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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1921 fasta sequence
[TGAAGTAGTTGCTTCTGCGGTAGTTGGCGAGGCTGTGAGCAGGGTCTCCACCTTCTTCGTCGACAAGCATAAACGGAAACTAAGTGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAGAATGGAGGCCGCTCTGGAGATGTCCGGAAAGTGGCCGCCGGTCACAGATGCCTCGCTGCTGCGTTGGAGGAAGAAGCTGAAGTGCGCCTCCGAAGAGTGCAGCCAAGTCATGAACAGATGCAAGCGTCGCGCCATGGAAGACGATGAGATGGAGCAGCAGATCAGGCGATGCTCTTTCCCCAGACGGATCGCCCATGAGACAAGATCATTCTTCTCCTCTTTCTCCGGCGACAAGAATGTTGATAGCCTAATCACAACCTCGACCATTCAGAGGTTTGAAAGGTTTGCTGATGGCGCCGGTGAGTTCCTGAGATTCTTGCAGTTCGGCAGCATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACAGGTCCCCTTCTTGCCGGCAAAGCTCTGCAGTTTGAAAATCCTCCTGGAATAAGTGGGTACTACCTAGCGGCACGGCCACTACGATTTGCAGAGCGAGGAGTAGTAGCCTGTGTGTTTCTTCAGTACAAGAACCATGAGAGGCCAGAGGAAAACTTCCTCCTCGGAATTTTGATACGGGTGACAGCAAGCACGAATGTGGTCGGGATTATGGCCAGGTGCTCGGAGAAGCTTACCTCCAATTTCAAGCCTGTTACTGAAGCTGTGAGGCAAGAGCTCGCTCAGTTCCACCAGCGAGGCTTCTACTGCTTCCCGTTTGTTGCTTCTACTGATCCAGAGTACTCGAGAATCCACCAATCCGAAACTCACCGTGCTCGCCCAAACCCGGCATGCTGCGAAGAAGAACACGAGCACCATGGTCCCCGCAGAAGCAGTGACATGGTTGAGCCGTTAGGTGCATTCCCGGAGCCGGTGATCAAATTGGTCGTGCAACGCCATGTCTCTGCTACACGACACAAGAGAACATCGTCTTCTTCATCATATTCATGTTCATGTGGTCATGCCAACATGGGTTGCTCGGGGCCGACTCTGCTGCAGGTGACGGCCGTCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGTCCGGAGCCAAGAGCGTCGCCGTCGTGGCGATCGACGGGAGGGAGGAGCAAGCGGTGCGCACTAACGTTGGATGGCGTGAGATGGAGGAGCTGCTGCCGAACGCCGTCGATCGCCTGTGCCACGAGGCTGCGGCGCATGAGGTGTTCTGGAGATCCGGCCATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGTGTAAAGGTAGACGACGGTGGCCTCAAGCCCTGAATGAGTAACGTTTTTGCAACGACATGACCTTGAGCTGGAGAGCCAAGCAGCTGTGATCTCTGAATTTCTAGAGTTGTGGGTTCAGGGTAGTCCTATCCTGATGCAATTCTCAGTGGTGGACTGGATTCAGGCCCTATTTGGCTTTTTCTCGAACGCGCAAAAGGATTGCACGTTAATATATTAGAAGATAAGAATATTCGATACACAACGCATTAAGCCAGACCGACTTATGCCAAGAGAGGAGGGAGGCCCTACTTGGTGGAGATTCTGAAAAGAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAATTTTAGTGTAAAATTTGGTACATCATAGTACCTAGATACCAAGAGGTACCAAATTTATAATAGAAAAAATGGTACCTCATAGTACCTACTCAAGAACCATAAAATTGCTCTGGTATGTAAATATGAGCTCAACATGGTGTTGAAGCTTTGATGTGTAATCGGTCATTTTGTCTGAATTTTGCATGCCTCACCCTGTTTCCTT]
[+] EMBL AK072846 [TGAAGTAGTTGCTTCTGCGGTAGTTGGCGAGGCTGTGAGCAGGGTCTCCACCTTCTTCGTCGACAAGCATAAACGGAAACTAAGTGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAGAATGGAGGCCGCTCTGGAGATGTCCGGAAAGTGGCCGCCGGTCACAGATGCCTCGCTGCTGCGTTGGAGGAAGAAGCTGAAGTGCGCCTCCGAAGAGTGCAGCCAAGTCATGAACAGATGCAAGCGTCGCGCCATGGAAGACGATGAGATGGAGCAGCAGATCAGGCGATGCTCTTTCCCCAGACGGATCGCCCATGAGACAAGATCATTCTTCTCCTCTTTCTCCGGCGACAAGAATGTTGATAGCCTAATCACAACCTCGACCATTCAGAGGTTTGAAAGGTTTGCTGATGGCGCCGGTGAGTTCCTGAGATTCTTGCAGTTCGGCAGCATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACAGGTCCCCTTCTTGCCGGCAAAGCTCTGCAGTTTGAAAATCCTCCTGGAATAAGTGGGTACTACCTAGCGGCACGGCCACTACGATTTGCAGAGCGAGGAGTAGTAGCCTGTGTGTTTCTTCAGTACAAGAACCATGAGAGGCCAGAGGAAAACTTCCTCCTCGGAATTTTGATACGGGTGACAGCAAGCACGAATGTGGTCGGGATTATGGCCAGGTGCTCGGAGAAGCTTACCTCCAATTTCAAGCCTGTTACTGAAGCTGTGAGGCAAGAGCTCGCTCAGTTCCACCAGCGAGGCTTCTACTGCTTCCCGTTTGTTGCTTCTACTGATCCAGAGTACTCGAGAATCCACCAATCCGAAACTCACCGTGCTCGCCCAAACCCGGCATGCTGCGAAGAAGAACACGAGCACCATGGTCCCCGCAGAAGCAGTGACATGGTTGAGCCGTTAGGTGCATTCCCGGAGCCGGTGATCAAATTGGTCGTGCAACGCCATGTCTCTGCTACACGACACAAGAGAACATCGTCTTCTTCATCATATTCATGTTCATGTGGTCATGCCAACATGGGTTGCTCGGGGCCGACTCTGCTGCAGGTGACGGCCGTCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGTCCGGAGCCAAGAGCGTCGCCGTCGTGGCGATCGACGGGAGGGAGGAGCAAGCGGTGCGCACTAACGTTGGATGGCGTGAGATGGAGGAGCTGCTGCCGAACGCCGTCGATCGCCTGTGCCACGAGGCTGCGGCGCATGAGGTGTTCTGGAGATCCGGCCATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGTGTAAAGGTAGACGACGGTGGCCTCAAGCCCTGAATGAGTAACGTTTTTGCAACGACATGACCTTGAGCTGGAGAGCCAAGCAGCTGTGATCTCTGAATTTCTAGAGTTGTGGGTTCAGGGTAGTCCTATCCTGATGCAATTCTCAGTGGTGGACTGGATTCAGGCCCTATTTGGCTTTTTCTCGAACGCGCAAAAGGATTGCACGTTAATATATTAGAAGATAAGAATATTCGATACACAACGCATTAAGCCAGACCGACTTATGCCAAGAGAGGAGGGAGGCCCTACTTGGTGGAGATTCTGAAAAGAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAATTTTAGTGTAAAATTTGGTACATCATAGTACCTAGATACCAAGAGGTACCAAATTTATAATAGAAAAAATGGTACCTCATAGTACCTACTCAAGAACCATAAAATTGCTCTGGTATGTAAATATGAGCTCAACATGGTGTTGAAGCTTTGATGTGTAATCGGTCATTTTGTCTGAATTTTGCATGCCTCACCCTGTTTCCTT]
consensusID : consensus_7854#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1876 fasta sequence
[TCATGACTTTTCACTGTCTAATTGGTATCGTGAAGACTCTGAACCATTTCCATCTGGATTCAGGTTTATGCTGTTCACAATCTGCAAAGCTATCAGTTTAAAGCACTAGTTTCAGTTTCAACCAGTTTGGTGTGAGGGCAGCAGTGATCACCAAGAACATCCTGATGTCTGAGGTCATCGCTTCTGCGGTCGTCGGTGAGGCTGTGAGCAGGATCTCCACCTTCCTCATCGACAATCATAACCGCAAATCAAGCGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAAGATGGAGGCCGCCCTGGAAGTGTCCAGCAGGTGGCCTTTGGCCATGGATTCCTCGCTTATGCGTTGGAGGAAGAAGCTGAAGCGAGCCTCCGACGAGTGCAGCCATGTCATGGACAGATGCAAGCGCCGCGCCATGGAAGACGATGAGACGGAGAAGATCAGTCGGTGCTCTTTCCCCAAACGGATCGCCCTTGCCACAAGATCATTCCTCTCCTCCTTCGCCGCTGACGAGAATGTTGATAGCCTGAACTCCACTTCAACCATTCAGAGGTTTGAAAGGTTCGCCGATGGCGCCGGCGAGTTCCTGAAATTCATGGAGTTTGGCAGAATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACTGGGCATCTCCTCGCAGGCAAAGCACTGCAGTATGAAAGTTCTCATGGAAATCAGTACTACCTAATATCAAAGCCAATGAGTTTCGCAGAACGAGGGCAAGAAGCCGGTGTGTTGCTTCGCTACAACAACCATGAGAGGCCAGAGGAGAACTTTGTTCTTGGAATTCTTCTACGTTTGACAGCAAGCACGAACGTGACTGGGATTGTGGCCAGGTGCTTGGATTCACTTCTCCCTAGTTTCAAGCCGGTCGCTGAAGCTGCAAAGCAGGAGCTCACTCAGGTTCACCACCGAGCCTTCTACTGCTTCCCCTTTGTGGATTCTACTGATCCAGAGTACTGGAGCATCCACCATTCCGAGACTCACCGTGCTCGTCCAAATCCGGCATGCTGCCATGGCCAGAGCAGAAGCAGTGACATGGTTGAGCTGTCAGGGACGACGACATTCCCGGAGCAGGTGATCAAACTGTTCGTGCAGCGGCATGTCTCGGCGCGACCATCATCATCTGGTCACGGCGGCGACGGCGAGAGGAGGAGATCCTCTGAAGATTCCGGGCCGCCGCCTCTGCTGCAGGTGACGGCCATCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGCCGTCAGGATCCGAGAGCGCCGCGGTCGTGGCGATCGATGGGAGGGAGGAGCCAGCCGTGCGAACGGACATCGGATTGCGCGAGGTGGATGAGTTTCTTCTGCCTGGCGCCATCGATCGCCTGTGCCACTGCCACGACGTCCATGGCACGGTGGATGGATCGTCGGCGGCGGCGGCGTACGAGGTGTTCTGGAGGTCGGGACATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGAGTAAAGGTAGAGACGACGGTGGCGCTCGCCTCTTCTGCTAATATGTGGTGACTGACATGTGGGCCAGTCAGAGAAACATGGTGCTTGACATGTAGGGTTTCATGTTAGAGGATTTGCTTCCTGTCCACCCACAACATGGAAAATATACAGTGAAAATTTACTGTTGGATCTAAAAATAGATGTATAGTAATATTTTTCCACGTCATAACTGTGAGTAAAATTACAGCTGAATTTGCCATGGTTTTTGCGGTGAGGATGCATTGGTGATGCACGGAAATTTTTACTCGCAATTGTGACATGAACAAATCTCAAGCGTATATATAT]
[+] EMBL AK064136 [TCATGACTTTTCACTGTCTAATTGGTATCGTGAAGACTCTGAACCATTTCCATCTGGATTCAGGTTTATGCTGTTCACAATCTGCAAAGCTATCAGTTTAAAGCACTAGTTTCAGTTTCAACCAGTTTGGTGTGAGGGCAGCAGTGATCACCAAGAACATCCTGATGTCTGAGGTCATCGCTTCTGCGGTCGTCGGTGAGGCTGTGAGCAGGATCTCCACCTTCCTCATCGACAATCATAACCGCAAATCAAGCGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAAGATGGAGGCCGCCCTGGAAGTGTCCAGCAGGTGGCCTTTGGCCATGGATTCCTCGCTTATGCGTTGGAGGAAGAAGCTGAAGCGAGCCTCCGACGAGTGCAGCCATGTCATGGACAGATGCAAGCGCCGCGCCATGGAAGACGATGAGACGGAGAAGATCAGTCGGTGCTCTTTCCCCAAACGGATCGCCCTTGCCACAAGATCATTCCTCTCCTCCTTCGCCGCTGACGAGAATGTTGATAGCCTGAACTCCACTTCAACCATTCAGAGGTTTGAAAGGTTCGCCGATGGCGCCGGCGAGTTCCTGAAATTCATGGAGTTTGGCAGAATAGGCAGCATCAACTACATGCTCGTTGATCCTCTCACTGGGCATCTCCTCGCAGGCAAAGCACTGCAGTATGAAAGTTCTCATGGAAATCAGTACTACCTAATATCAAAGCCAATGAGTTTCGCAGAACGAGGGCAAGAAGCCGGTGTGTTGCTTCGCTACAACAACCATGAGAGGCCAGAGGAGAACTTTGTTCTTGGAATTCTTCTACGTTTGACAGCAAGCACGAACGTGACTGGGATTGTGGCCAGGTGCTTGGATTCACTTCTCCCTAGTTTCAAGCCGGTCGCTGAAGCTGCAAAGCAGGAGCTCACTCAGGTTCACCACCGAGCCTTCTACTGCTTCCCCTTTGTGGATTCTACTGATCCAGAGTACTGGAGCATCCACCATTCCGAGACTCACCGTGCTCGTCCAAATCCGGCATGCTGCCATGGCCAGAGCAGAAGCAGTGACATGGTTGAGCTGTCAGGGACGACGACATTCCCGGAGCAGGTGATCAAACTGTTCGTGCAGCGGCATGTCTCGGCGCGACCATCATCATCTGGTCACGGCGGCGACGGCGAGAGGAGGAGATCCTCTGAAGATTCCGGGCCGCCGCCTCTGCTGCAGGTGACGGCCATCTTCGCGCCGCACGCCTCGCCGGAGGAGCTGCCGCCGTCAGGATCCGAGAGCGCCGCGGTCGTGGCGATCGATGGGAGGGAGGAGCCAGCCGTGCGAACGGACATCGGATTGCGCGAGGTGGATGAGTTTCTTCTGCCTGGCGCCATCGATCGCCTGTGCCACTGCCACGACGTCCATGGCACGGTGGATGGATCGTCGGCGGCGGCGGCGTACGAGGTGTTCTGGAGGTCGGGACATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGGCACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGAGTAAAGGTAGAGACGACGGTGGCGCTCGCCTCTTCTGCTAATATGTGGTGACTGACATGTGGGCCAGTCAGAGAAACATGGTGCTTGACATGTAGGGTTTCATGTTAGAGGATTTGCTTCCTGTCCACCCACAACATGGAAAATATACAGTGAAAATTTACTGTTGGATCTAAAAATAGATGTATAGTAATATTTTTCCACGTCATAACTGTGAGTAAAATTACAGCTGAATTTGCCATGGTTTTTGCGGTGAGGATGCATTGGTGATGCACGGAAATTTTTACTCGCAATTGTGACATGAACAAATCTCAAGCGTATATATAT]
consensusID : consensus_7854#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 824 fasta sequence
