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Oryza sativa
cluster # 7853 cluster # 7853       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7853#0 length = 2396 sequences # 2  
consensus_7853#1 length = 675 sequences # 3  

consensusID : consensus_7853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2396
fasta sequence
                              [CAACGAAACCGAGCCCAACCCACTTTGCCCCGCCTCCACCCTACGGCGCCGGCGGCCATGCAGCGCCGCCGCCACCCCCTCCTCCTCCTCCCCCGCCGCCGCCCGCCGTCCAGAACCCTACTCTCCCGCCTGCTCTCCTCCTCGCCGCCCGCCAGCGGCGGCGGCGGCGGCGGGGGAGGAGGAGGGGTGGCGGTGAAGCAGGTGACGCGGGGGAACCTGGCGGAGGCGCTGGAGGAGCTCCGCGCGCGGGTGCGGGGCGCGGCGTTCGTGGGGATCGACCTGGAGATGAGCGGCGTGACGAGCGCGCCGTGGAGGGACACCCTCGAGCTCGACCGCGCCGACGTCCGCTACCTCAAGCTCCGCGACTCCGCGGAGCGGTTCGCGGCCCTGCAGCTCGGCGTCTGCCCCTTCCGCTGGGACCCCGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAAAATGCGTCCTGCTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAACACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAGGATGGCGTATCAGAGAAGAGAGTAGTTTATACAGACACCAATGAAGACAAGATATCCTTGATGAAAAATGTTCGGGAAGATCTACTAAAAAGCAGGGAAGCAAAAGTCAAATCAGCAGTAGGGATCCGTCATGTCATTGATCTTCTTGCCTCAGAAAGGAAATTGATTGTTGGTCATAGTTGTTTCCTAGATATTGCACAAATCTACAGCAAATTTGTTGGTCCTCTTCCTTCATCCATGGAGGAATTTGCCTTGAGTATCAACAGAATGTTCCCACATATGGCAGATACCAGGCATCTTATGTCTGTTAATGACGCGGTTCAGTATCGTATGAGGCACAAAAGCAAATCACTTTCGTCAGCCTTTTCATTGTTGTGCCCTGCACTTCATGCACCTGATGAGAAGTCATCCACCCTTCCTTCTGTGAGAATTGAAGTCGAGGCAGATGAAACAGTGTTATCTTGCTTCACTTCAGGTGCTAAGCATGAAGCAGGTTATGATGCATTCATGACTGGATGTGTTTTTGTTCAGCTCTGTGCTTATCATGGCATTAAATTTGAGCAACTCTCTCCCCTGGAGGACCTAGCAACAAACATTAATCTGAAGAAACACATCAATCTGCTGCCCCCATGCTGGAACAGTGGAACAGTGCTTGATTTGAGTACTGGCACGGAGAGACCAGATGCAGGTTATAAGCGTAGATATCCTGCTGCCGTGTATGACAACGTCATTCTTATCTGGGGATTCCAGTCTAAGGTGAGACCAAAGGATATAAAGGACTGCATCTGCAAAGTGTTTGGTCGAGCTTCTGTTACATCAGTCTTCCCGATTGATTCCACTGCGGTTCTTGTTCAATTCAGCAAACAAGAGTCTGTAAACGATTTCTTGGATCTGAAGGCTACCTTAGAGAGTGCAGATAGTGCTATTTCAGTCTTGCACCCTTTGTCAACTATACTGGAAGGAGGCAAAACACGAGCGGCAAAATATGATACCTACAGAGATATTTGCCGCTCCTCTGTATCAAAGTTCTCCTTCGCGGATCAAGCTGAAGCGGTTTGTTCAACTTCAAACAGCGAGTCCAAGTTCAAGGAGTGCAATGCTGCTGATGGATCCGGAGCATACGGGAGTGCTCTTGATGGAACTGTGCCTGCCTCGGTGCAGCAGTCAGGAGGAGCGAAGTCTGGCTCCAAGAATAAAGGCGACGATGATTTTTCATACCAGGATATCTTAGATGCGCTACAGGATGGCAAAACATCAGTTGGCAAACGAATGAGTAACGCATGACTTACATTTTTGCCTTCTCCTTGGGCCTGTCTGCTCTGAATAACAATTGTTTTGATGGGTATCTTATTTCATTAATCTACTTGGCAGGATGCCAAGATTGCTGTTTATTGTGTGCACATGGTGCACTGTAGGCTACAGAACCTTTTACTGATGAAAGGGAAAAAAAAACTTTCT]

