Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7887 cluster # 7887       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7887#0 length = 3167 sequences # 3  
 consensus_7887#1 length = 1584 sequences # 1  
consensus_7887#2 length = 602 sequences # 1  
consensusID : consensus_7887#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3167
fasta sequence 
                              [GCTGTGGTTCTCTGACGAAAATGCCACTCACTTTCCCCACACGCGTTCGTCACTCCAAGCTCGATGTCTCTCCCCCGCCGCTTTGGATCAATCGTCAGCGACTCACCATTCGGCGACTCGGCCATTGACAGCGATAGTCGCACGGGTTCTTGCTTATTTGGATCCGTTCTTCCGGGGAGCGAGCTAACCGGGCGAGCGAGATGCAGCACCAGCAAGGATTTGATACACACAGGCTACACCAGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATGATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTTTCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGAATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGAATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGCTTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCATTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAGCTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTCTTAATTCATGCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAAATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTAAGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCATCAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAAATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCGGACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGGATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCAATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTGCAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTAAGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATGCTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGACAATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCAGAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGTTGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATATAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACGAGCA-GTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGCCAATATTCAGAA--AAGGTGTACCCTCTTTGCATTTGTTACCCTTGTGTATATGGTAATGAATGTGTGGTGAATCTTTAAAGTGAAGCTTATTGCGAATGAGAGTACCC]

[+] EMBL AK122110             [GCTGTGGTTCTCTGACGAAAATGCCACTCACTTTCCCCACACGCGTTCGTCACTCCAAGCTCGATGTCTCTCCCCCGCCGCTTTGGATCAATCGTCAGCGACTCACCATTCGGCGACTCGGCCATTGACAGCGATAGTCGCACGGGTTCTTGCTTATTTGGATCCGTTCTTCCGGGGAGCGAGCTAACCGGGCGAGCGAGATGCAGCACCAGCAAGGATTTGATACACACAGGCTACACCAGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATGATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTTTCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGAATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGAATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGCTTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCATTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAGCTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTCTTAATTCATGCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAAATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTAAGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCATCAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAAATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCGGACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGGATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCAATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTGCAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTAAGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATGCTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGACAATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCAGAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGTTGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATATAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK068932             [                     TGCCACTCACTTTCCCCACACGCGTTCGTCACTCCAAGCTCGATGTCTCTCCCCCGCCGCTTTGGATCAATCGTCAGCGACTCACCATTCGGCGACTCGGCCATTGACAGCGATAGTCGCACGGGTTCTTGCTTATTTGGATCCGTTCTTCCGGGGAGCGAGCTAACCGGGCGAGCGAGATGCAGCACCAGCAAGGATTTGATACACACAGGCTACACCAGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATGATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTTTCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGAATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGAATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGCTTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCATTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAGCTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTCTTAATTCATGCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAAATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTAAGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCATCAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAGCCAGGCACTTGTAGAAATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCGGACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGGATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCAATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTGCAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTAAGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATGCTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGACAATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCAGAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGTTGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACGAGCA GTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGCCAATATTCAGAA  AAGGTGTACCCTCTTTGCATTTGTTACCCTTGTGTATATGGTAATGAATGTGTGGTGAATCTTTAAAGTGAAGCTTATTGCGAATGAGAGTACCC]
[+] EMBL BM419270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGTGTTGGCTAAGCCACAACAAC AAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACGAGCACGTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGCCAATATTCAGAANCCNGGTGTACCCTCTTTGCATTTGTTAaaaaa                                                                ]