[TGACGTTAGGGTAATCGACAAGAACATCCTGATGTCTGAAGTAGTTGCTTCTGCGGTAGTCAGCGAGGCTGTGAGCAGGATCTCCAC-CTTCTTCATCGACAAGCATAAAT-GGAAATTAAGCGAGGAAGATGGCATGGAGAGGCTGGAGATTGCACACATCAGAATGGAGGCAGCCCTCGAGATATCCAGCAGGTGGCCTCGGGTCACAGACGCCTCGCTCCTGCGTTGGAGGAAGAAGCTAAAGCGCACATCCGATGAGTGCAGCCAAATCATGGACAGATGCAAGCGCCGTGCCATGGAAGACGATGAGATGGAACAGGAGGTCAGGCAGTGCGCCTTCCCTAAACGGATCGCCCATGCCACAAAATCGTTCATATCATCTTTCACTGGCCAGAAGAAAGTTGATAGCCTGATCACCACTTCAACCATTCAGAGGTTTGAAAGGTTTGCCAATGGTGCCGGCGAGTTCCTGAGATTCATGGAGTTCGGCAGCATAGGCAGGATAAACTATATGCCTGTTGATCCTCTCACTGGGCACCTTCGTGCAGGCAAAGCTCTACAGTATGAAAATTCTCATGGAAATCAGTACTACCTAACAGCACGGCCAATGCGTTTTGCAGAGCGAGGACAAGAAGCCGGGGTATTGCTTCGGTACCATAACCATGAGAGGCCAGAGGAAAACTTCATTCTTGGAATTATGCTACGCTTGGCAGCAAGCACAAATGTGACTGCAATTGTAGCTAGTTGCTTGGAGTTGCTACCACCCAATTTCAAGTCTGTTGCTGAAGCTGCGAAGCAGGAGCTCACTCAGTTGCACCAGCGAG]
[+] EMBL CB624682 [TGACGTTAGGGTAATCGACAAGAACATCCTGATGTCTGAAGTAGTTGCTTCTGCGGTAGTCAGCGAGGCTGTGAGCAGGATCTCCAC CTTCTTCATCGACAAGCATAAAT GGAAATTAAGCGAGGAAGATGGCATGGAGAGGCTGGAGATTGCACACATCAGAATGGAGGCAGCCCTCGAGATATCCAGCAGGTGGCCTCGGGTCACAGACGCCTCGCTCCTGCGTTGGAGGAAGAAGCTAAAGCGCACATCCGATGAGTGCAGCCAAATCATGGACAGATGCAAGCGCCGTGCCATGGAAGACGATGAGATGGAACAGGAGGTCAGGCAGTGCGCCTTCCCTAAACGGATCGCCCATGCCACAAAATCGTTCATATCATCTTTCACTGGCCAGAAGAAAGTTGATAGCCTGATCACCACTTCAACCATTCAGAGGTTTGAAAGGTTTGCCAATGGTGCCGGCGAGTTCCTGAGATTCATGGAGTTCGGCAGCATAGGCAGGATAAACTATATGCCTGTTGATCCTCTCACTGGGCACCTTCGTGCAGGCAAAGCTCTACAGTATGAAAATTCTCATGGAAATCAGTACTACCTAACAGCACGGCCAATGCGTTTTGCAGAGCGAGGACAAGAAGCCGGGGTATTGCTTCGGTACCATAACCATGAGAGGCCAGAGGAAAACTTCATTCTTGGAATTATGCTACGCTTGGCAGCAAGCACAAATGTGACTGCAATTGTAGCTAGTTGCTTGGAGTTGCTACCACCCAATTTCAAGTCTGTTGCTGAAGCTGCGAAGCAGGAGCTCACTCAGTTGCACCAGCGAG]
[+] EMBL CB624726 [tgagccTAGGGTAATCGACAAGAACATCCTGATGTCTGAAGTAGTTGCTTCTGCGGTAGTCAGCGAGGCTGTGAGCAGGATCTCCACACTTCTTCATCGACAAGCATAAATAGGAAATTAAGCGAGGAAGATGGCATGGAGAGGCTGGAGATTGCACACATCAGAATGGAGGCAGCCCTCGAGATATCCAGCAGGTGGCCTCGGGTCACAGACGCCTCGCTCCTGCGTTGGAGGAAGAAGCTAAAGCGCACATCCGATGAGTGCAGCCAAATCATGGACAGATGCAAGCGCCGTGCCATGGAAGACGATGAGATGGAACACGAGGTCAGGCAGTGCGCCTTCCCTAAACGGATCGCCCATGCCACAAAATCATTCATATCATCTTTCACTGGCCAGAAGAAAGTTGATAGCCTGATCACCACTTCAACCATTCAGAGGTTTGAAAGGTTTGCCAATGGTGCCGGCGAGTTCCTGAGATTCATGGAGTTCGGCAGCATAGGCAGGATAAACTATATGCCTGTTGATCCTCTCACTGGGCACCTTCGTGCAGGCAAAGCTCTACAGTATGAAAATTCTCATGGAAATCAGTACTACCTAACAGCACGGCCAATGCGTTTTGCAGAGCGAGGACAAGAAGCCGGGGTATTGCTTCAGTACCAAAACCATGAGAGGCCAGAGGAAAACTTCATTCTTGGAATTATGCTACGCTTGGCAGCAAGCACAAATGTGACTGCAATTGTAGCTAGTTGCTTGGAGTTGCTACCACCCAAT ]
consensusID : consensus_7854#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[TCAAGGATTATTTGATGCAGTTAGCTTTGAAGTAGACATGTAAAATTAGAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAAATTTAGTATCAAATTTGGTACCTCATGGTATCTTATAGTACCTAGGTACTAAGAGATACCAAATTTACAATAGAAAAAGTGGTACCTCCTCCAGAACCGTAAAATTGCTCGTAAAATTATGGAAGAGAATAACTTTGTAGATTGGGATCGCATGTATGTAGTACATAGCTAGCCAGCTACTAGGCTACTACTGGACAATCAAGAATCAATCATATTAAGGATTTTTGAGTTACCTCATCAGGCAGCATGTTTGATGGGTCGACTCCTCCTCCTTCTATATCTCCCCCATGATTATTCAGCAAAGCTTGCACGCCTTCTTGTATCTCCTTGTCTTGNGAGTCCCCCATCTCTTGCAATGGCTGCGCGCATATTAGNGAAAGATCTGGTCATCAGATCTGGACATGAACTAATTATATGGGTTTCCCCGATCTGNTCGTTTATACACAACATCTTTAGAATCAGGTGCGTAGTTAGCCTAATTACATAGCTTTCTGGTTTATGAATTTTAGCTATTTCTACTTTTGAATAATTAATTCCCTTCTTCTTTACTTGAATCAGATTCTT]
