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Oryza sativa
cluster # 7848 cluster # 7848       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7848#0 length = 2698 sequences # 4  
 consensus_7848#1 length = 544 sequences # 1  
consensusID : consensus_7848#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2698
fasta sequence 
                              [CGCTTGCTGCTTTCTTCTAGTCTTCTCCAATTATTCGCCCATCTCTCTCTCTCTTCTTCCTCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATCAGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATGGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCCTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGTCCATATTGTTTATGGAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGTCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATAACCAACTGTCCAAGTAGGGATTCATATCTTTCTACTAATTGCAGAATGTTTTCTTGGCTGAAGGAAGTTTAATCTAACTGTTCAAGTTAGTTGCTTGGTTAGCTGATAGTGATCCCTGTGTTTTCTAGTTGTTGATACTGCATATACATATATCTGTGACATATGGCTAGTTCTTGTTTGTTGTGTGTAGATAAGATACATACAAGATTCTGATCTCTGCAGCAAAAGAAACAAAGCTTCCTTTTTTCTCTTGTTTTATCCCCTAATATATCTCTTCTTTTGCAGTTCTAGCTAGCAATTTCACTGTAAAACATGTGTATTACCGATCAATACTGGCATATATCTGAACTTGATGCAATACATGTGTATTACTGATCAATACATAAAACTGAAAATGTGGAACATATCTGCTAATTATTTTCATGAGTGTGGCTTTGATTATTGTGATCTTGCCACTTGCCAGCAATGATGTTAGCTAGTGATGGGAATATCACCTGACCAAAGGAGGGACATGATTAACCTTGCTAATTAAGTAACAAGAAAAGGAGGAGGGGGCAAAAGAATTATGGAATGGGTTTTCTTGACCTGAAGACAAGTAGTAAGATTTGCTAATGCTTGCTTGCAAGATATGCATGCCTAACCACAAAACAAGGAGTTTGGCACTACAGAACTGAATGATGATTGCCTCTTGCTTGAAGGATGAAACTGCTGCCCATCTTTTGATCATGGCACCCCCTTCGCATATGCATGATTGCCCACACTTTTCTCCTCTTTTGGGCTCTGTACTATGGAGATATTCAAGCCATTTTCTTGAGATTTTCTCTGCAATGTAATGACCTGTTCTGTCCCTTGATGTTTCACTTGCAAAGGAGACTGTACTACAGCATCTCTCTCTCTAGTCTCTACCTCTCTTGATGTTTCACTTGCAAAGGAGATTGTACTACACCACCATCTCTCTCTACCAATCTCTCTCTCTCTCTCTCTAATTAGTTGCAAGTTTTGTTGGCATCTCTAACCACCTCTCCACACTCATGGTCATGGCCATGGCTAGCACATTTGTCACCTAGCTTGCATTGCATGGTCCTTTGGAAGATTCATGGGCCACACACACATGGTGACATTCATGCAAAGCTCCAGGCAGGTCTCCTTTATTGTGATTTGGTCAGCTAGCTGGTTTGTTACAAGATGCCCACAACCTTTGTCCTTTCAATTCAATGCAGTGTGCAGTGTGTGCCTGCAACTTTCATATACATGTTGTACCATCATGTGTCCTCTTCCTGGCTTGCAAAAATGTAATGGCTAATCACATCCATCATGCTTGCAAATTAAGCTAATTAATTAATCACAGGTGGCTAGCTAATTACCAACTGATGATGATGATTAGTGACAGGCAAAGATGATAATCTAGATATCTTGTTCTTCTCACTACTGTCTTGTCATTGTTGGCGTGGAGTGCAATGCTGCCGTTTGTGTGGCTCCAGAAAGGTTGCCGGCTTTGCTGCCCTTCTCTCCATGTTCTTGTCTGAATCCTGAACATTTTAACAACCGTGTCTTTTTCTCTTCTTCCTTTTCCTCTTTGCTGACAAGTTGATGGTTTTGAGATATCTATTGTTCTGCTTGTTTTTGTTTTTGCATGTGAAGTCATATTCAGATGGTTTGCAAGGATTAGAAGTCATGGGTGTACTGTGTGCAAATTGAACTTGTCAGGAACAGTGACTGAATTTTATTGTTCAGGCTTTGCTTGTCTGAACTCAAGAAGAGGTAGAGCTAGGGTGTTATTTTTTTTATCTGATTTATGTGATACATAATCAACTACCATTCGTTTGACAGAACAAGATTGATAGGTGCATGTTCAGAG]

