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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7851#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3720 fasta sequence
[ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT-GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTACTT]
[+] EMBL AK073897 [ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAGACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATAT ]
[+] EMBL AK102910 [ CTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACCGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTACTT]
[+] EMBL OSS4665A [ GCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAG AAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGGATGCCAGTACATATGACCTAGTGGAGCGAATTCAGTATCTTTTTGTACGNGTGGGTTAAGG ]
[+] EMBL CF322691 [ TCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCT ]
consensusID : consensus_7851#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 372 fasta sequence
[ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAGTTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGAAAAAAAAAAAAAAAAA]
[+] EMBL AU086069 [ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAGTTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7851#0 ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAA 60
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCA 120
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGA 180
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCA 240
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCC 300
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTT 360
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGC 420
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTG 480
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGT 540
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATG 600
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGT 660
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAA 720
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGA 780
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATG 840
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTC 900
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTC 960
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGC 1020
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTG 1080
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTC 1140
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTG 1200
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAA 1260
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TGCAGTATCTTTTTGTACGTGTGGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTG 1320
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACT 1380
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGC 1440
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTG 1500
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGG 1560
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGC 1620
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATG 1680
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTC 1740
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATA 1800
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAA 1860
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTG 1920
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAG 1980
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATC 2040
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAAT 2100
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACC 2160
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCT 2220
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAA 2280
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAA 2340
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATA 2400
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGC 2460
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTC 2520
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGG 2580
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCT 2640
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACT 2700
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTG 2760
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGT 2820
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCA 2880
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGA 2940
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAG 3000
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 AGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTT 3060
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 ACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACC 3120
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTA 3180
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 GGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATA 3240
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 TAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAG 3300
consensus_7851#1 ------------------------------------------------------------
consensus_7851#0 CAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAG 3360
consensus_7851#1 ----ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAG 56
**************************************** ***************
consensus_7851#0 TTCTTGC-AGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTG 3419
consensus_7851#1 TTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTG 116
******* ****************************************************
consensus_7851#0 CCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAA 3479
consensus_7851#1 CCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAA 176
****************************************** *****************
consensus_7851#0 AATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCA-TGCCG 3538
consensus_7851#1 AATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCG 236
***************************************************** *****
consensus_7851#0 ATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGA 3598
consensus_7851#1 ATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGA 296
************************************************************
consensus_7851#0 GCCTGTATATCGTATTAGCTTCTGAATGCAGGGAA-TAATGTGTTTAAGGCTTCTTGTGA 3657
consensus_7851#1 GCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGA 356
********************************* ************************
consensus_7851#0 ACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTA 3717
consensus_7851#1 AAAAAAAAAAAAAAAA-------------------------------------------- 372
* * * * *
consensus_7851#0 CTT 3720
consensus_7851#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||