[+] EMBL CA764749 [TCAAGGATTATTTGATGCAGTTAGCTTTGAAGTAGACATGTAAAATTAGAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAAATTTAGTATCAAATTTGGTACCTCATGGTATCTTATAGTACCTAGGTACTAAGAGATACCAAATTTACAATAGAAAAAGTGGTACCTCCTCCAGAACCGTAAAATTGCTCGTAAAATTATGGAAGAGAATAACTTTGTAGATTGGGATCGCATGTATGTAGTACATAGCTAGCCAGCTACTAGGCTACTACTGGACAATCAAGAATCAATCATATTAAGGATTTTTGAGTTACCTCATCAGGCAGCATGTTTGATGGGTCGACTCCTCCTCCTTCTATATCTCCCCCATGATTATTCAGCAAAGCTTGCACGCCTTCTTGTATCTCCTTGTCTTGNGAGTCCCCCATCTCTTGCAATGGCTGCGCGCATATTAGNGAAAGATCTGGTCATCAGATCTGGACATGAACTAATTATATGGGTTTCCCCGATCTGNTCGTTTATACACAACATCTTTAGAATCAGGTGCGTAGTTAGCCTAATTACATAGCTTTCTGGTTTATGAATTTTAGCTATTTCTACTTTTGAATAATTAATTCCCTTCTTCTTTACTTGAATCAGATTCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7854#1 TCATGACTTTTCACTGTCTAATTGGTATCGTGAAGACTCTGAACCATTTCCATCTGGATT 60
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 ------------------------------------------------------------
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 CAGGTTTATGCTGTTCACAATCTGCAAAGCTATCAGTTTAAAGCACTAGTTTCAGTTTCA 120
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 ------------------------------------------------------------
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ACCAGTTTGGTGTGAGGGCAGCAGTGATCACCAAGAACATCCTGATGTCTGAGGTCATCG 180
consensus_7854#2 ------------TGACGTTAG-GGTAATCGACAAGAACATCCTGATGTCTGAAGTAGTTG 47
consensus_7854#0 -------------------------------------------------TGAAGTAGTTG 11
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 CTTCTGCGGTCGTCGGTGAGGCTGTGAGCAGGATCTCCACCTTCCTCATCGACAATCATA 240
consensus_7854#2 CTTCTGCGGTAGTCAGCGAGGCTGTGAGCAGGATCTCCACCTTCTTCATCGACAAGCATA 107
consensus_7854#0 CTTCTGCGGTAGTTGGCGAGGCTGTGAGCAGGGTCTCCACCTTCTTCGTCGACAAGCATA 71
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ACCGCAAATCAAGCGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAAGATGG 300
consensus_7854#2 AATGGAAATTAAGCGAGGAAGATGGCATGGAGAGGCTGGAGATTGCACACATCAGAATGG 167
consensus_7854#0 AACGGAAACTAAGTGAGGAAGATGGCCTGGAGAGGCTGGAGATGGCACACATCAGAATGG 131
consensus_7854#3 -TCAAGGATTATTTGATGCAGTTAGCTTTGAAG---TAGACATG--------TAAAATTA 48
* * ** * ** * ** * ** * ** ** * **
consensus_7854#1 AGGCCGCCCTGGAAGTGTCCAGCAGGTGGCCTTTGGCCATGGATTCCTCGCTTATGCGTT 360
consensus_7854#2 AGGCAGCCCTCGAGATATCCAGCAGGTGGCCTCGGGTCACAGACGCCTCGCTCCTGCGTT 227
consensus_7854#0 AGGCCGCTCTGGAGATGTCCGGAAAGTGGCCGCCGGTCACAGATGCCTCGCTGCTGCGTT 191
consensus_7854#3 GAGCAATTCTACGGTCCTTAAGGAGGTACCATGAGGTACCAAAAATTTAGTATCAAATTT 108
** ** * * * ** * ** * * * **
consensus_7854#1 GGAG----GAAGAAGCTGA-AGCGAGCCTCCGACGAGTGCAGCCATGTCATGGACAGATG 415
consensus_7854#2 GGAG----GAAGAAGCTAA-AGCGCACATCCGATGAGTGCAGCCAAATCATGGACAGATG 282