>consensus_7887#0
GCTGTGGTTCTCTGACGAAAATGCCACTCACTTTCCCCACACGCGTTCGTCACTCCAAGC
TCGATGTCTCTCCCCCGCCGCTTTGGATCAATCGTCAGCGACTCACCATTCGGCGACTCG
GCCATTGACAGCGATAGTCGCACGGGTTCTTGCTTATTTGGATCCGTTCTTCCGGGGAGC
GAGCTAACCGGGCGAGCGAGATGCAGCACCAGCAAGGATTTGATACACACAGGCTACACC
AGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATG
ATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTT
TCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGA
ATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGA
ATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGC
TTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCA
TTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAG
CTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTCTTAATTCAT
GCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAA
ATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTA
AGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCAT
CAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAA
ATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCG
GACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGG
ATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCA
ATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTG
CAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTA
AGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATG
CTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGAC
AATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCA
GAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGT
TGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGT
TTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGA
AGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGC
TTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATC
ATTTTCTCCCTAGGCAATACCATGGTGTTATACATATAATTGCTGCCTTGGGGTACAACT
GGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGAT
GGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTG
ATGCAGGTGCCGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAA
CACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAG
CAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATC
AAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCG
ATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCG
GGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTC
AGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGC
TTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAAT
TTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAAC
ATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGAT
GGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCG
ATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTC
TCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAAT
ACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAAAAAGTAGAAGTTT
CTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACA
ACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACG
AGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGA
AAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCT
GAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGC
CAATATTCAGAAAAGGTGTACCCTCTTTGCATTTGTTACCCTTGTGTATATGGTAATGAA
TGTGTGGTGAATCTTTAAAGTGAAGCTTATTGCGAATGAGAGTACCC

consensusID : consensus_7887#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1584
fasta sequence 
                              [CAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGTACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAAAAGTAGGACTGAAATGTTCCTTTTTCCAATCACAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACGAGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGCCAATATTCAGAAAAGGTGTACCCT]

[+] EMBL AK059687             [CAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGTACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTCGCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAAAAGTAGGACTGAAATGTTCCTTTTTCCAATCACAGGATGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACAACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACGAGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGCCAATATTCAGAAAAGGTGTACCCT]




>consensus_7887#1
CAATTTTTAAAGTTTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCA
TCTGAAATTATGAAGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTC
ATGGAAGTACTGCTTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAAT
AGTGAAGGGAATCATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCC
TTGGGGTACAACTGGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGT
GATGCAAATGGATGGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTA
GTGCTCCTTCTTGATGCAGGTGCCGCAGCTGGTGTACTGTCAGACCCAACAGCACAAGAT
CCTGCTGCCAAAACACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCG
TATCTTTCAGAAGCAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGG
TCTTCTGGAGATCAAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCA
CAAAGTGGTAGCGATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCT
GTTCAAGCTGCCGGGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAA
CAAGCAGGTCTTCAGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCT
TCACACGGTATGCTTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAG
AAACGCAAAGAATTTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGA
GCTCATCAACAACATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAG
GTCATGCTTAGATGGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATA
GCAATGCCAATCGATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGA
GTGGAAACAGCTCTCAACAAAGCTGTTTCAAGGGTATCATCGATCATCGACAGTCCTGTC
GCGAGACAGCAATACCGAAGGATGCTCAAAATGCACAAACAAAACAAGGATGATGATGAA
AAGTAGGACTGAAATGTTCCTTTTTCCAATCACAGGATGATGATGAAAAAGTAGAAGTTT
CTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAACA
ACAAAGCAATGCACTAGCTGGCCAGTATTGCCATGTCCGACCTTGTTAAATGATCTGACG
AGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGCGATTCACTGTGCAGCGAATCCTGA
AAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTTGCTCT
GAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTCTTGGC
CAATATTCAGAAAAGGTGTACCCT