[+] EMBL AK068773             [CAACGAAACCGAGCCCAACCCACTTTGCCCCGCCTCCACCCTACGGCGCCGGCGGCCATGCAGCGCCGCCGCCACCCCCTCCTCCTCCTCCCCCGCCGCCGCCCGCCGTCCAGAACCCTACTCTCCCGCCTGCTCTCCTCCTCGCCGCCCGCCAGCGGCGGCGGCGGCGGCGGGGGAGGAGGAGGGGTGGCGGTGAAGCAGGTGACGCGGGGGAACCTGGCGGAGGCGCTGGAGGAGCTCCGCGCGCGGGTGCGGGGCGCGGCGTTCGTGGGGATCGACCTGGAGATGAGCGGCGTGACGAGCGCGCCGTGGAGGGACACCCTCGAGCTCGACCGCGCCGACGTCCGCTACCTCAAGCTCCGCGACTCCGCGGAGCGGTTCGCGGCCCTGCAGCTCGGCGTCTGCCCCTTCCGCTGGGACCCCGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAAAATGCGTCCTGCTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAACACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAGGATGGCGTATCAGAGAAGAGAGTAGTTTATACAGACACCAATGAAGACAAGATATCCTTGATGAAAAATGTTCGGGAAGATCTACTAAAAAGCAGGGAAGCAAAAGTCAAATCAGCAGTAGGGATCCGTCATGTCATTGATCTTCTTGCCTCAGAAAGGAAATTGATTGTTGGTCATAGTTGTTTCCTAGATATTGCACAAATCTACAGCAAATTTGTTGGTCCTCTTCCTTCATCCATGGAGGAATTTGCCTTGAGTATCAACAGAATGTTCCCACATATGGCAGATACCAGGCATCTTATGTCTGTTAATGACGCGGTTCAGTATCGTATGAGGCACAAAAGCAAATCACTTTCGTCAGCCTTTTCATTGTTGTGCCCTGCACTTCATGCACCTGATGAGAAGTCATCCACCCTTCCTTCTGTGAGAATTGAAGTCGAGGCAGATGAAACAGTGTTATCTTGCTTCACTTCAGGTGCTAAGCATGAAGCAGGTTATGATGCATTCATGACTGGATGTGTTTTTGTTCAGCTCTGTGCTTATCATGGCATTAAATTTGAGCAACTCTCTCCCCTGGAGGACCTAGCAACAAACATTAATCTGAAGAAACACATCAATCTGCTGCCCCCATGCTGGAACAGTGGAACAGTGCTTGATTTGAGTACTGGCACGGAGAGACCAGATGCAGGTTATAAGCGTAGATATCCTGCTGCCGTGTATGACAACGTCATTCTTATCTGGGGATTCCAGTCTAAGGTGAGACCAAAGGATATAAAGGACTGCATCTGCAAAGTGTTTGGTCGAGCTTCTGTTACATCAGTCTTCCCGATTGATTCCACTGCGGTTCTTGTTCAATTCAGCAAACAAGAGTCTGTAAACGATTTCTTGGATCTGAAGGCTACCTTAGAGAGTGCAGATAGTGCTATTTCAGTCTTGCACCCTTTGTCAACTATACTGGAAGGAGGCAAAACACGAGCGGCAAAATATGATACCTACAGAGATATTTGCCGCTCCTCTGTATCAAAGTTCTCCTTCGCGGATCAAGCTGAAGCGGTTTGTTCAACTTCAAACAGCGAGTCCAAGTTCAAGGAGTGCAATGCTGCTGATGGATCCGGAGCATACGGGAGTGCTCTTGATGGAACTGTGCCTGCCTCGGTGCAGCAGTCAGGAGGAGCGAAGTCTGGCTCCAAGAATAAAGGCGACGATGATTTTTCATACCAGGATATCTTAGATGCGCTACAGGATGGCAAAACATCAGTTGGCAAACGAATGAGTAACGCATGACTTACATTTTTGCCTTCTCCTTGGGCCTGTCTGCTCTGAATAACAATTGTTTTGATGGGTATCTTATTTCATTAATCTACTTGGCAGGATGCCAAGATTGCTGTTTATTGTGTGCACATGGTGCACTGTAGGCTACAGAACCTTTTACTGATGAAAGGGAAAAAAAAACTTTCT]
[+] EMBL CA999959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGCAGATACCAGGCATCTTATGTCTGTTAATGCCTTGGTTCAGTATCGTATGAGGCACAAAAGCAAATCACTTTCGTCAGCCTTTTCATTGTTGTGCCCTGCACTTCATGCACCTGATGAGAAGTCATCCACCCTTCCTTCTGTGAGAATTGAAGTCGAGGCAGATGAAACAGTGTTATCTTGCTTCACTTCAGGTGCTAAGCATGAAGCAGGTTATGATGCATTCATGACTGGATGTGTTTTTGTTCAGCTCTGTGCTTATCATGGCATTAAATTTGAGCAACTCTCTCCCCTGGAGGACCTAGCAACAAACATTAATCTGAAGAAACACATCAATCTGCTGCCCCCATGCTGGAACAGTGGAACAGTGCTTGATTTGAGTACTGGCACGGAGAGACCAGATGCAGGTTATAAGCGTAGATATCCTGCTGCCGTGTATGACAACGTCATTCTTATCTGGGGATTCCAGTCTAAGGTGAGACCAAAGGATATAAAGGACTGCATCTGCAAAGTGTTTGGTCGAGCTTCTGTTACATCAGTCTTCCCGATTGATTCCACTGCGGTTCTTGTTCAATTCAGCAAACAAGAGTCTGTAAACGATTTCTTGGATCTGAAGGCTACCTTAGAGAGTGCAGATAGTGCTATTTCAGTCTTGCACCCTTTGTCAACTATACTGGAAGGAGGCAAAACACGAGCGGCAAAATATGATACCTACAGAGATATTTGCCGCTCCTCTGTATCAAAGTTCTCCTTCGCGGATCAAGCTGAAGCGGTTTGTTCAACTTCAAACAGCGAGTCCAAGTTCAAGGAGTGCAATGCTGCTGATGGATCCGGAGCATAC                                                                                                                                                                                                                                                                                                                                                ]