consensus_7854#0 GGAG----GAAGAAGCTGA-AGTGCGCCTCCGAAGAGTGCAGCCAAGTCATGAACAGATG 246
consensus_7854#3 GGTACCTCATGGTATCTTATAGTACCTAGGTACTAAGAGATACCAAATTTACAATAGAAA 168
** * * ** * ** ** * *** * * ***
consensus_7854#1 CAAGCGCCGCGCCATGGAAGACGATGAGACGGA---GAAGATCAGTCGGTGCTCTTTCCC 472
consensus_7854#2 CAAGCGCCGTGCCATGGAAGACGATGAGATGGAACAGGAGGTCAGGCAGTGCGCCTTCCC 342
consensus_7854#0 CAAGCGTCGCGCCATGGAAGACGATGAGATGGAGCAGCAGATCAGGCGATGCTCTTTCCC 306
consensus_7854#3 -AAGTGGTACCTCCTCCAGAACCGTAAAATTGCTCGTAAAATTATGGAAGAGAATAACTT 227
*** * * * * ** * * * * * * * *
consensus_7854#1 CAAACGGATCGCCCTTGCCACAAGATCATTCCTCTCCTCCTTCGCCGCTGACGAGAATGT 532
consensus_7854#2 TAAACGGATCGCCCATGCCACAAAATCGTTCATATCATCTTTCACTGGCCAGAAGAAAGT 402
consensus_7854#0 CAGACGGATCGCCCATGAGACAAGATCATTCTTCTCCTCTTTCTCCGGCGACAAGAATGT 366
consensus_7854#3 T--GTAGATTG-----GGATCGCATGTATGTAGTACATAGCTAGCCAGCTACTAGGCTAC 280
*** * * * * * * * * * **
consensus_7854#1 TGATAGCCTGAACTCCACTTCAACCATTCAGAGGTTTGAAAGGTTCGCCGATGGCGCCGG 592
consensus_7854#2 TGATAGCCTGATCACCACTTCAACCATTCAGAGGTTTGAAAGGTTTGCCAATGGTGCCGG 462
consensus_7854#0 TGATAGCCTAATCACAACCTCGACCATTCAGAGGTTTGAAAGGTTTGCTGATGGCGCCGG 426
consensus_7854#3 TACTGGAC-AATCAAGAA-TCAATCATATTAAGGATTTTTGAGTTACCTCATCAGGCAGC 338
* * * * * * * ** * *** *** ** *** * ** ** *
consensus_7854#1 CGAGTTCCTGAAA----TTCATGGAGTTTGGCAGAATAGGCAGCATCAACTAC--ATGCT 646
consensus_7854#2 CGAGTTCCTGAGA----TTCATGGAGTTCGGCAGCATAGGCAGGATAAACTAT--ATGCC 516
consensus_7854#0 TGAGTTCCTGAGA----TTCTTGCAGTTCGGCAGCATAGGCAGCATCAACTAC--ATGCT 480
consensus_7854#3 ATGTTTGATGGGTCGACTCCTCCTCCTTCTATATCTCCCCCATGATTATTCAGCAAAGCT 398
** ** * * ** * ** ** * * * **
consensus_7854#1 CGTTGATCCTCTCACTGGGCATCTCCTCGCAGGCAAAGCACTGCAGTATGAAAGTTCTCA 706
consensus_7854#2 TGTTGATCCTCTCACTGGGCACCTTCGTGCAGGCAAAGCTCTACAGTATGAAAATTCTCA 576
consensus_7854#0 CGTTGATCCTCTCACAGGTCCCCTTCTTGCCGGCAAAGCTCTGCAGTTTGAAAATCCTCC 540
consensus_7854#3 TGCACGCCTTCTTGTATCTCCTTGTCTTGNGAGTC---CCCCATCTCTTGCAATGGCTGC 455
* * *** * * * * * * ** ** **
consensus_7854#1 TGGAA---ATCAGTACTACCTAATATCAAAGCCAATGAGTTTCGCAGAACGAGGGCAAGA 763
consensus_7854#2 TGGAA---ATCAGTACTACCTAACAGCACGGCCAATGCGTTTTGCAGAGCGAGGACAAGA 633
consensus_7854#0 TGGAATAAGTGGGTACTACCTAGCGGCACGGCCACTACGATTTGCAGAGCGAGGAGTAGT 600
consensus_7854#3 GCGCA--------TATTAGNGAAAGATCTGGTCATCA-GATCTGGA---CATGAACTAAT 503
* * ** ** * * ** * * * * * * *
consensus_7854#1 AGCCGGTGTGTTGCTTCGCTACAACAACCATGAGAGGCCAGAGGAGAACTTTGTTCTTGG 823
consensus_7854#2 AGCCGGGGTATTGCTTCGGTACCATAACCATGAGAGGCCAGAGGAAAACTTCATTCTTGG 693
consensus_7854#0 AGCCTGTGTGTTTCTTCAGTACAAGAACCATGAGAGGCCAGAGGAAAACTTCCTCCTCGG 660
consensus_7854#3 --TATATGGGTTTCCCCGAT-------CTGNTCGTTTATACACAACATCTTTAGAATCAG 554
* ** * * * * * * * * * *** * *
consensus_7854#1 AATTCTTCTACGTTTGACAGCAAGCACGAACGTGACTGGGATTGTGGCCAGGTGC---TT 880