consensusID : consensus_7887#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 602
fasta sequence 
                              [AGAGCCGAAGATGACATACCAGGGTTTCCGAAACCAAGAGGGAACACGCTCTCTACCGAACTGGTTTCAAAGGGTATTCATCGATCATCGACCAGTCCTTCGCGAGAACAGCTATTCCCGNAGGATGCCTCGAAATGCACAACAACCAAGGATGATGATGAAAAGTAGAAGACTGATAATGGTNCCGTGTGTCNCCATCACACGGATGGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGNCAGTGCAGTCATCACATGTGTTGGCTAAGCCACAACCACAAGCNATGCACCTAGCTGGCCAGTATTGCCATGTCCGACCGTGTGTAAATGATCNGACGACCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGGCGATTCACTGTGGCAGCGAATCCTGAAACCAGAGGATTTATCGATGATCCNGTACCATCACTGGTTCTTCTTCCCTTGCTCTGAAAAAATGTGTTTTACCTTNTGTACATAAGAAAATCATGTGCAAGCTGACTCTTGCCAATATTCAGAAAAGGGGTACCCTCGTGCATTTGTTACCCTTGTGTATATGTAATGAATGTGTGGTGAATCTTTAAA]

[+] EMBL BI806015             [AGAGCCGAAGATGACATACCAGGGTTTCCGAAACCAAGAGGGAACACGCTCTCTACCGAACTGGTTTCAAAGGGTATTCATCGATCATCGACCAGTCCTTCGCGAGAACAGCTATTCCCGNAGGATGCCTCGAAATGCACAACAACCAAGGATGATGATGAAAAGTAGAAGACTGATAATGGTNCCGTGTGTCNCCATCACACGGATGGATGATGAAAAAGTAGAAGTTTCTCCAGCATCTCATGTTTATGNCAGTGCAGTCATCACATGTGTTGGCTAAGCCACAACCACAAGCNATGCACCTAGCTGGCCAGTATTGCCATGTCCGACCGTGTGTAAATGATCNGACGACCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGGCGATTCACTGTGGCAGCGAATCCTGAAACCAGAGGATTTATCGATGATCCNGTACCATCACTGGTTCTTCTTCCCTTGCTCTGAAAAAATGTGTTTTACCTTNTGTACATAAGAAAATCATGTGCAAGCTGACTCTTGCCAATATTCAGAAAAGGGGTACCCTCGTGCATTTGTTACCCTTGTGTATATGTAATGAATGTGTGGTGAATCTTTAAA]




