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Oryza sativa
cluster # 7911 cluster # 7911       Sequences # 5       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7911#0 length = 2405 sequences # 2  
consensus_7911#1 length = 973 sequences # 1  
 consensus_7911#2 length = 509 sequences # 1  
consensus_7911#3 length = 333 sequences # 1  
consensusID : consensus_7911#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2405
fasta sequence 
                              [CTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCGTTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCTTCTCTCCTCCGATTCATCCGCCGCCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGGCGTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGCGAGGGCAAGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAAAAAGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGAATCTTGTGCTATGAGTTCTTATATGGGTCACCACCTTTTGAAGCAGCAGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGGTAAAATTTGTGGTATTGATTATACCTATTGTATATGTTACACTAAAATGGGTTGAACTTTTGAGTTTTGAGCTTCGAGTTCGTATGCAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGCTCGCACATAATACCTTTAAGAAACAAGGTACATTGGGAAGCATAACGTGCTAATGAAATACACACCTTACCTTCCCAGTCATCACCCTAGTATGCTGAGCTAAACATTAAACTTTATACACATTTGTCAGGCTACATTAAAACGATTCTGTTCTGTTCTCATTATGGACTATAATAATTTTCTTCATTTGTTTGTGAAGCATTTTAGGCCTACTTTGGATTGTAGGAATTCTAGATGATATTCGGAGGTTTCATTTCCTGTATTATTGAGTTACTGTTCACCCCTTTGGATTGGAGGAAGAAGGCATAGGAAATTTGGAGGAATTTTTCCTTTGCCTTTGATTTCGTAGGTAGTCCAAGGCAAATCAATGCATGTTACTCCAAATGATCATAGTTTTAAACACATACTAAGGAAAATAATACACATTTTATGCTTATTTAGGAAGAGTCCTGTGTTTTACTCTATTTATGTGTTCCAAACGATATGTATCATATTTTCCTATGTTTTTCAATCCTATATTTTGCGTATGCAATCCTATCGTATTACTACATTTTTTTCTATTCCTGTTTTTCCAATTCCTGCACTGCGAATGAGCCCTTGACTACCAATAGTGTCCTTCAGCTTTCCCAAACCTTGTCTGAGACTCTACTTTGGAAGTGGCAGGTTAAGGGTTTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTAGTTTTTCCACCTTGTGCCCGTTCTGAATTTGGACTCAAATCCTTGTGGCTTTCCCTGCTCTCTTATTTGTATTTATTTTTTGGCTCTTTTATGCAGGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTAGCTAATTAAGTAATTATGGATGTCTATATGTATCCGCTAATCCC-ACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAATGCATGACGTGAAGTCCTACCATGTTTATGTTTGCTGTTGTCCGCTCCTAAAGGAAGTTGGCTGGTGTAGCCGTACCAGTTTATGACCCTAATCCTCATCAGTCATCGGTGATAGCATCTTCATTACCCTAAGTGCCATGTTGTTGTTGTGGATAAAGTTACTTAACGGAAATATAAGTATACCAAGTGCATGTCTACCTACCTTAGGAAAATTGGTTCATATCTTCCCCATATTTGGTCTAGTTCGGTGTGGTTGCGCTAATGATTTAATCTAATGTAGCCTCATG]

