These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7851#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3720 fasta sequence [ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT-GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTACTT] [+] EMBL AK073897 [ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAGACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATAT ] [+] EMBL AK102910 [ CTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAAAACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCACCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGATTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACCGTCTTCTCCAATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCCAAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTTTTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGCAAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTGCTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGTTTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATGAGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGTACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAATTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGAAGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATGACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAATGCAGTATCTTTTTGTACGTGT GGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAGACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATCGTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAATTGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACCATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCTGGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAATGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAAAGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATACCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGCTTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTCGGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGGTTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCTCAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACTATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTGTGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGTCAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCATGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGAGGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAGAGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTTACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACCCAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTAGGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATATAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAGCAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAGTTCTTGCAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGAATAATGTGTTTAAGGCTTCTTGTGAACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTACTT] [+] EMBL OSS4665A [ GCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTCCCCCAACGCCAGCGGAG AAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTCATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGCACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTGACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTCAGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTGTTGGAGGCCGGGTTATACGTGCCGAGAAGGATGCCAGTACATATGACCTAGTGGAGCGAATTCAGTATCTTTTTGTACGNGTGGGTTAAGG ] [+] EMBL CF322691 [ TCACTGGAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACTTTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGCAGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTGGTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGGCCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGCTTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATGCTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTCCAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATAAGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAAAACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTGCT ] consensusID : consensus_7851#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 372 fasta sequence [ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAGTTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGAAAAAAAAAAAAAAAAA] [+] EMBL AU086069 [ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAGTTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTGCCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAAAATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCGATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGAGCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7851#0 ATCAGTTGTGTGCCATTCTCGTCTCTTCTCCGCGACGCGTTCGCTTTCTCTCCCACCCAA 60 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AACCCCCAGAGAGGGAAGAGAAACGCCTCCCTCCCCTCTCCTCCCCCGACCCACCCTGCA 120 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CCTCCTTCCTCGTCGACGCCATGGCAGCACCGGAGTGAAGCAGCCAGCCAGCCGCCCGGA 180 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTTCACCATTTGGTCCCGGGTTTCGCCCGGATCTGGGTCTCTCTTCAACAGTCTTCTCCA 240 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ATCTGGCGGTGCTATAGCTCGCCGCGCCCGGTTGGGGACAAGGCCCAGTAGGCGCTAGCC 300 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AAACAGTGTTGAGCGCCTCCTCCCCTCCTCGCGCCTCGGCGCACGGCCGGCGAGAAGGTT 360 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGAGGGGCGGCGAGCTTCTTCAATCTGCCTCCATCTCGGTTTGAATCGAGTGGTGTAGC 420 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AAATAACATCATTTTCGGAGGCAATGGCGGCATATAAGTTGGGTGTGGAGGTTGCAAGTG 480 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CTCATGACCTGATGCCCAAGGATGGGCAAGGTTCAGCAAGTGCCTGTGTCGAGCTTACGT 540 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGATGGCCAGCGGTTCCGCACGGCTATCAAGGACAAGGATCTGAACCCAGTGTGGAATG 600 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGCGCTTCTACTTCAACGTTTCGGATCCGTCTAATCTTCCTGAGCTTGCGCTTGAAGCGT 660 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACGTCTACAACATCAACAGATCCATTGATGGTTCAAGGTCCTTCCTTGGCAAGGTCAGAA 720 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGCTGGAACCTCATTCGTGCCATTCCCTGATGCGGTTGTCATGCATTATCCACTGGAGA 780 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGCGTGGGATGTTCTCACGTGTGAAAGGGGAACTGGGTCTGAAAGTATACATTACCAATG 840 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACCCATCCATCAAAGCTTCAAACCCTCTCCCAGCAATGGATCCTGTTTCAAACAATCCTC 900 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CCCCAACGCCAGCGGAGCAAATAGCAACTGATATAACCGGTACAAATCTCAGCACAACTC 960 