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Oryza sativa
cluster # 7891 cluster # 7891       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7891#0 length = 860 sequences # 5  

consensusID : consensus_7891#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 860
fasta sequence
                              [TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCGCTCACGCCGCCGCCGTCCTACTACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAGCAC-GGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGCACGGCGGCGGCGGCCGCGCGTTCGGGGACGACGACGACGATGACGACGACGGCGGCGACGACGACATGGCGGCGTCGACGGCGTGCTTCAGGGTGCGGCACGAGAGCTTCAGGGCCATCAAGAACTGCCGCGTCGCCATGACGGTGAGGAGCGCCATCTCGTCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCACGGCTCTAGCGCCGCCGTGGCGCAGAAGGCGGCGTAGCCTCTCCTCTTCTTGCCTCGTAGTTCACGCTGTCTGTCACTGTTACTCGGCTGCTGTTTCAACTTGGGGTGTAATTTGCAGGTTTTAACAGTGTTCTATTTACCATATGCATATATATGTGGCTTTTTCATGGAGTGATATTTATGGAAGAGTTTAATTACTATCACCAAAGTGTTATATGCTTAATTAATTAAGCTTGTATGAAGTATATATGGAGAATAATATATGAGCATGCATGGGTGTGCTAGAAT]

[+] EMBL AK122083             [TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCGCTCACGCCGCCGCCGTCCTACTACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAGCAC GGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGCACGGCGGCGGCGGCCGCGCGTTCGGGGACGACGACGACGATGACGACGACGGCGGCGACGACGACATGGCGGCGTCGACGGCGTGCTTCAGGGTGCGGCACGAGAGCTTCAGGGCCATCAAGAACTGCCGCGTCGCCATGACGGTGAGGAGCGCCATCTCGTCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCACGGCTCTAGCGCCGCCGTGGCGCAGAAGGCGGCGTAGCCTCTCCTCTTCTTGCCTCGTAGTTCACGCTGTCTGTCACTGTTACTCGGCTGCTGTTTCAACTTGGGGTGTAATTTGCAGGTTTTAACAGTGTTCTATTTACCATATGCATATATATGTGGCTTTTTCATGGAGTGATATTTATGGAAGAGTTTAATTACTATCACCAAAGTGTTATATGCTTAATTAATTAAGCTTGTATGAAGTATATATGGAGAATAATATATGAGCATGCATGGGTGTGCTAGAAT]
[+] EMBL AK101697             [TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCGCTCACGCCGCCGCCGTCCTACTACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAGCAC GGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGCACGGCGGCGGCGGCCGCGCGTTCGGGGACGACGACGACGATGACGACGACGGCGGCGACGACGACATGGCGGCGTCGACGGCGTGCTTCAGGGTGCGGCACGAGAGCTTCAGGGCCATCAAGAACTGCCGCGTCGCCATGACGGTGAGGAGCGCCATCTCGTCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCACGGCTCTAGCGCCGCCGTGGCGCAGAAGGCGGCGTAGCCTCTCCTCTTCTTGCCTCGTAGTTCACGCTGTCTGTCACTGTTACTCGGCTGCTGTTTCAACTTGGGGTGTAATTTGCAGGTTTTAACAGTGTTCTATTTACCATATGCATATATATGTGGCTTTTTCATGGAGTGATATTTATGGAAGAGTTTA                                                                                               ]
[+] EMBL AU081363             [TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCG TCACGCCGCCGCCGTCCTACTACACCGCCGGCAAGGTGTNCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAGCAC GGNATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGCAncgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU081362             [TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACGCCCAAGAAGGCCATGTCCGACGCCGTGCTGCCGCCGCTCANGCCGCCGCCGTCCTACNACACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAGCACGGGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAAGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU108740             [                                                                                                                                                      GGCGGCGGAGGAGGAAGGAAGTATGGGAAGCAC GGNATCCTCAGGTTGTTCGTGCTGCCCAANATCAGGCTGCGGAGAGGCGGCCGGCCGGTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCCTCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCGATGAGGAGCCTGCAGGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_7891#0 TACTACGGCGTCGCCTCCGCGGGCTCCGTGCCCTTCCTGTGGGAGTCGCAGCCGGGCACG CCCAAGAACGCCATGTCCGACGCCGTGCTGCCGCCGCTCACGCCGCCGCCGTCCTACTAC ACCGCCGGCAAGGTGTCCGCCGGCGGCGGCGGCGGCGGAGGAGGAAGGAAGTATGGGAAG CACGGCATCCTCAGGTTGTTCGTGCTGCCCAAGATCAGGCTGCGGAGAGGCGGCCGGCCG GTGTCGGGCTCGCCGACGTCGTCCTGCGCCTCCTCCACCTCGTCGTCGTCGTCGTCGGCC TCGTTCTACTCGTCGTACTCGCTGTCGTTCAGGAGCACGCAGTCGCCGACGTGCTCGTCG ATGAGGAGCCTGCAGGGGCACGGCGGCGGCGGCCGCGCGTTCGGGGACGACGACGACGAT GACGACGACGGCGGCGACGACGACATGGCGGCGTCGACGGCGTGCTTCAGGGTGCGGCAC GAGAGCTTCAGGGCCATCAAGAACTGCCGCGTCGCCATGACGGTGAGGAGCGCCATCTCG TCGGTGGCCGCCGGCGCCGGCGCCGGCGGCCACGGCTCTAGCGCCGCCGTGGCGCAGAAG GCGGCGTAGCCTCTCCTCTTCTTGCCTCGTAGTTCACGCTGTCTGTCACTGTTACTCGGC TGCTGTTTCAACTTGGGGTGTAATTTGCAGGTTTTAACAGTGTTCTATTTACCATATGCA TATATATGTGGCTTTTTCATGGAGTGATATTTATGGAAGAGTTTAATTACTATCACCAAA GTGTTATATGCTTAATTAATTAAGCTTGTATGAAGTATATATGGAGAATAATATATGAGC ATGCATGGGTGTGCTAGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)