[+] EMBL AK073918             [CTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCGTTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCTTCTCTCCTCCGATTCATCCGCCGCCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGGCGTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGCGAGGGCAAGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAAAAAGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGAATCTTGTGCTATGAGTTCTTATATGGGTCACCACCTTTTGAAGCAGCAGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGGTAAAATTTGTGGTATTGATTATACCTATTGTATATGTTACACTAAAATGGGTTGAACTTTTGAGTTTTGAGCTTCGAGTTCGTATGCAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGCTCGCACATAATACCTTTAAGAAACAAGGTACATTGGGAAGCATAACGTGCTAATGAAATACACACCTTACCTTCCCAGTCATCACCCTAGTATGCTGAGCTAAACATTAAACTTTATACACATTTGTCAGGCTACATTAAAACGATTCTGTTCTGTTCTCATTATGGACTATAATAATTTTCTTCATTTGTTTGTGAAGCATTTTAGGCCTACTTTGGATTGTAGGAATTCTAGATGATATTCGGAGGTTTCATTTCCTGTATTATTGAGTTACTGTTCACCCCTTTGGATTGGAGGAAGAAGGCATAGGAAATTTGGAGGAATTTTTCCTTTGCCTTTGATTTCGTAGGTAGTCCAAGGCAAATCAATGCATGTTACTCCAAATGATCATAGTTTTAAACACATACTAAGGAAAATAATACACATTTTATGCTTATTTAGGAAGAGTCCTGTGTTTTACTCTATTTATGTGTTCCAAACGATATGTATCATATTTTCCTATGTTTTTCAATCCTATATTTTGCGTATGCAATCCTATCGTATTACTACATTTTTTTCTATTCCTGTTTTTCCAATTCCTGCACTGCGAATGAGCCCTTGACTACCAATAGTGTCCTTCAGCTTTCCCAAACCTTGTCTGAGACTCTACTTTGGAAGTGGCAGGTTAAGGGTTTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTAGTTTTTCCACCTTGTGCCCGTTCTGAATTTGGACTCAAATCCTTGTGGCTTTCCCTGCTCTCTTATTTGTATTTATTTTTTGGCTCTTTTATGCAGGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTAGCTAATTAAGTAATTATGGATGTCTATATGTATCCGCTAATCCC ACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAATGCATGACGTGAAGTCCTACCATGTTTATGTTTGCTGTTGTCCGCTCCTAAAGGAAGTTGGCTGGTGTAGCCGTACCAGTTTATGACCCTAATCCTCATCAGTCATCGGTGATAGCATCTTCATTACCCTAAGTGCCATGTTGTTGTTGTGGATAAAGTTACTTAACGGAAATATAAGTATACCAAGTGCATGTCTACCTACCTTAGGAAAATTGGTTCATATCTTCCCCATATTTGGTCTAGTTCGGTGTGGTTGCGCTAATGATTTAATCTAATGTAGCCTCATG]
[+] EMBL C22505               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTATCCGCTAATCCCNACCTCACTGGGAAGCCCNAAGCTACCTAACTACACTGGCTAATGCATGACGTGAAGNCCTACCATGTTTATGTTTGCTGTTGTCCGCTCCTAAAGGAAGTTGGCTGGTGTANCCGTACCAGTTTATGACCCTAATCCTCATCAGTCANCGGTGATAGCATCTTCATTACCCTAAGTNCCATGTTGTTGTTGTGGATAAAGTTACTTAACGGAAATATAAGTATACCAAaaa                                                                                                  ]




>consensus_7911#0
CTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCGTTAATACTACTACTTCTCTCACG
AATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCTTCTCTCCTCCGATTCATCCGCCG
CCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGGCGTCCGA
TGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGCGAGGGCA
AGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCGCTCAAGG
TGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCG
AGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACG
CCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCC
GCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTG
CACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTAC
TCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATG
CTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAAAA
AGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGAATCTTGTGCTATGAGTTCTTAT
ATGGGTCACCACCTTTTGAAGCAGCAGAACAGGATGATACATTGAGGAGGATAGTTAAAG
TGGATTTGTCGTTCCCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCA
AGGTAAAATTTGTGGTATTGATTATACCTATTGTATATGTTACACTAAAATGGGTTGAAC
TTTTGAGTTTTGAGCTTCGAGTTCGTATGCAGCTTTTGGTGAAGGATTCAAACAAGAGAC
TTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGA
GTTGTAGTGACCAAAAGGCTCGCACATAATACCTTTAAGAAACAAGGTACATTGGGAAGC
ATAACGTGCTAATGAAATACACACCTTACCTTCCCAGTCATCACCCTAGTATGCTGAGCT
AAACATTAAACTTTATACACATTTGTCAGGCTACATTAAAACGATTCTGTTCTGTTCTCA
TTATGGACTATAATAATTTTCTTCATTTGTTTGTGAAGCATTTTAGGCCTACTTTGGATT
GTAGGAATTCTAGATGATATTCGGAGGTTTCATTTCCTGTATTATTGAGTTACTGTTCAC
CCCTTTGGATTGGAGGAAGAAGGCATAGGAAATTTGGAGGAATTTTTCCTTTGCCTTTGA
TTTCGTAGGTAGTCCAAGGCAAATCAATGCATGTTACTCCAAATGATCATAGTTTTAAAC
ACATACTAAGGAAAATAATACACATTTTATGCTTATTTAGGAAGAGTCCTGTGTTTTACT
CTATTTATGTGTTCCAAACGATATGTATCATATTTTCCTATGTTTTTCAATCCTATATTT
TGCGTATGCAATCCTATCGTATTACTACATTTTTTTCTATTCCTGTTTTTCCAATTCCTG
CACTGCGAATGAGCCCTTGACTACCAATAGTGTCCTTCAGCTTTCCCAAACCTTGTCTGA
GACTCTACTTTGGAAGTGGCAGGTTAAGGGTTTGTCCTGTAAGATTTAGGTGCTGTGAGA
AGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTAGTTTTTCCAC
CTTGTGCCCGTTCTGAATTTGGACTCAAATCCTTGTGGCTTTCCCTGCTCTCTTATTTGT
ATTTATTTTTTGGCTCTTTTATGCAGGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGC
TGGTGTAGTATTTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTAGCTAATTA
AGTAATTATGGATGTCTATATGTATCCGCTAATCCCACCTCACTGGGAAGCCCCAAGCTA
CCTAACTACACTGGCTAATGCATGACGTGAAGTCCTACCATGTTTATGTTTGCTGTTGTC
CGCTCCTAAAGGAAGTTGGCTGGTGTAGCCGTACCAGTTTATGACCCTAATCCTCATCAG
TCATCGGTGATAGCATCTTCATTACCCTAAGTGCCATGTTGTTGTTGTGGATAAAGTTAC
TTAACGGAAATATAAGTATACCAAGTGCATGTCTACCTACCTTAGGAAAATTGGTTCATA
TCTTCCCCATATTTGGTCTAGTTCGGTGTGGTTGCGCTAATGATTTAATCTAATGTAGCC
TCATG