consensus_7854#2 AATTATGCTACGCTTGGCAGCAAGCACAAATGTGACTGCAATTGTAGCTAGTTGC---TT 750
consensus_7854#0 AATTTTGATACGGGTGACAGCAAGCACGAATGTGGTCGGGATTATGGCCAGGTGC---TC 717
consensus_7854#3 GTGCGTAGTTAGCCTAATTACATAGCTTTCTGGTTTATGAATTTTAGCTATTTCTACTTT 614
* * * * ** * *** * ** * * *
consensus_7854#1 GGATTCACTTCTCCCTAGTTTCAAGCCGGTCGCTGAAGCTGCAAAGCAGGAGCTCACTCA 940
consensus_7854#2 GGAGTTGCTACCACCCAATTTCAAGTCTGTTGCTGAAGCTGCGAAGCAGGAGCTCACTCA 810
consensus_7854#0 GGAGAAGCTTACCTCCAATTTCAAGCCTGTTACTGAAGCTGTGAGGCAAGAGCTCGCTCA 777
consensus_7854#3 TGAATAATTAATTCCCTTCTTCTTTACTTGAATCAGATTCTT------------------ 656
** * * *** * *
consensus_7854#1 GGTTCACCACCGAGCCTTCTACTGCTTCCCCTTTGTGGATTCTACTGATCCAGAGTACTG 1000
consensus_7854#2 GTTGCACCAGCGAG---------------------------------------------- 824
consensus_7854#0 GTTCCACCAGCGAGGCTTCTACTGCTTCCCGTTTGTTGCTTCTACTGATCCAGAGTACTC 837
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GAGCATCCACCATTCCGAGACTCACCGTGCTCGTCCAAATCCGGCATGCTGC-------- 1052
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GAGAATCCACCAATCCGAAACTCACCGTGCTCGCCCAAACCCGGCATGCTGCGAAGAAGA 897
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ----------CATGGCCAGAGCAGAAGCAGTGACATGGTTGAGCTGTCAGGGACGACGAC 1102
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 ACACGAGCACCATGGTCCCCGCAGAAGCAGTGACATGGTTGAGCCGTTAGGTGC------ 951
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ATTCCCGGAGCAGGTGATCAAACTGTTCGTGCAGCGGCATGTCTCGGCGCGACCAT---- 1158
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 ATTCCCGGAGCCGGTGATCAAATTGGTCGTGCAACGCCATGTCTCTGCTACACGACACAA 1011
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 -----CATCATCTGGTCACGGCGGCGACGGCGAGAGGAGGAGATCCTCTGAAGATTCCGG 1213
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GAGAACATCGTCTTCTTCATCATATTCATGTTCATGTGGTCATGCCAACATGGGTTGCTC 1071
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GCCGCCGCCTCTGCTGCAGGTGACGGCCATCTTCGCGCCGCACGCCTCGCCGGAGGAGCT 1273
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GGGGCCGACTCTGCTGCAGGTGACGGCCGTCTTCGCGCCGCACGCCTCGCCGGAGGAGCT 1131
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GCCGCCGTCAGGATCCGAGAGCGCCGCGGTCGTGGCGATCGATGGGAGGGAGGAGCCAGC 1333
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GCCG---TCCGGAGCCAAGAGCGTCGCCGTCGTGGCGATCGACGGGAGGGAGGAGCAAGC 1188
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 CGTGCGAACGGACATCGGATTGCGCGAGGTGGATGAGTTTCTTCTGCCTGGCGCCATCGA 1393
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GGTGCGCACTAACGTTGGATGGCGTGAGATGGAGGAG---CTGCTGCCGAACGCCGTCGA 1245
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 TCGCCTGTGCCACTGCCACGACGTCCATGGCACGGTGGATGGATCGTCGGCGGCGGCGGC 1453
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 TCGCCTGTGCCAC------------------------------------GAGGCTGCGGC 1269
