTCAGTCGCTTTTATGTTATTTTGTTTGTGCTTTTAGTTGTGCTACTTCATTTCTCTAATTTCATGTGTAAACTGGAAGTTGCTGTTGCCCCCAGTTTACAACAGAAACATCAGAAGGAATTATCCGTAATAAATGTTCAAAATTGCACAAAAAAAGGA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||