consensusID : consensus_7911#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 973
fasta sequence 
                              [TCCGCCGGCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGGCGTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGCGAGGGCAAGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAANAAGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGATCTTGGGCTATGAGTTCTATTTGGGGCACCACCTTTTGAAGCAGCGAACAGGATGATCCATTAGGAGGATAGTAAAGGGATTTGCGTTCCCTCACTCCTATGTTCTGAGATGCTAGGATTCATTGCAGCTTTGGTGAAGTTAAACAAAGATTTCTTTGGTACATATGAACTTCCTGGTGGGAAAATGGAACTTCAGGGAGTGAGTGGCAAAGGTCGCATATCCTTTAGAACAAGGTATTCGCGATGAGGCCTGCGAGGTGTGTGATTGTGGAATGCTGTGCGAAGGCCGGTTTTTATGATAAATTATGGTTGTTGAGCGGGTCCGGTC]

[+] EMBL BE040040             [TCCGCCGGCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGGCGTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGCGAGGGCAAGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAANAAGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGATCTTGGGCTATGAGTTCTATTTGGGGCACCACCTTTTGAAGCAGCGAACAGGATGATCCATTAGGAGGATAGTAAAGGGATTTGCGTTCCCTCACTCCTATGTTCTGAGATGCTAGGATTCATTGCAGCTTTGGTGAAGTTAAACAAAGATTTCTTTGGTACATATGAACTTCCTGGTGGGAAAATGGAACTTCAGGGAGTGAGTGGCAAAGGTCGCATATCCTTTAGAACAAGGTATTCGCGATGAGGCCTGCGAGGTGTGTGATTGTGGAATGCTGTGCGAAGGCCGGTTTTTATGATAAATTATGGTTGTTGAGCGGGTCCGGTC]




>consensus_7911#1
TCCGCCGGCTTCGCGCCGCCGCCCTCGCCTCTCTTGCGCCTCCACCGGCCACCGCCGCGG
CGTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATCGGC
GAGGGCAAGTTCGGGAAGGTCTACCTCGCCCGCGAGAAGCAGAGCGGCTACGTGGTGGCG
CTCAAGGTGACATTCAAGGCGAAGCTGGACAAGTACAGGTTCCACGCGCACCTGCGGCGG
GAGATCGAGATCCAGCACGGCCTCGACCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTC
CACGACGCCGAGCGCGTCGTCCTCGTGCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAG
CTCCTCCGCACCGTCCGCCGCTTCTCTGAGCGCACCGCTGCTACTTATGTTGCCAGCCTT
GCCGGTGCACTAGCATACTGTCATAAGAAGCAAGTTATCCATCGGGACATCAAGCCAGAG
AATTTACTCCTTGATATTGAGGGCCGACTTAAAATTGCAGATTTTGGATGGGCGGTTAGA
TCAAATGCTAAACGACACACACTTTGTGGTACAATTGATTACCTGGCACCTGAAATGATA
GAGAANAAGGCTCATGACCATGCTGTTGACAACTGGACTTTAGGATCTTGGGCTATGAGT
TCTATTTGGGGCACCACCTTTTGAAGCAGCGAACAGGATGATCCATTAGGAGGATAGTAA
AGGGATTTGCGTTCCCTCACTCCTATGTTCTGAGATGCTAGGATTCATTGCAGCTTTGGT
GAAGTTAAACAAAGATTTCTTTGGTACATATGAACTTCCTGGTGGGAAAATGGAACTTCA
GGGAGTGAGTGGCAAAGGTCGCATATCCTTTAGAACAAGGTATTCGCGATGAGGCCTGCG
AGGTGTGTGATTGTGGAATGCTGTGCGAAGGCCGGTTTTTATGATAAATTATGGTTGTTG
AGCGGGTCCGGTC