>consensus_7887#2
AGAGCCGAAGATGACATACCAGGGTTTCCGAAACCAAGAGGGAACACGCTCTCTACCGAA
CTGGTTTCAAAGGGTATTCATCGATCATCGACCAGTCCTTCGCGAGAACAGCTATTCCCG
NAGGATGCCTCGAAATGCACAACAACCAAGGATGATGATGAAAAGTAGAAGACTGATAAT
GGTNCCGTGTGTCNCCATCACACGGATGGATGATGAAAAAGTAGAAGTTTCTCCAGCATC
TCATGTTTATGNCAGTGCAGTCATCACATGTGTTGGCTAAGCCACAACCACAAGCNATGC
ACCTAGCTGGCCAGTATTGCCATGTCCGACCGTGTGTAAATGATCNGACGACCAGTTGGC
CTTATGAAGAACAGTAAATCCTTGGGCGATTCACTGTGGCAGCGAATCCTGAAACCAGAG
GATTTATCGATGATCCNGTACCATCACTGGTTCTTCTTCCCTTGCTCTGAAAAAATGTGT
TTTACCTTNTGTACATAAGAAAATCATGTGCAAGCTGACTCTTGCCAATATTCAGAAAAG
GGGTACCCTCGTGCATTTGTTACCCTTGTGTATATGTAATGAATGTGTGGTGAATCTTTA
AA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7887#0      GCTGTGGTTCTCTGACGAAAATGCCACTCACTTTCCCCACACGCGTTCGTCACTCCAAGC 60
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TCGATGTCTCTCCCCCGCCGCTTTGGATCAATCGTCAGCGACTCACCATTCGGCGACTCG 120
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GCCATTGACAGCGATAGTCGCACGGGTTCTTGCTTATTTGGATCCGTTCTTCCGGGGAGC 180
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GAGCTAACCGGGCGAGCGAGATGCAGCACCAGCAAGGATTTGATACACACAGGCTACACC 240
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AGGAAGTAAAATCGCGGTGGTTAAAGCCTAAAGAGGTTCTGCAGATATTGCAGAATCATG 300
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATCGGTTCATCATCACACATAAGACTCCTCATAAGCCACCGAGTGGTGCTTGGTTTCTTT 360
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TCAACCGTAGAGTTCTTCGGTACTTCAGAAATGATGGGTATGAATGGCGAAAAAAGAAGA 420
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATGGGAAGACTATTGCTGAAGCCCATGAGCGCCTTAAGGTTGATAATGTTGATGCACTGA 480
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATTGCTACTATGCACACGCAGACAAAAACTCTACATTTCAGAGGCGTATATATTGGATGC 540
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTGATCCGGCTTATGATCACATAGTTTTTGTCCACTACAGAGATGTTCAAGAGGGCAGCA 600
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTTCAGTATCAGCACTGAATGATTCATCAACATCCAATCAGAATGGCAGTGGTAGCAGAG 660
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CTGAGGCTCAAAGTTCACCCGGATTGACTAGCGAGCTATTTGCCCCATGTCTTAATTCAT 720
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GCAGTCCAGGATCTGCGGAAGAAGTTAGTTCCCAGATTATGGCCATAAACAACGAAACAA 780
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATAGCGTTAGTCAACCTGATTGGGTTCAACATTGTAATCAGGCAGCGCTGCGAAAACTTA 840
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AGGTGCAGCTGAGTCTGGAAGATAGGGAAGATCATGATGTCGATGCCAAAGATATTCCAT 900
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CAAACAGTGAACCTATCACTGTGTATGGGATTCAGAATGAAGAACCAGGCACTTGTAGAA 960
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATCTTGCAGATGTTTTTAGTGGACTGGAGTTCAGCAAAGAAAATCATCCTGAAGAAACCG 1020
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GACTCCCTTTTTCCAGCACTATTGATGTGCTGAAAAATTCAGACACTTGGTTGGAGGAGG 1080
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATCAGATTGAAGCAATTCTGCATTCAGCATCTATGATAGTGACTGAAAACCAATGGTTCA 1140
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATATTCGTGAGGTTTCCCCAGAATGGTCCTATTGTTCTGAAAGTACAAAGGTTATCATTG 1200
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CAGGAGACTTCCTTCGTGATCCCTCTCATGGTTCATGGGCAATAGTATTTGGCGATGTTA 1260
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AGGTACATGCAGAAATTGTTCAGCAAGGTGTCATTCGTTGCCATACTCCATGCCTTGATG 1320
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CTAGAAAAGTGACAATGTACTTGATTGATGAAAATGAGAAAGCCTGCAGTGAAGCACGAC 1380
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AATTCGAATTCCATAATAAGCCTACCAAAAGTGTGGTTTGTGAGAACAGGAAACCCTGCA 1440