[+] EMBL CF322848             [CGCTTGCTGCTTTCTTCTAGTCTTCTCCAATTATTCGCCCATCTCTCTCTCTCTTCTTCCTCCTCTCCTCCATGAAAGCTATGTAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATCAGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATGGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK067077             [                          CCAATTATTCGCCCATCTCTCTCTCTCTTCTTCCTCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATCAGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATGGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCCTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGTCCATATTGTTTATGGAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGTCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATAACCAACTGTCCAAGTAGGGATTCATATCTTTCTACTAATTGCAGAATGTTTTCTTGGCTGAAGGAAGTTTAATCTAACTGTTCAAGTTAGTTGCTTGGTTAGCTGATAGTGATCCCTGTGTTTTCTAGTTGTTGATACTGCATATACATATATCTGTGACATATGGCTAGTTCTTGTTTGTTGTGTGTAGATAAGATACATACAAGATTCTGATCTCTGCAGCAAAAGAAACAAAGCTTCCTTTTTTCTCTTGTTTTATCCCCTAATATATCTCTTCTTTTGCAGTTCTAGCTAGCAATTTCACTGTAAAACATGTGTATTACCGATCAATACTGGCATATATCTGAACTTGATGCAATACATGTGTATTACTGATCAATACATAAAACTGAAAATGTGGAACATATCTGCTAATTATTTTCATGAGTGTGGCTTTGATTATTGTGATCTTGCCACTTGCCAGCAATGATGTTAGCTAGTGATGGGAATATCACCTGACCAAAGGAGGGACATGATTAACCTTGCTAATTAAGTAACAAGAAAAGGAGGAGGGGGCAAAAGAATTATGGAATGGGTTTTCTTGACCTGAAGACAAGTAGTAAGATTTGCTAATGCTTGCTTGCAAGATATGCATGCCTAACCACAAAACAAGGAGTTTGGCACTACAGAACTGAATGATGATTGCCTCTTGCTTGAAGGATGAAACTGCTGCCCATCTTTTGATCATGGCACCCCCTTCGCATATGCATGATTGCCCACACTTTTCTCCTCTTTTGGGCTCTGTACTATGGAGATATTCAAGCCATTTTCTTGAGATTTTCTCTGCAATGTAATGACCTGTTCTGTCCCTTGATGTTTCACTTGCAAAGGAGACTGTACTACAGCATCTCTCTCTCTAGTCTCTACCTCTCTTGATGTTTCACTTGCAAAGGAGATTGTACTACACCACCATCTCTCTCTACCAATCTCTCTCTCTCTCTCTCTAATTAGTTGCAAGTTTTGTTGGCATCTCTAACCACCTCTCCACACTCATGGTCATGGCCATGGCTAGCACATTTGTCACCTAGCTTGCATTGCATGGTCCTTTGGAAGATTCATGGGCCACACACACATGGTGACATTCATGCAAAGCTCCAGGCAGGTCTCCTTTATTGTGATTTGGTCAGCTAGCTGGTTTGTTACAAGATGCCCACAACCTTTGTCCTTTCAATTCAATGCAGTGTGCAGTGTGTGCCTGCAACTTTCATATACATGTTGTACCATCATGTGTCCTCTTCCTGGCTTGCAAAAATGTAATGGCTAATCACATCCATCATGCTTGCAAATTAAGCTAATTAATTAATCACAGGTGGCTAGCTAATTACCAACTGATGATGATGATTAGTGACAGGCAAAGATGATAATCTAGATATCTTGTTCTTCTCACTACTGTCTTGTCATTGTTGGCGTGGAGTGCAATGCTGCCGTTTGTGTGGCTCCAGAAAGGTTGCCGGCTTTGCTGCCCTTCTCTCCATGTTCTTGTCTGAATCCTGAACATTTTAACAACCGTGTCTTTTTCTCTTCTTCCTTTTCCTCTTTGCTGACAAGTTGATGGTTTTGAGATATCTATTGTTCTGCTTGTTTTTGTTTTTGCATGTGAAGTCATATTCAGATGGTTTGCAAGGATTAGAAGTCATGGGTGTACTGTGTGCAAATTGAACTTGTCAGGAACAGTGACTGAATTTTATTGTTCAGGCTTTGCTTGTCTGAACTCAAGAAGAGGTAGAGCTAGGGTGTTATTTTTTTTATCTGATTTATGTGATACATAATCAACTACCATTCGTTTGACAGAACAAGATTGATAGGTGCATGTTCAGAG]
[+] EMBL AK067588             [                          CCAATTATTCGCCCATCTCTCTCTCTCTTCTTCCTCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATCAGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATGGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCCTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGTCCATATTGTTTATGGAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGTCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATAACCAACTGTCCAAGTAGGGATTCATATCTTTCTACTAATTGCAGAATGTTTTCTTGGCTGAAGGAAGTTTAATCTAACTGTTCAAGTTAGTTGCTTGGTTAGCTGATAGTGATCCCTGTGTTTTCTAGTTGTTGATACTGCATATACATATATCTGTGACATATGGCTAGTTCTTGTTTGTTGTGTGTAGATAAGATACATACAAGATTCTGATCTCTGCAGCAAAAGAAACAAAGCTTCCTTTTTTCTCTTGTTTTATCCCCTAATATATCTCTTCTTTTGCAGTTCTAGCTAGCAATTTCACTGTAAAACATGTGTATTACCGATCAATACTGGCATATATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF309326             [                           ccATTATTCGCCCATCTCTCTCTCTCTTCTTCCTCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGTGAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGATTAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGCAAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATCAGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATGGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTG AAATTAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_7848#0
CGCTTGCTGCTTTCTTCTAGTCTTCTCCAATTATTCGCCCATCTCTCTCTCTCTTCTTCC
TCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGT
GAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGAT
TAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGC
AAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATC
AGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATG
GGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTC
AGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATC
TCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTT
GGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCC
TTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAA
CTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGT
CCATATTGTTTATGGAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGT
CACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATA
ACCAACTGTCCAAGTAGGGATTCATATCTTTCTACTAATTGCAGAATGTTTTCTTGGCTG
AAGGAAGTTTAATCTAACTGTTCAAGTTAGTTGCTTGGTTAGCTGATAGTGATCCCTGTG
TTTTCTAGTTGTTGATACTGCATATACATATATCTGTGACATATGGCTAGTTCTTGTTTG
TTGTGTGTAGATAAGATACATACAAGATTCTGATCTCTGCAGCAAAAGAAACAAAGCTTC
CTTTTTTCTCTTGTTTTATCCCCTAATATATCTCTTCTTTTGCAGTTCTAGCTAGCAATT
TCACTGTAAAACATGTGTATTACCGATCAATACTGGCATATATCTGAACTTGATGCAATA
CATGTGTATTACTGATCAATACATAAAACTGAAAATGTGGAACATATCTGCTAATTATTT
TCATGAGTGTGGCTTTGATTATTGTGATCTTGCCACTTGCCAGCAATGATGTTAGCTAGT
GATGGGAATATCACCTGACCAAAGGAGGGACATGATTAACCTTGCTAATTAAGTAACAAG
AAAAGGAGGAGGGGGCAAAAGAATTATGGAATGGGTTTTCTTGACCTGAAGACAAGTAGT
AAGATTTGCTAATGCTTGCTTGCAAGATATGCATGCCTAACCACAAAACAAGGAGTTTGG
CACTACAGAACTGAATGATGATTGCCTCTTGCTTGAAGGATGAAACTGCTGCCCATCTTT
TGATCATGGCACCCCCTTCGCATATGCATGATTGCCCACACTTTTCTCCTCTTTTGGGCT
CTGTACTATGGAGATATTCAAGCCATTTTCTTGAGATTTTCTCTGCAATGTAATGACCTG
TTCTGTCCCTTGATGTTTCACTTGCAAAGGAGACTGTACTACAGCATCTCTCTCTCTAGT
CTCTACCTCTCTTGATGTTTCACTTGCAAAGGAGATTGTACTACACCACCATCTCTCTCT
ACCAATCTCTCTCTCTCTCTCTCTAATTAGTTGCAAGTTTTGTTGGCATCTCTAACCACC
TCTCCACACTCATGGTCATGGCCATGGCTAGCACATTTGTCACCTAGCTTGCATTGCATG
GTCCTTTGGAAGATTCATGGGCCACACACACATGGTGACATTCATGCAAAGCTCCAGGCA
GGTCTCCTTTATTGTGATTTGGTCAGCTAGCTGGTTTGTTACAAGATGCCCACAACCTTT
GTCCTTTCAATTCAATGCAGTGTGCAGTGTGTGCCTGCAACTTTCATATACATGTTGTAC
CATCATGTGTCCTCTTCCTGGCTTGCAAAAATGTAATGGCTAATCACATCCATCATGCTT
GCAAATTAAGCTAATTAATTAATCACAGGTGGCTAGCTAATTACCAACTGATGATGATGA
TTAGTGACAGGCAAAGATGATAATCTAGATATCTTGTTCTTCTCACTACTGTCTTGTCAT
TGTTGGCGTGGAGTGCAATGCTGCCGTTTGTGTGGCTCCAGAAAGGTTGCCGGCTTTGCT
GCCCTTCTCTCCATGTTCTTGTCTGAATCCTGAACATTTTAACAACCGTGTCTTTTTCTC
TTCTTCCTTTTCCTCTTTGCTGACAAGTTGATGGTTTTGAGATATCTATTGTTCTGCTTG
TTTTTGTTTTTGCATGTGAAGTCATATTCAGATGGTTTGCAAGGATTAGAAGTCATGGGT
GTACTGTGTGCAAATTGAACTTGTCAGGAACAGTGACTGAATTTTATTGTTCAGGCTTTG
CTTGTCTGAACTCAAGAAGAGGTAGAGCTAGGGTGTTATTTTTTTTATCTGATTTATGTG
ATACATAATCAACTACCATTCGTTTGACAGAACAAGATTGATAGGTGCATGTTCAGAG