>consensus_7853#0 CAACGAAACCGAGCCCAACCCACTTTGCCCCGCCTCCACCCTACGGCGCCGGCGGCCATG CAGCGCCGCCGCCACCCCCTCCTCCTCCTCCCCCGCCGCCGCCCGCCGTCCAGAACCCTA CTCTCCCGCCTGCTCTCCTCCTCGCCGCCCGCCAGCGGCGGCGGCGGCGGCGGGGGAGGA GGAGGGGTGGCGGTGAAGCAGGTGACGCGGGGGAACCTGGCGGAGGCGCTGGAGGAGCTC CGCGCGCGGGTGCGGGGCGCGGCGTTCGTGGGGATCGACCTGGAGATGAGCGGCGTGACG AGCGCGCCGTGGAGGGACACCCTCGAGCTCGACCGCGCCGACGTCCGCTACCTCAAGCTC CGCGACTCCGCGGAGCGGTTCGCGGCCCTGCAGCTCGGCGTCTGCCCCTTCCGCTGGGAC CCCGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAG CCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTT GCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAAGAACACAAGAAGAAGAGGCAC TTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGG AGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGA TCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGT CAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAAAATGCGTCCTGCTA TCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAACAC ATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAGGATGGCGTATCAGAGAAGAGAG TAGTTTATACAGACACCAATGAAGACAAGATATCCTTGATGAAAAATGTTCGGGAAGATC TACTAAAAAGCAGGGAAGCAAAAGTCAAATCAGCAGTAGGGATCCGTCATGTCATTGATC TTCTTGCCTCAGAAAGGAAATTGATTGTTGGTCATAGTTGTTTCCTAGATATTGCACAAA TCTACAGCAAATTTGTTGGTCCTCTTCCTTCATCCATGGAGGAATTTGCCTTGAGTATCA ACAGAATGTTCCCACATATGGCAGATACCAGGCATCTTATGTCTGTTAATGACGCGGTTC AGTATCGTATGAGGCACAAAAGCAAATCACTTTCGTCAGCCTTTTCATTGTTGTGCCCTG CACTTCATGCACCTGATGAGAAGTCATCCACCCTTCCTTCTGTGAGAATTGAAGTCGAGG CAGATGAAACAGTGTTATCTTGCTTCACTTCAGGTGCTAAGCATGAAGCAGGTTATGATG CATTCATGACTGGATGTGTTTTTGTTCAGCTCTGTGCTTATCATGGCATTAAATTTGAGC AACTCTCTCCCCTGGAGGACCTAGCAACAAACATTAATCTGAAGAAACACATCAATCTGC TGCCCCCATGCTGGAACAGTGGAACAGTGCTTGATTTGAGTACTGGCACGGAGAGACCAG ATGCAGGTTATAAGCGTAGATATCCTGCTGCCGTGTATGACAACGTCATTCTTATCTGGG GATTCCAGTCTAAGGTGAGACCAAAGGATATAAAGGACTGCATCTGCAAAGTGTTTGGTC GAGCTTCTGTTACATCAGTCTTCCCGATTGATTCCACTGCGGTTCTTGTTCAATTCAGCA AACAAGAGTCTGTAAACGATTTCTTGGATCTGAAGGCTACCTTAGAGAGTGCAGATAGTG CTATTTCAGTCTTGCACCCTTTGTCAACTATACTGGAAGGAGGCAAAACACGAGCGGCAA AATATGATACCTACAGAGATATTTGCCGCTCCTCTGTATCAAAGTTCTCCTTCGCGGATC AAGCTGAAGCGGTTTGTTCAACTTCAAACAGCGAGTCCAAGTTCAAGGAGTGCAATGCTG CTGATGGATCCGGAGCATACGGGAGTGCTCTTGATGGAACTGTGCCTGCCTCGGTGCAGC AGTCAGGAGGAGCGAAGTCTGGCTCCAAGAATAAAGGCGACGATGATTTTTCATACCAGG ATATCTTAGATGCGCTACAGGATGGCAAAACATCAGTTGGCAAACGAATGAGTAACGCAT GACTTACATTTTTGCCTTCTCCTTGGGCCTGTCTGCTCTGAATAACAATTGTTTTGATGG GTATCTTATTTCATTAATCTACTTGGCAGGATGCCAAGATTGCTGTTTATTGTGTGCACA TGGTGCACTGTAGGCTACAGAACCTTTTACTGATGAAAGGGAAAAAAAAACTTTCT



