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Oryza sativa
cluster # 7844 cluster # 7844       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7844#0 length = 2178 sequences # 4  
consensus_7844#1 length = 513 sequences # 1  

consensusID : consensus_7844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2178
fasta sequence
                              [CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCCCCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGCTCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCAGGGTGCTCAAAGACTACCCTTGCAAA-GGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGCCCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTCCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCATATGATTGCAGCGGCTTGTACTGTTTCCCCTGTGTTTTTCTTGGGTTTTGAGAGTATTGAGAGACAGAGGTTAACACTAGAAGATAACTCTGCCTGTTAATAACTCCCAAGGACTAATAAAGATCTCATCTTCCCCAAGGAAGATTGCAAGCTACTAATATGA]

[+] EMBL AK099085             [CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCCCCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGCTCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCAGGGTGCTCAAAGACTACCCTTGCAAAGGGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGCCCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTCCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCA                                                                                                                                                                   ]
[+] EMBL AK069052             [CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCCCCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGCTCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCAGGGTGCTCAAAGACTACCCTTGCAAA GGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGCCCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTCCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCA                                                                                                                                                                   ]
[+] EMBL AK099259             [CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCCCCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGCTCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGGGAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGGACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTCCGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAATTTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGAGCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAACCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAGGCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCGCGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGACGGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGATGCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTTCCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGTGAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTACAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAGAGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAAAATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGAGGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCTGCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCAGGGTGCTCAAAGACTACCCTTGCAAA GGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTTTCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGACGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGATGCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGAGAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATTATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGCCCAGGGCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTCCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCA                                                                                                                                                                   ]
[+] EMBL CF323162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCACCAGATGCGGAAGGTCGATATGAAATACTACGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAGCGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTGCAGGGAGGCGGGAATGGCTGCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCAGCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCATATGATTGCAGCGGCTTGTACTGTTTCCCCTGTGTTTTTCTTGGGTTTTGAGAGTATTGAGAGACAGAGGTTAACACTAGAAGATAACTCTGCCTGTTAATAACTCCCAAGGACTAATAAAGATCTCATCTTCCCCAAGGAAGATTGCAAGCTACTAATATGA]


>consensus_7844#0 CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCC CCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGC TCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGG GAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGG ACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTC CGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAAT TTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGA GCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAA CCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAG GCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCG CGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGAC GGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGAT GCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTT CCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGT GAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTA CAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAG AGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAA AATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGA GGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCT GCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCA GGGTGCTCAAAGACTACCCTTGCAAAGGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTT TCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGA CGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGAT GCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGA GAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATT ATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTGCGCCCAGGG CGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAATACTA CGCATCCATACACGCAAAATGCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGCAGAG CGTACCGAGCTTTTCACGGGCGCAGATCTTGAAGGCCTGTCCAGGGAGGCGGGAATGGCT GCCTTGAGGGAAAGTCTGAGGTCAGAGCGTTTTGTATGTGACGATATTCACTTCCAGGCC GCGCTAAGATCCTTGCGTCCATCACTTACACAATCAGTGGTTGATGAGTACTCAAATGCA GCCATCCATGGTCCATTGACGAGGAGAAAACACTAAAAGATGTATTATTCTGGCGCACAA GCATCAGTGTCGCCCATTGTTGATTCTGACTAGTTATCAGAACATTGTATCATCGGTCTG CTGTATATATTGACCAAAGTTGTGACATGTTCCCATATGATTGCAGCGGCTTGTACTGTT TCCCCTGTGTTTTTCTTGGGTTTTGAGAGTATTGAGAGACAGAGGTTAACACTAGAAGAT AACTCTGCCTGTTAATAACTCCCAAGGACTAATAAAGATCTCATCTTCCCCAAGGAAGAT TGCAAGCTACTAATATGA



consensusID : consensus_7844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence
                              [ANGCAATNGATGCTGCTCTTCTNGCGCCCAGGGCGTTTNGGATATGATCGCGGAAGGTCGATATGGAAATGACTACGCATCCATACACGCAAAATCGCCATTAGGAGATGATGTGGATCTTTGGAAGGTACCAGAGCGTACCGAGCTGNTTCACCGGGCGCCAGATCTGTGAAGGCCCTGTNCCAGGGAGCCGGGAATGGCTCCCTTGAGGGAAAGTCGTGAGGTCAGAACCGTTTTGTATGTGACGATATTCACTTGCCAGGCTGCGCTAAGATCCTGGCGTCCATCGCTTACACAATCCAGTGGGTTGATGAGTACTCAATATGGCNGCCCATCCCATGGTCTATTGACGAGGAGAAAACTATTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGGTCGCCCATTGTTGATTCNGACTATTAGTTATCAGAACTGGTATCATCGGTCTCNGTATATATTGACCAAGTNNGTGACTGGTCCCATANGATGCACCGGCTTGGTCCGGTC]