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GTACGAGGTGTTCTGGAGGTCGGGACATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGG 1513
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GCATGAGGTGTTCTGGAGATCCGGCCATGGCGTCGCCTACCTGTGCGTGGAGAAGATGGG 1329
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 CACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGAGTAAAGGTAGAGACGACGGTG 1573
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 CACGGAGATGGCAAGGTGCAGGCCGACTCAATGGCGGGTGTAAAGGTAGA--CGACGGTG 1387
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GCGCTCGCCTCTT--CTGCTAATATGTGGTGACTGACATGTGGGCCAGTCAGAGAAACAT 1631
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GCCTCAAGCCCTGAATGAGTAACGTTTTTGCAACGACATGACCTTGAGCTGGAGAGCCAA 1447
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GGTGCT-TGACATGTAGGGTTTCATGTTAGAGGATTTGCT----TCCTGTCCACCCACAA 1686
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GCAGCTGTGATCTCTGAATTTCTAGAGTTGTGGGTTCAGGGTAGTCCTATCCTGATGCAA 1507
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 CATGGAA-AATATACAGTGAAAATTTACTGTTGGATCTAAAAATAGATGTATAGTAATAT 1745
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 TTCTCAGTGGTGGACTGGATTCAGGCCCTATTTGGCTTTTTCTCGAACGCGCAAAAGGAT 1567
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 TTTTCCACGTCATAACTGTGAGTAAAATTA--CAGCTGAATTTGCCATGGTTTTTGCGGT 1803
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 TGCACGTTAATATATTAGAAGATAAGAATATTCGATACACAACGCATTAAGCCAGACCGA 1627
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 GAGGATGCATTGGTGATGCACGGAAATTTTTACTCGCAATTGTGACATGAACAAATCTCA 1863
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 CTTATGCCAAGAGAGGAGGGAGGCCCTACTTGGTGGAGATTCTGAAAAGAGCAATTCTAC 1687
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 AGCGTATATATAT----------------------------------------------- 1876
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 GGTCCTTAAGGAGGTACCATGAGGTACCAAAATTTTAGTGTAAAATTTGGTACATCATAG 1747
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ------------------------------------------------------------
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 TACCTAGATACCAAGAGGTACCAAATTTATAATAGAAAAAATGGTACCTCATAGTACCTA 1807
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ------------------------------------------------------------
consensus_7854#2 ------------------------------------------------------------
consensus_7854#0 CTCAAGAACCATAAAATTGCTCTGGTATGTAAATATGAGCTCAACATGGTGTTGAAGCTT 1867
consensus_7854#3 ------------------------------------------------------------
consensus_7854#1 ------------------------------------------------------
consensus_7854#2 ------------------------------------------------------
consensus_7854#0 TGATGTGTAATCGGTCATTTTGTCTGAATTTTGCATGCCTCACCCTGTTTCCTT 1921
consensus_7854#3 ------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||