consensusID : consensus_7853#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 675
fasta sequence
                              [CCCGGGCTGTTTGAATTCGGCACGAGGGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTT-ATCACATGCTTCCGTGAAGGATTGTCCTTGGTCACAGATTAATCACTTTTTTGGGTTTAATTAATGGGCTAGTACATCTGAACCATGCATTCAAAGTGGAGCATCTCTTTATTTACAATATTTGGTTAATCTCAGGAATATATTATTTATCCAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTC-A-AATGCGTCCTGCTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAACACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAG]

[+] EMBL CF305950             [CCCGGGCTGTTTGAATTCGGCACGAGGGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAAGGATTGTCCTTGGTCACAGATTATTCACTTTTTTGGGTTTAATTAATGGGCTAGTACATCTGAACCATGCATTCAAAGTGGAGCATCTCTTTATTTACAATATTTGGTTAATCTCAGGAATATATTATTTATCCAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAA AATGCGTCCTGCTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAACACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAG]
[+] EMBL CF306593             [                      CGAGGGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTT ATCTCATGCTTCCGTGAAGGATTGTCCTTGGTCACAGATTAATCACTTTTTTGGGTTTAATTAATGGGCTAGTACATCTGAACCATGCATTCAAAGTGGAGCATCTCTTTATTTACAATATTTGGTTAATCTCAGGAATATATTATTTATCCAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTC A AATGCGTCCTGCTATCAT                                                                                              ]
[+] EMBL CF306032             [                            CCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTT TTCACATGCTTCCGTGAAGGATTGTCCTTGGTCACAGATT ATCTTTTTTTTGGGTTTAATTAATGGGCTAGTACATCTGAACCATGCATTCAAAGTGGAGCATCTCTTTATTTACAATATTTGGTTAATCTCAGGAATATATTATTTATCCAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCGAGGATGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCANATTCGCAGACCAGTTCCAGACTGTTTTCTTC ANAATGCGTCCTGCTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAA                                            ]