consensusID : consensus_7848#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 544
fasta sequence 
                              [GGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCCTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGTCCATATTGTTAAAAAAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGTCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATAACCAACTGTCCAGGTAGGGAGTTCATATCTTTCTACTAAAAAAAAAAAAAAAAAAAAAAACAC]

[-] EMBL CF309327             [GGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTCAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATCTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTTGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCCTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGTCCATATTGTTAAAAAAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGTCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATAACCAACTGTCCAGGTAGGGAGTTCATATCTTTCTACTAAAAAAAAAAAAAAAAAAAAAAACAC]




>consensus_7848#1
GGGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATT
CAGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGAT
CTCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATT
TGGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGC
CTTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGA
ACTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGG
TCCATATTGTTAAAAAAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTG
TCACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCAT
AACCAACTGTCCAGGTAGGGAGTTCATATCTTTCTACTAAAAAAAAAAAAAAAAAAAAAA
ACAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7848#0      CGCTTGCTGCTTTCTTCTAGTCTTCTCCAATTATTCGCCCATCTCTCTCTCTCTTCTTCC 60
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TCCTCTCCTCCATGAAAGCTAGGGAAATTAACTAAGGGCAGTGGTGCACCACAAGTTGGT 120
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GAAGCTGCCAGCATGATCTGATGATGATGATGATCCACCTCTCTCATCTGTGTTCTTGAT 180
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TAATTACGGATCAATCGATCAGGTCATGCTGTAGTTTCATCTGCTGGTTGGGAGCACAGC 240
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      AAAAAAAAACCCTAACTTTGTAGCCGGATTTGCATGGATTAATCTGCTAGGTAGCTCATC 300
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      AGATTCTTTGAGAGTTTGCCTTGCTCTTCTGCAGATGAAGACGTAATCTTTGAACAGATG 360
consensus_7848#1      -----------------------------------------------------------G 1
                                                                                 *

consensus_7848#0      GGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTC 420
consensus_7848#1      GGATTCTCAACTCTCAAGGTGAGGTAGTCATCAATCCAATCCATATACCTGCTCAAATTC 61
                      ************************************************************

consensus_7848#0      AGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATC 480
consensus_7848#1      AGTTTTAATTAAAGACTAGCTGCTTCTATGGAGTTAATTAGGGATCCTTTTTTATAGATC 121
                      ************************************************************

consensus_7848#0      TCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTT 540
consensus_7848#1      TCTCTTGATCTGTTTCTTAGTCTGTTCTTTCTTAATAAGGCATATATACCTCTTGGATTT 181
                      ************************************************************

consensus_7848#0      GGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCC 600
consensus_7848#1      GGATTTTCTTGAAAATTAAGGTAGTTTATGAGTTGGATGTGTTGTGTTATCTGCCCAGCC 241
                      ************************************************************

consensus_7848#0      TTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAA 660
consensus_7848#1      TTAATTTAACTGTGCTTCCTAAAAATTCGTTTGATTTGATGGTAGCATCTGAATTGTGAA 301
                      ************************************************************

consensus_7848#0      CTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGT 720
consensus_7848#1      CTCATCTTTGGAGCTTGGACTTTAGACCAGGTGCCTTAATTCCTTAACATAAGATTTGGT 361
                      ************************************************************

consensus_7848#0      CCATATTGTTTATGGAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGT 780
consensus_7848#1      CCATATTGTTAAAAAAGCTTCTTATCAAGAAATACTCTTTTGATTAGGGAGTCCCCTTGT 421
                      ********** *   *********************************************

consensus_7848#0      CACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATA 840
consensus_7848#1      CACTTTCTTCAGTTGTGCAGGTACATATGACATATCTGTATTAAACTGATGACATTCATA 481
                      ************************************************************

consensus_7848#0      ACCAACTGTCCAAGTAGGGA-TTCATATCTTTCTACTAATTGCAGAATGTTTTCTTGGCT 899
consensus_7848#1      ACCAACTGTCCAGGTAGGGAGTTCATATCTTTCTACTAAAAAAAAAA--------AAAAA 533
                      ************ ******* ******************    * **             

consensus_7848#0      GAAGGAAGTTTAATCTAACTGTTCAAGTTAGTTGCTTGGTTAGCTGATAGTGATCCCTGT 959
consensus_7848#1      AAAAAAAACAC------------------------------------------------- 544
                       **  **                                                     