[+] EMBL BM419259             [ANGCAATNGATGCTGCTCTTCTNGCGCCCAGGGCGTTTNGGATATGATCGCGGAAGGTCGATATGGAAATGACTACGCATCCATACACGCAAAATCGCCATTAGGAGATGATGTGGATCTTTGGAAGGTACCAGAGCGTACCGAGCTGNTTCACCGGGCGCCAGATCTGTGAAGGCCCTGTNCCAGGGAGCCGGGAATGGCTCCCTTGAGGGAAAGTCGTGAGGTCAGAACCGTTTTGTATGTGACGATATTCACTTGCCAGGCTGCGCTAAGATCCTGGCGTCCATCGCTTACACAATCCAGTGGGTTGATGAGTACTCAATATGGCNGCCCATCCCATGGTCTATTGACGAGGAGAAAACTATTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGGTCGCCCATTGTTGATTCNGACTATTAGTTATCAGAACTGGTATCATCGGTCTCNGTATATATTGACCAAGTNNGTGACTGGTCCCATANGATGCACCGGCTTGGTCCGGTC]


>consensus_7844#1 ANGCAATNGATGCTGCTCTTCTNGCGCCCAGGGCGTTTNGGATATGATCGCGGAAGGTCG ATATGGAAATGACTACGCATCCATACACGCAAAATCGCCATTAGGAGATGATGTGGATCT TTGGAAGGTACCAGAGCGTACCGAGCTGNTTCACCGGGCGCCAGATCTGTGAAGGCCCTG TNCCAGGGAGCCGGGAATGGCTCCCTTGAGGGAAAGTCGTGAGGTCAGAACCGTTTTGTA TGTGACGATATTCACTTGCCAGGCTGCGCTAAGATCCTGGCGTCCATCGCTTACACAATC CAGTGGGTTGATGAGTACTCAATATGGCNGCCCATCCCATGGTCTATTGACGAGGAGAAA ACTATTAAAAGATGTATTATTCTGGCGCACAAGCATCAGTGGTCGCCCATTGTTGATTCN GACTATTAGTTATCAGAACTGGTATCATCGGTCTCNGTATATATTGACCAAGTNNGTGAC TGGTCCCATANGATGCACCGGCTTGGTCCGGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7844#0      CGTCTCCCTCCCAAAGCCCCGCCTGGTGATTCGCCGTCTCCCTCCGTCGCCGTGCCTTCC 60
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CCCGCCACCGTCCTGCTCACCGGCGTTCCGCCGGAACGACTTGAAGTCCACCTCTCGAGC 120
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      TCGGCGGCCTCCCCCTTAGGGCAGAAGCGGACGAGGCGAATGGAAGAGGTTAGGGGCAGG 180
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GAGAGCAAAGACCACCGCGGCGGCGGCGGCGGCGGCGGAGGTGATGGGGACGGCGAGCGG 240
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      ACGGGACGGTGGCGCGCCGAGGAGGTCATCGCTGGGAACCGCGCGGTTCTGGAGGCTCTC 300
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CGGGAGCTCGTGATGTATCCTGTCCTCTACGCACGGGAGGCCCGCGTGCTCGGCCTCAAT 360
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      TTTCCCAGAGGATTGCTGCTCCACGGCCCCTCTGGCACTGGAAAGAAAAGCATGGTCCGA 420
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GCTGTTGTTCGAGAATGTAATGCCCACCTCACAGTGATTGATTCAATTTCTGTGCATAAA 480
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CCCCACGCTGGAGAGGGGGAGAAGTTCATGCGAGAGGCTTTTACTGAAGCATATTCCCAG 540
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GCATCACAGGGTAGACCAGCCGTGATATTCATTGATGAACTTGATGACATATGTCCACCG 600
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CGTGGCAGTAGGAGAGAGCAAGGGTCCCGCATTGTTGGTCAGCTGTTGACTCTGATGGAC 660
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GGGAAGTCATCAAAGCTGCTTCCCCACCTAGTTGTTGTTGCATCTGCTACCAGGGTGGAT 720
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GCTATTGAGTCAGCACTGCGAAGGCCTGGGCGTTTTGACTCAGAGATAGAGGTTACTGTT 780
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CCTACAGCAGAAGAAAGGTTCGAGATTCTTAAGCTTTATACCAAGAATCTACATCTTGGT 840
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GAATGTGTTGATCTTCAATCTGTTGCTGCATCCTGCAATGGTTATGTTGGAGCTGATTTA 900
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CAAGCTTTATGTCGAGAAGCTGCAAGACGTGCTTATGGTAGATTATCAAGCTCATCAGAG 960
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      AGTGAGAATGTGCTAACGCTAATCATGGAGGATTGGGAGTCTGCTAAATCTGTGGCCAAA 1020
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      AATAGTGTGACAAGAGGGGTAACTAAAGAAATTCCAGCTGTTTCATGGGATGATATAGGA 1080
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GGTTTGAAAGCTGTTAAGAAAAAACTTCAGCAAGCTGTTGAATGGCCCATCAAGCATGCT 1140
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GCTTCATTTGATAGACTTGGAATATCACCTATCCGTGGGGTGCTATTGCATGGTCCACCA 1200
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GGGTGCTCAAAGACTACCCTTGCAAAGGCTGCTGCTCATGCTGCCCAAGCTTCTTTCTTT 1260
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      TCATTAAGTGGTGCTGAGTTATACTCCAAGTATGTTGGTGAAGGTGAAGCTTTGTTGCGA 1320
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      CGTACATTCCAGATGGCACGTCTTGCTTCTCCAAGCATTATATTTTTTGATGAGGCTGAT 1380
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GCAATTGCCCCTAAAAGAACTGGTCCCAGCGGGAACTCTAGTGGCAATGCCACGGTTGGA 1440
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GAAAGACTCTTATCAACTCTATTGACGGAAATGGATGGTTTAGAACTGGCTACGGGAATT 1500
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      ATTGTATTGGCTGCTACTAATCGCCCAAATGCAATTGATGCTGCTCTTCTG-CGCCCAGG 1559
consensus_7844#1      ----------------------------ANGCAATNGATGCTGCTCTTCTNGCGCCCAGG 32
                                                  * ***** **************  ********