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ATGAGCACAGGGCTGAGGTGAAAACATTGCACACCATAGCTAAGGAGGTGCAGCATCAGC 1020 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACCATGGGCATGGCCATCTACCAGCTTCCTTTCCCGACCAACCTTCCAAGTATGCTGTTG 1080 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACCAGATGAAACCAGAACCTCAACAACCCAAGATTGTAAGAATGTATTCAGCAGCCTCTC 1140 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGCAACCCATGGACTATGCACTCAAAGAAACTAGTCCATTTCTTGGTGGCGGACAGGTTG 1200 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGGAGGCCGGGTTATACGTGCCGAGAAGCATGCCAGTACATATGACCTAGTGGAGCGAA 1260 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TGCAGTATCTTTTTGTACGTGTGGTTAAGGCACGGGACTTGCCTGACATGGATGTCACTG 1320 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GAAGCCTAGATCCTTATGTTGAAGTGAGAGTTGGCAACTACAGGGGTATAACTAGGCACT 1380 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGAGAAGCAGAAGAATCCAGAGTGGAATGCGGTCTTTGCTTTTTCCAGAGACCGTATGC 1440 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGGCAACTATCCTTGAAGTTGTTGTCAAAGACAAGGATTTGCTAAAAGATGACTTTGTTG 1500 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GTCTGGTGCGATTTGATCTGAATGATGTTCCGATGCGTGTGCCCCCTGACAGTCCATTGG 1560 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CCCCAGAATGGTACCGCCTCGTTCATAAAACTGGGGATAAGTCAAGAGGCGAGCTGATGC 1620 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGCAGTTTGGATCGGCACCCAAGCCGATGAGGCATTTCCTGACGCATGGCATTCAGATG 1680 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CTGCAACACTTGAGGATCCATCTGCTGTAACACACATGAAGTCTAAAGTTTACCATGCTC 1740 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CAAGACTCTGGTACCTGCGAGTCAATATAATTGAGGCCCAAGATATTGCCATAACTGATA 1800 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGACACGCTATCCAGATGTTTTTGTAAGGGCACAAGTGGGGCATCAGCACGGGAGGACAA 1860 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AACCTGTTCAAGCTAGAAATTTCAACCCATTCTGGAATGAGGATCTAATGTTTGTGGCTG 1920 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CTGAACCTTTTGAGGATCACCTTATTCTTTCCCTTGAAGATCGTGTAGCTCCTAACAAAG 1980 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACGAGGTGCTTGGCCGTGTAATTATACCGTTGACAATGATTGATAGAAGAGCCGATGATC 2040 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GTATTGTCCATGGGAAATGGTTCAATCTTGAGAAGCCGGTACTTATTGATGTGGATCAAT 2100 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TGAAGAAGGAGAAGTTCTCTACTCGGCTTCATCTTCGTCTCTGCCTTGATGGAGGGTACC 2160 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ATGTTCTAGATGAGTCCACTAACTACAGCAGTGACCTCAGACCAACAGCCAAGCAACTCT 2220 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GGAAACCGTCCATTGGTTTGCTTGAGCTTGGAATCCTGGGTGCTCAAGGGATTGTTCCAA 2280 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TGAAAACACGGGATGGAAAAGGTTCATCAGACACTTACTGTGTTGCTAAGTATGGTTCAA 2340 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGTGGGTACGGACACGTACCATCGTGAACAACCCGGGCCCCAAATTCAATGAACAATATA 2400 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CCTGGGAAGTTTATGATCCTGCAACAGTCCTGACTGTCGGTGTTTTTGACAATGGCCAGC 2460 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTGGAGAGAAAGGTGGTGAGAAGACGTCCAGTTCTAAAGATGCGAAAATCGGCAAGGTTC 2520 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GGATTCGTCTTTCCACTCTTGAAACTGGCCGTGTCTACACTCACTCATATCCCCTCCTGG 2580 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TTCTACATCCATCGGGGGTAAAAAAGATGGGTGAATTGCACTTAGCCATACGATTTTCCT 2640 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CAACTTCATTAGTAAACATGATGTACCTGTACTCTCGACCTTTGCTACCAAAGATGCACT 2700 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ATGTACGCCCAATACCAGTCCTTCAGGTTGACATGCTGCGCCATCAAGCTGTCCAGATTG 2760 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TGTCTGCCCGACTTAGCCGGATGGAACCACCTCTGAGAAAGGAAGTTGTTGAGTACATGT 2820 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CAGATGTTGATTCTCACTTGTGGAGCATGAGACGAAGCAAAGCCAACTTCTTCAGGCTCA 2880 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TGTCAGTCTTCTCAGGCTTGTTTGCAGTTAGCAAGTGGTTTAATGGTGTGTGTTCATGGA 2940 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GGAACCCCATTACCACTGTGCTGGTTCACATCCTATTTATAATGTTGGTGTGCTTTCCAG 3000 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 AGCTCATACTCCCAACAGTGTTCTTATACATGTTTCTTATAGGGGTTTGGAACTATCGTT 3060 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 ACCGACCTTGCTATCCTCCACACATGAACACTAAGATCTCTCATGCGGAGGCTGTCCACC 3120 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CAGATGAACTTGACGAAGAGTTCGATACATTCCCAACAAGCAGGAGTCCTGATGTTATTA 3180 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 GGATGAGGTATGATAGGCTGAGGAGTGTTGCTGGAAGAATACAGACTGTGGTAGGTGATA 3240 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 TAGCAACTCAAGGGGAGAGGGTTCAAGCACTGCTTAGCTGGAGGGATCCTCGGGCCACAG 3300 consensus_7851#1 ------------------------------------------------------------ consensus_7851#0 CAATATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATGTTACACCACTCCAAG 3360 consensus_7851#1 ----ATTTGTCCTCTTTTGTCTCATAGCAGCAATAGTCCTGTATNTTACACCACTCCAAG 56 **************************************** *************** consensus_7851#0 TTCTTGC-AGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTG 3419 consensus_7851#1 TTCTTGCGAGCATTGGCAGGGTTCTATGTCATGAGGCACCCGAGGTTCAGATATAGGTTG 116 ******* **************************************************** consensus_7851#0 CCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGGCCGACAGCATGCTATAA 3479 consensus_7851#1 CCTTCAACGCCAGTGAATTTCTTCAGACGACTGCCAGCAAGGACCGACAGCATGCTATAA 176 ****************************************** ***************** consensus_7851#0 AATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCA-TGCCG 3538 consensus_7851#1 AATAGCTGCCATCTGGTGGCCTTATCATTGTGATAAATTGGATGGAGTACTCCNATGCCG 236 ***************************************************** ***** consensus_7851#0 ATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGA 3598 consensus_7851#1 ATTACTGTAGTCTGGCTTCGTTTTGTTGTTATTGTAACTGTGTGTTCTTAGTACTTGAGA 296 ************************************************************ consensus_7851#0 GCCTGTATATCGTATTAGCTTCTGAATGCAGGGAA-TAATGTGTTTAAGGCTTCTTGTGA 3657 consensus_7851#1 GCCTGTATATCGTATTAGCTTCTGAATGCAGGGNNATAATGTGTTTAAGGCTTCTTGTGA 356 ********************************* ************************ consensus_7851#0 ACTATCAGATTTTGGAGTTGTACTGGTCATTTTAAATATCTAGTTGCCCAATATATAGTA 3717 consensus_7851#1 AAAAAAAAAAAAAAAA-------------------------------------------- 372 * * * * * consensus_7851#0 CTT 3720 consensus_7851#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||