consensusID : consensus_7911#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 509
fasta sequence 
                              [AGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGCTCGCACATAATACCTCTAAGAAACAAGGTTAAGGGCTTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTTTTTAGCTAATTAAGTAATTATGGATGTCTATATGTATCCGCTAATCCCACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAATGCATGACGTGAAGTCCT]

[+] EMBL CB096314             [AGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGCTCGCACATAATACCTCTAAGAAACAAGGTTAAGGGCTTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTTTTTAGCTAATTAAGTAATTATGGATGTCTATATGTATCCGCTAATCCCACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAATGCATGACGTGAAGTCCT]




>consensus_7911#2
AGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTCAACTCC
TTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGCTTTTGGTGAAGGATTCAAACAA
GAGACTTTCTCTTGATGACATAATGAAACATCCATGGATTGTGAAGAATGCAGACCCATC
AGGGAGTTGTAGTGACCAAAAGGCTCGCACATAATACCTCTAAGAAACAAGGTTAAGGGC
TTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGA
TGCAGCATACGAGGAGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTAT
TTTGGCGAATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTTTTTAGCTAATTAAGTAATT
ATGGATGTCTATATGTATCCGCTAATCCCACCTCACTGGGAAGCCCCAAGCTACCTAACT
ACACTGGCTAATGCATGACGTGAAGTCCT

consensusID : consensus_7911#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 333
fasta sequence 
                              [ACGGGGAGCGGCCGTCTTCGCATCTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCGTTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCTTCTCTCCTCCGATTCCTGCGTCGNCTTCGCGCCGNCGGCCTCGGCTNTCTTGCGNCTACACCGGCCANCGNCGCGGCGTTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATNGGCGGAGGGGAAGTTCGGGAAAGGTCTACTTCGCCCGGGAGAAAGAGAGCGGGCTAAGGTGGTGGGGGTCAAGGTGACA]

[+] EMBL C22504               [ACGGGGAGCGGCCGTCTTCGCATCTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCGTTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCTTCTCTCCTCCGATTCCTGCGTCGNCTTCGCGCCGNCGGCCTCGGCTNTCTTGCGNCTACACCGGCCANCGNCGCGGCGTTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGATCGGCAAGTACATNGGCGGAGGGGAAGTTCGGGAAAGGTCTACTTCGCCCGGGAGAAAGAGAGCGGGCTAAGGTGGTGGGGGTCAAGGTGACA]




>consensus_7911#3
ACGGGGAGCGGCCGTCTTCGCATCTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCG
TTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCT
TCTCTCCTCCGATTCCTGCGTCGNCTTCGCGCCGNCGGCCTCGGCTNTCTTGCGNCTACA
CCGGCCANCGNCGCGGCGTTCCGATGGAGAAGCCGGAGTGGAGCATGGACGACTTCGAGA
TCGGCAAGTACATNGGCGGAGGGGAAGTTCGGGAAAGGTCTACTTCGCCCGGGAGAAAGA
GAGCGGGCTAAGGTGGTGGGGGTCAAGGTGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7911#0      -----------------------CTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCG 37
consensus_7911#3      ACGGGGAGCGGCCGTCTTCGCATCTCTCCCCCATTCAAATTCCAATACTCCAAAGCACCG 60
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      -------------------------------AGAACAGGATGATACATTGAGGAGGATAG 29
                                                                                  

consensus_7911#0      TTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCT 97
consensus_7911#3      TTAATACTACTACTTCTCTCACGAATCCCCAATCCCTAAAATCCCCGTACGCCGCCCGCT 120
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      TTAAAGTGGATTTGTCGTTC-----CCCTCAACTCCTTATGTTTCTGCAGATGCTAAGGA 84
                                                                                  