consensus_7848#0      GTTTTCTAGTTGTTGATACTGCATATACATATATCTGTGACATATGGCTAGTTCTTGTTT 1019
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GTTGTGTGTAGATAAGATACATACAAGATTCTGATCTCTGCAGCAAAAGAAACAAAGCTT 1079
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      CCTTTTTTCTCTTGTTTTATCCCCTAATATATCTCTTCTTTTGCAGTTCTAGCTAGCAAT 1139
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TTCACTGTAAAACATGTGTATTACCGATCAATACTGGCATATATCTGAACTTGATGCAAT 1199
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      ACATGTGTATTACTGATCAATACATAAAACTGAAAATGTGGAACATATCTGCTAATTATT 1259
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TTCATGAGTGTGGCTTTGATTATTGTGATCTTGCCACTTGCCAGCAATGATGTTAGCTAG 1319
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TGATGGGAATATCACCTGACCAAAGGAGGGACATGATTAACCTTGCTAATTAAGTAACAA 1379
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GAAAAGGAGGAGGGGGCAAAAGAATTATGGAATGGGTTTTCTTGACCTGAAGACAAGTAG 1439
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TAAGATTTGCTAATGCTTGCTTGCAAGATATGCATGCCTAACCACAAAACAAGGAGTTTG 1499
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GCACTACAGAACTGAATGATGATTGCCTCTTGCTTGAAGGATGAAACTGCTGCCCATCTT 1559
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TTGATCATGGCACCCCCTTCGCATATGCATGATTGCCCACACTTTTCTCCTCTTTTGGGC 1619
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TCTGTACTATGGAGATATTCAAGCCATTTTCTTGAGATTTTCTCTGCAATGTAATGACCT 1679
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GTTCTGTCCCTTGATGTTTCACTTGCAAAGGAGACTGTACTACAGCATCTCTCTCTCTAG 1739
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TCTCTACCTCTCTTGATGTTTCACTTGCAAAGGAGATTGTACTACACCACCATCTCTCTC 1799
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TACCAATCTCTCTCTCTCTCTCTCTAATTAGTTGCAAGTTTTGTTGGCATCTCTAACCAC 1859
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      CTCTCCACACTCATGGTCATGGCCATGGCTAGCACATTTGTCACCTAGCTTGCATTGCAT 1919
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GGTCCTTTGGAAGATTCATGGGCCACACACACATGGTGACATTCATGCAAAGCTCCAGGC 1979
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      AGGTCTCCTTTATTGTGATTTGGTCAGCTAGCTGGTTTGTTACAAGATGCCCACAACCTT 2039
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TGTCCTTTCAATTCAATGCAGTGTGCAGTGTGTGCCTGCAACTTTCATATACATGTTGTA 2099
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      CCATCATGTGTCCTCTTCCTGGCTTGCAAAAATGTAATGGCTAATCACATCCATCATGCT 2159
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TGCAAATTAAGCTAATTAATTAATCACAGGTGGCTAGCTAATTACCAACTGATGATGATG 2219
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      ATTAGTGACAGGCAAAGATGATAATCTAGATATCTTGTTCTTCTCACTACTGTCTTGTCA 2279
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TTGTTGGCGTGGAGTGCAATGCTGCCGTTTGTGTGGCTCCAGAAAGGTTGCCGGCTTTGC 2339
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TGCCCTTCTCTCCATGTTCTTGTCTGAATCCTGAACATTTTAACAACCGTGTCTTTTTCT 2399
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      CTTCTTCCTTTTCCTCTTTGCTGACAAGTTGATGGTTTTGAGATATCTATTGTTCTGCTT 2459
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GTTTTTGTTTTTGCATGTGAAGTCATATTCAGATGGTTTGCAAGGATTAGAAGTCATGGG 2519
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      TGTACTGTGTGCAAATTGAACTTGTCAGGAACAGTGACTGAATTTTATTGTTCAGGCTTT 2579
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GCTTGTCTGAACTCAAGAAGAGGTAGAGCTAGGGTGTTATTTTTTTTATCTGATTTATGT 2639
consensus_7848#1      ------------------------------------------------------------
                                                                                  

consensus_7848#0      GATACATAATCAACTACCATTCGTTTGACAGAACAAGATTGATAGGTGCATGTTCAGAG 2698
consensus_7848#1      -----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)