consensus_7844#0      GCGTTTCGATATGGTTTTGTATGTTCCACCACCAGATGCGGAAGGTCGATATGAAAT--A 1617
consensus_7844#1      GCGTTTNGG---------ATATGATC-----------GCGGAAGGTCGATATGGAAATGA 72
                      ****** *           **** **           **************** **   *

consensus_7844#0      CTACGCATCCATACACGCAAAAT-GCCATTAGGAGATGATGTGGATCTTTGGAAGGTAGC 1676
consensus_7844#1      CTACGCATCCATACACGCAAAATCGCCATTAGGAGATGATGTGGATCTTTGGAAGGTACC 132
                      *********************** ********************************** *

consensus_7844#0      AGAGCGTACCGAGCT-TTTCAC-GGGCGC-AGATCT-TGAAGGCCTG--TCCAGGGAGGC 1730
consensus_7844#1      AGAGCGTACCGAGCTGNTTCACCGGGCGCCAGATCTGTGAAGGCCCTGTNCCAGGGAGCC 192
                      ***************  ***** ****** ****** ********     ******** *

consensus_7844#0      GGGAATGGCTGCCTTGAGGGAAAGTC-TGAGGTCAGAGC-GTTTTGTATGTGACGATATT 1788
consensus_7844#1      GGGAATGGCTCCCTTGAGGGAAAGTCGTGAGGTCAGAACCGTTTTGTATGTGACGATATT 252
                      ********** *************** ********** * ********************

consensus_7844#0      CACTT-CCAGGCCGCGCTAAGATCCTTGCGTCCATCACTTACACAATC-AGTGG-TTGAT 1845
consensus_7844#1      CACTTGCCAGGCTGCGCTAAGATCCTGGCGTCCATCGCTTACACAATCCAGTGGGTTGAT 312
                      ***** ****** ************* ********* *********** ***** *****

consensus_7844#0      GAGTACTCAA-ATG-CAGCCA--TCCATGGTCCATTGACGAGGAGAAAAC-ACTAAAAGA 1900
consensus_7844#1      GAGTACTCAATATGGCNGCCCATCCCATGGTCTATTGACGAGGAGAAAACTATTAAAAGA 372
                      ********** *** * ***    ******** ***************** * *******

consensus_7844#0      TGTATTATTCTGGCGCACAAGCATCAGTG-TCGCCCATTGTTGATTCTGACTA---GTTA 1956
consensus_7844#1      TGTATTATTCTGGCGCACAAGCATCAGTGGTCGCCCATTGTTGATTCNGACTATTAGTTA 432
                      ***************************** ***************** *****   ****

consensus_7844#0      TCAGAACATTGTATCATCGGTCTGCTGTATATATTGACCAAAGTTGTGACATGTTCCCAT 2016
consensus_7844#1      TCAGAAC-TGGTATCATCGGTCT-CNGTATATATTGACCAAGTNNGTGAC-TGGTCCCAT 489
                      ******* * ************* * ***************    ***** ** ******

consensus_7844#0      ATGATTGCAGCGGCTTGTACTGTTTCCCCTGTGTTTTTCTTGGGTTTTGAGAGTATTGAG 2076
consensus_7844#1      ANGAT-GCACCGGCTTGGTCCGGTC----------------------------------- 513
                      * *** *** *******  * * *                                    

consensus_7844#0      AGACAGAGGTTAACACTAGAAGATAACTCTGCCTGTTAATAACTCCCAAGGACTAATAAA 2136
consensus_7844#1      ------------------------------------------------------------
                                                                                  

consensus_7844#0      GATCTCATCTTCCCCAAGGAAGATTGCAAGCTACTAATATGA 2178
consensus_7844#1      ------------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)