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Oryza sativa
cluster # 7833 cluster # 7833       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7833#0 length = 1681 sequences # 5  

consensusID : consensus_7833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1681
fasta sequence
                              [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA]

[+] EMBL AK073587             [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATAC                                         ]
[+] EMBL AK104985             [   CCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCT                    ]
[+] EMBL CB648865             [                                        CCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB648866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTGGTCATGAGTGATAAGCCATGAGGTGATCANTGTTGTATTGTGT                                                                          ]
[+] EMBL CA754236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA]


>consensus_7833#0 TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCC GGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTA CCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGG CTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGG CGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCC GCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGA GACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCA CCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAA GGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATA CCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCT GACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGAT CAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGT CATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGA CCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCT CGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAG GCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGG CTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGA GTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCT CGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGG CCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTT CCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCAT CAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGG CGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGA GCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAA GGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCG CCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGT CGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACT GGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAA A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)