>consensus_7853#1 CCCGGGCTGTTTGAATTCGGCACGAGGGCCAAGTCCGCCTTCGTCGCCCACCCGCATAAC TTCTTTATCTTTTCTCGGAATGAGCCCCTGAATGATTGTTCAACACATGAATTTCTGTGT CAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTTATCACATGCTTCCGTG AAGGATTGTCCTTGGTCACAGATTAATCACTTTTTTGGGTTTAATTAATGGGCTAGTACA TCTGAACCATGCATTCAAAGTGGAGCATCTCTTTATTTACAATATTTGGTTAATCTCAGG AATATATTATTTATCCAGAACACAAGAAGAAGAGGCACTTCAGAAATTATATACATTGCA TAATAATGAAACATCTGCATATCCAAACACTTCCGAGGAGGAAGAAGATGCGCCATTAAA GAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGAAGATCAAATTCAATGAGTGGCGCAA TTCAATAGTCAGCAATCAAAGAGTCGATGACCATAGGTCAGAAAACTTCAAATTCGCAGA CCAGTTCCAGACTGTTTTCTTCAAATGCGTCCTGCTATCATGCTTAATGGATTCACGTCA CATCAGTTAAAGTTAATCCGACAGATTTTAAGAACACATTTTAGGGACCTTGTGTATGTG TGTACATTTTTGGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7853#0      CAACGAAACCGAGCCCAACCCACTTTGCCCCGCCTCCACCCTACGGCGCCGGCGGCCATG 60
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CAGCGCCGCCGCCACCCCCTCCTCCTCCTCCCCCGCCGCCGCCCGCCGTCCAGAACCCTA 120
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CTCTCCCGCCTGCTCTCCTCCTCGCCGCCCGCCAGCGGCGGCGGCGGCGGCGGGGGAGGA 180
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GGAGGGGTGGCGGTGAAGCAGGTGACGCGGGGGAACCTGGCGGAGGCGCTGGAGGAGCTC 240
consensus_7853#1      ------------------------------------------CCCGGGCTGTTTGAATTC 18
                                                                   * ****   **  **

consensus_7853#0      CGCGCGCGGGTGCGGGGCGCGGCGTTCGTGGGGATCGACCTGGAGATGAGCGGCGTGACG 300
consensus_7853#1      GGCACGAGGGCCAAGTCCGCC---TTCGTCG---CCCACCCGCATA------ACTTCTTT 66
                       ** ** ***    *  ***    ***** *    * *** * * *       * *    

consensus_7853#0      AGCGCGCCGTGGAGGGACACCCTCGAGCTCGACCGCGCCGACGTCCGCTACCTCAAGCTC 360
consensus_7853#1      ATCTTTTCTCGGAATGAGCCCCTGAA---TGATTG--------TTCAACACATGAATTTC 115
                      * *    *  ***  **  ****  *    **  *        * *   ** * **  **

consensus_7853#0      CGCGACTCCGCGGAGCGGTTCGCGGCCCTGCAGCTCGGC-GTCTGCCCCTTCCGCTGGGA 419
consensus_7853#1      TGTGTCAGACCACATCGATTGACTTCCTTGCAAAGTACCAGTTTGATTTATCACATGCTT 175
                       * * *    *  * ** **  *  ** ****      * ** **     **   **   

consensus_7853#0      CCCCGCCAAGTCCGCCTTCGTCGCCCACCCGCATAACTTCTTTATCTTTTCTCGGAATGA 479
consensus_7853#1      CCGTGAAGGATTGTCCTTGGTCACAGATTA--ATCACTTTTTTGGGTTTAATT--AATGG 231
                      **  *     *   **** *** *  *     ** **** ***   ***  *   **** 

consensus_7853#0      GCCCCTGAATGATTGTTCAACACATGAATTTCTGTGTCAGACCACATCGATTGACTTCCT 539
consensus_7853#1      GCTAGTACAT-----CTGAAC-CATGCATT-------CAAAGTGGAGC-ATCTCTTTATT 277
                      **   *  **      * *** **** ***       ** *    * * **    **  *

consensus_7853#0      TGCAAAGTACCAGTTTGATTTCAACA-CATGCT-TCCGTGAAGAACACAAGAAGAAGAGG 597
consensus_7853#1      TACAA--TATTTGGTTAATCTCAGGAATATATTATTTATCCAGAACACAAGAAGAAGAGG 335
                      * ***  **   * ** ** ***  *  **  * *   *  *******************

consensus_7853#0      CACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCG 657
consensus_7853#1      CACTTCAGAAATTATATACATTGCATAATAATGAAACATCTGCATATCCAAACACTTCCG 395
                      ************************************************************

consensus_7853#0      AGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGA 717
consensus_7853#1      AGGAGGAAGAAGATGCGCCATTAAAGAGTGCTGCGGATGTTCTTTTCACAGAAAGAATGA 455
                      ************************************************************