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GAGAAGTACATGAATCTGAACTCCATCAGAGGCCTACTGAAAGCAACAATGAGCTATTGT 1500
consensus_7887#1      ------------------------------------------------------------
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TGCTTTTTAACTATGCTCAGTTGCTTTTCGATGGTCATGTTTCTGAGCAATTTTTAAAGT 1560
consensus_7887#1      -----------------------------------------------CAATTTTTAAAGT 13
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGA 1620
consensus_7887#1      TTGGCTTGCCATTCCCAAATCTTGAATGCGGACTCCAAGTTAGCCCATCTGAAATTATGA 73
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGC 1680
consensus_7887#1      AGGGGGCATCTGAGCGGCTGAACCGTGACACCGCAGTAAATTGTGTCATGGAAGTACTGC 133
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATC 1740
consensus_7887#1      TTAACAACAAGTTTGAAGAGTGGCTGTTTTCTAAATATGAACAAAATAGTGAAGGGAATC 193
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATTTTCTCCCTAGGCAATACCATGGTGTTATACATATAATTGCTGCCTTGGGGTACAACT 1800
consensus_7887#1      ATTTTCTCCCTAGGCAATACCATGGTGTTATACATACAATTGCTGCCTTGGGGTACAACT 253
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGAT 1860
consensus_7887#1      GGGCTTTGAAACTTCTGCTTAATTCAGGTGTACTTGTAAACTACCGTGATGCAAATGGAT 313
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTG 1920
consensus_7887#1      GGACTGCTTTACATTGGGCTGCACGATTTGGCAGGGAAGAGACGGTAGTGCTCCTTCTTG 373
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATGCAGGTGCCGCAGCTGGTGCACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAA 1980
consensus_7887#1      ATGCAGGTGCCGCAGCTGGTGTACTGTCAGACCCAACAGCACAAGATCCTGCTGCCAAAA 433
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAG 2040
consensus_7887#1      CACCTGCTTCAGTAGCTTCTGCATATGGTTTCAAGGGCCTTTCTGCGTATCTTTCAGAAG 493
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      CAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATC 2100
consensus_7887#1      CAGAACTAATAGCTCATCTTCATTCTCTCGAATCAAAAGAAAACGGGTCTTCTGGAGATC 553
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCG 2160
consensus_7887#1      AAATATCAAGAGTTGTGGGCAGAATATCAGACACATCTGCCCATGCACAAAGTGGTAGCG 613
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCG 2220
consensus_7887#1      ATGATCAGCTTGCACTGAAGGAATCCCTAGGAGCTATGCGATATGCTGTTCAAGCTGCCG 673
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTC 2280
consensus_7887#1      GGCGCATACAAACTGCCTTCCGTATTTTTTCCTTCAGGAAGAAACAACAAGCAGGTCTTC 733
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      AGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGC 2340
consensus_7887#1      AGAATAGAGGTAACCACATTATATCCATTCGTGAGGTAGGTGCTGCTTCACACGGTATGC 793
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAAT 2400
consensus_7887#1      TTGAGAAAGCCGCGTTATCTATCCAGAAGAACTTCAGGTGCTGGAAGAAACGCAAAGAAT 853
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      TTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAAC 2460
consensus_7887#1      TTCTGAAAATACGCAAAAATGTCATCAAGATACAGGCGCGTGTCAGAGCTCATCAACAAC 913
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGAT 2520
consensus_7887#1      ATAACAAGTACAAGGAGTTACTTCGAAGTGTGGGCATCCTTGAGAAGGTCATGCTTAGAT 973
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      GGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCG 2580
consensus_7887#1      GGTACCGAAAGGGTGTTGGTTTACGAGGATTCCACCCTGGGGCAATAGCAATGCCAATCG 1033
consensus_7887#2      ------------------------------------------------------------
                                                                                  

consensus_7887#0      ATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTC 2640
consensus_7887#1      ATGAAGAGGACGAAGATGACGTAGCCAAGGTTTTCCGGAAGCAAAGAGTGGAAACAGCTC 1093
consensus_7887#2      -----AGAGCCGAAGATGACATA-CCAGGGTTTCC--GAAACCAAGAGGGAACAC-GCTC 51
                              * ********** ** *** ***** *  *** * ***** * * ** ****

consensus_7887#0      TCAACAAAGCTGTTTC--AAGGGTAT-CATCGATCATCGACAGTCCTGTCGCGAGA-CAG 2696
consensus_7887#1      TCAACAAAGCTGTTTC--AAGGGTAT-CATCGATCATCGACAGTCCTGTCGCGAGA-CAG 1149
consensus_7887#2      TCTACCGAACTGGTTTCAAAGGGTATTCATCGATCATCGACCAGTCCTTCGCGAGAACAG 111
                      ** **  * *** **   ******** **************    *  ******** ***

consensus_7887#0      CAATACC-GAAGGATGC-TCAAAATGCACAAACAAAACAAGGATGATGATGAAAA----- 2749
consensus_7887#1      CAATACC-GAAGGATGC-TCAAAATGCACAAACAAAACAAGGATGATGATGAAAAGTAGG 1207
consensus_7887#2      CTATTCCCGNAGGATGCCTCGAAATGCACAAC--AACCAAGGATGATGATGAAAAGTAGA 169
                      * ** ** * ******* ** **********   ** ******************     

consensus_7887#0      --------------------------------------------------AGTAGAAGTT 2759
consensus_7887#1      AC--------TGAAATGTTCCTTTTTCCAATCACAGGATGATGATGAAAAAGTAGAAGTT 1259
consensus_7887#2      AGACTGATAATGGTNCCGTGTGTCNCCATCACACGGATGGATGATGAAAAAGTAGAAGTT 229
                                                                        **********

consensus_7887#0      TCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAAC 2819
consensus_7887#1      TCTCCAGCATCTCATGTTTATGGCAGTGGCAGTCATCACATGTGTTGGCTAAGCCACAAC 1319
consensus_7887#2      TCTCCAGCATCTCATGTTTATGNCAGTG-CAGTCATCACATGTGTTGGCTAAGCCACAAC 288
                      ********************** ***** *******************************

consensus_7887#0      AACAAAGCAATGCAC-TAGCTGGCCAGTATTGCCATGTCCGACCTTGT-TAAATGATCTG 2877
consensus_7887#1      AACAAAGCAATGCAC-TAGCTGGCCAGTATTGCCATGTCCGACCTTGT-TAAATGATCTG 1377
consensus_7887#2      CACAA-GCNATGCACCTAGCTGGCCAGTATTGCCATGTCCGACCGTGTGTAAATGATCNG 347
                       **** ** ****** **************************** *** ********* *

consensus_7887#0      ACGAGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGG-CGATTCACTGTG-CAGCGAAT 2935
consensus_7887#1      ACGAGCAGTTGGCCTTATGAAGAACAGTAAATCCTTGG-CGATTCACTGTG-CAGCGAAT 1435
consensus_7887#2      ACGACCAGTTGGCCTTATGAAGAACAGTAAATCCTTGGGCGATTCACTGTGGCAGCGAAT 407
                      **** ********************************* ************ ********

consensus_7887#0      CCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTT 2995
consensus_7887#1      CCTGAAAAACCAGAGGAATTTATCGATGATCCAGTACCATCACTGGTTCTTCTTGCCCTT 1495
consensus_7887#2      CCTGAA--ACCAGAGGA-TTTATCGATGATCCNGTACCATCACTGGTTCTTCTT-CCCTT 463
                      ******  ********* ************** ********************* *****

consensus_7887#0      GCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTC 3055
consensus_7887#1      GCTCTGAAAAAATGTGTTTTACCTTTTGTACATAAGAAAAATCATGTGCAAAGCTGACTC 1555
consensus_7887#2      GCTCTGAAAAAATGTGTTTTACCTTNTGTACATAAGAAAA-TCATGTGCAA-GCTGACTC 521
                      ************************* ************** ********** ********

consensus_7887#0      TTGGCCAATATTCAGAAAAGGTGTACCCTCTTTGCATTTGTTACCCTTGTGTATATGGTA 3115
consensus_7887#1      TTGGCCAATATTCAGAAAAGGTGTACCCT------------------------------- 1584
consensus_7887#2      TTG-CCAATATTCAGAAAAGGGGTACCCTCGT-GCATTTGTTACCCTTGTGTATATG-TA 578
                      *** ***************** *******                               

consensus_7887#0      ATGAATGTGTGGTGAATCTTTAAAGTGAAGCTTATTGCGAATGAGAGTACCC 3167
consensus_7887#1      ----------------------------------------------------
consensus_7887#2      ATGAATGTGTGGTGAATCTTTAAA---------------------------- 602


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)