consensus_7853#0      AGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATA 777
consensus_7853#1      AGATCAAATTCAATGAGTGGCGCAATTCAATAGTCAGCAATCAAAGAGTCGATGACCATA 515
                      ************************************************************

consensus_7853#0      GGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAAAATGCGTCCTG 837
consensus_7853#1      GGTCAGAAAACTTCAAATTCGCAGACCAGTTCCAGACTGTTTTCTTCAAA-TGCGTCCTG 574
                      ************************************************** *********

consensus_7853#0      CTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAA 897
consensus_7853#1      CTATCATGCTTAATGGATTCACGTCACATCAGTTAAAGTTAATCCGACAGATTTTAAGAA 634
                      ************************************************************

consensus_7853#0      CACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAGGATGGCGTATCAGAGAAGA 957
consensus_7853#1      CACATTTTAGGGACCTTGTGTATGTGTGTACATTTTTGGAG------------------- 675
                      *****************************************                   

consensus_7853#0      GAGTAGTTTATACAGACACCAATGAAGACAAGATATCCTTGATGAAAAATGTTCGGGAAG 1017
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      ATCTACTAAAAAGCAGGGAAGCAAAAGTCAAATCAGCAGTAGGGATCCGTCATGTCATTG 1077
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      ATCTTCTTGCCTCAGAAAGGAAATTGATTGTTGGTCATAGTTGTTTCCTAGATATTGCAC 1137
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      AAATCTACAGCAAATTTGTTGGTCCTCTTCCTTCATCCATGGAGGAATTTGCCTTGAGTA 1197
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      TCAACAGAATGTTCCCACATATGGCAGATACCAGGCATCTTATGTCTGTTAATGACGCGG 1257
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      TTCAGTATCGTATGAGGCACAAAAGCAAATCACTTTCGTCAGCCTTTTCATTGTTGTGCC 1317
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CTGCACTTCATGCACCTGATGAGAAGTCATCCACCCTTCCTTCTGTGAGAATTGAAGTCG 1377
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      AGGCAGATGAAACAGTGTTATCTTGCTTCACTTCAGGTGCTAAGCATGAAGCAGGTTATG 1437
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      ATGCATTCATGACTGGATGTGTTTTTGTTCAGCTCTGTGCTTATCATGGCATTAAATTTG 1497
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      AGCAACTCTCTCCCCTGGAGGACCTAGCAACAAACATTAATCTGAAGAAACACATCAATC 1557
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      TGCTGCCCCCATGCTGGAACAGTGGAACAGTGCTTGATTTGAGTACTGGCACGGAGAGAC 1617
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CAGATGCAGGTTATAAGCGTAGATATCCTGCTGCCGTGTATGACAACGTCATTCTTATCT 1677
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GGGGATTCCAGTCTAAGGTGAGACCAAAGGATATAAAGGACTGCATCTGCAAAGTGTTTG 1737
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GTCGAGCTTCTGTTACATCAGTCTTCCCGATTGATTCCACTGCGGTTCTTGTTCAATTCA 1797
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GCAAACAAGAGTCTGTAAACGATTTCTTGGATCTGAAGGCTACCTTAGAGAGTGCAGATA 1857
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GTGCTATTTCAGTCTTGCACCCTTTGTCAACTATACTGGAAGGAGGCAAAACACGAGCGG 1917
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CAAAATATGATACCTACAGAGATATTTGCCGCTCCTCTGTATCAAAGTTCTCCTTCGCGG 1977
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      ATCAAGCTGAAGCGGTTTGTTCAACTTCAAACAGCGAGTCCAAGTTCAAGGAGTGCAATG 2037
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CTGCTGATGGATCCGGAGCATACGGGAGTGCTCTTGATGGAACTGTGCCTGCCTCGGTGC 2097
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      AGCAGTCAGGAGGAGCGAAGTCTGGCTCCAAGAATAAAGGCGACGATGATTTTTCATACC 2157
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      AGGATATCTTAGATGCGCTACAGGATGGCAAAACATCAGTTGGCAAACGAATGAGTAACG 2217
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      CATGACTTACATTTTTGCCTTCTCCTTGGGCCTGTCTGCTCTGAATAACAATTGTTTTGA 2277
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      TGGGTATCTTATTTCATTAATCTACTTGGCAGGATGCCAAGATTGCTGTTTATTGTGTGC 2337
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      ACATGGTGCACTGTAGGCTACAGAACCTTTTACTGATGAAAGGGAAAAAAAAACTTTCT 2396
consensus_7853#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)