consensus_7911#0      TCTCTCCTCCGA--TTCATCCGCCGCCTTCGCGCCGCCGCCCTCGCCTCTCTTGCG---- 151
consensus_7911#3      TCTCTCCTCCGA--TTCCTGCGTCGNCTTCGCGCCGNCGGCCTCGGCTNTCTTGCG---- 174
consensus_7911#1      ------------------TCCGCCGGCTTCGCGCCGCCGCCCTCGCCTCTCTTGCG---- 38
consensus_7911#2      TCTCATTTGCAAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAAT 144
                                           *  *  ***   *    * * *   **   *  *     

consensus_7911#0      ----CCTCCACCGGCCACCGCCGCGGCGT-CCGATGGAGAAGCCGGAGTGG--AGCATGG 204
consensus_7911#3      ----NCTACACCGGCCANCGNCGCGGCGTTCCGATGGAGAAGCCGGAGTGG--AGCATGG 228
consensus_7911#1      ----CCTCCACCGGCCACCGCCGCGGCGT-CCGATGGAGAAGCCGGAGTGG--AGCATGG 91
consensus_7911#2      GAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGC 204
                            * **  *            **   ** **   * **  * ****   *  * * 

consensus_7911#0      ACGACTTCGAGATCGGCAAGTACATCGGCG-AGGGCAAGTTCGGGAA-GGTCTACCTCGC 262
consensus_7911#3      ACGACTTCGAGATCGGCAAGTACATNGGCGGAGGGGAAGTTCGGGAAAGGTCTACTTCGC 288
consensus_7911#1      ACGACTTCGAGATCGGCAAGTACATCGGCG-AGGGCAAGTTCGGGAA-GGTCTACCTCGC 149
consensus_7911#2      TCGCACATAATACCTCTAAGAAACAAGGTTAAGGGCTTGTCCTGTAA-GATTTAGGT--G 261
                       **      * * *   *** *    **   ****   ** * * ** * * **  *   

consensus_7911#0      CCGCGAGAAGCAGAGCGGCT--AC-GTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCT 319
consensus_7911#3      CCGGGAGAAAGAGAGCGGGCTAAG-GTGGTGGGGGTCAAGGTGACA-------------- 333
consensus_7911#1      CCGCGAGAAGCAGAGCGGCT--AC-GTGGTGGCGCTCAAGGTGACATTCAAGGCGAAGCT 206
consensus_7911#2      CTGTGAGAAGTTTTGAAATTAGACCAAAGTGTAGTCTGATGCAGCATACGAGGAGTTACT 321
                      * * *****     *       *     ***  *    * *   **              

consensus_7911#0      GGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGA 379
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      GGACAAGTACAGGTTCCACGCGCACCTGCGGCGGGAGATCGAGATCCAGCACGGCCTCGA 266
consensus_7911#2      CCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGG-CGAATGCGTTGTTTG 380
                                                                                  

consensus_7911#0      CCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGT 439
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      CCACCCCAACGTGCTCCGTCTCTTCGCCTGGTTCCACGACGCCGAGCGCGTCGTCCTCGT 326
consensus_7911#2      CCAGTGGCCCGTATTTTTTTTTTTAGC-TAATTAAGTAATTATGGATGTCTATATGTATC 439
                                                                                  

consensus_7911#0      GCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTC 499
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      GCTCGAGTACGCCGCCCGTGGGGAGCTTTACAAGCTCCTCCGCACCGTCCGCCGCTTCTC 386
consensus_7911#2      CGCTAATCCCACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAATGCATGAC 499
                                                                                  

consensus_7911#0      TGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAA 559
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      TGAGCGCACCGCTGCTACTTATGTTGCCAGCCTTGCCGGTGCACTAGCATACTGTCATAA 446
consensus_7911#2      GTGAAGTCCT-------------------------------------------------- 509
                                                                                  

consensus_7911#0      GAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCG 619
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      GAAGCAAGTTATCCATCGGGACATCAAGCCAGAGAATTTACTCCTTGATATTGAGGGCCG 506
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTG 679
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ACTTAAAATTGCAGATTTTGGATGGGCGGTTAGATCAAATGCTAAACGACACACACTTTG 566
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAAAAAGGCTCATGACCATGCTGT 739
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      TGGTACAATTGATTACCTGGCACCTGAAATGATAGAGAANAAGGCTCATGACCATGCTGT 626
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TGACAACTGGACTTTAGGAATCTTGTGCTATGAGTTCTTATATGGGTCACCACCTTTTGA 799
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      TGACAACTGGACTTTAGGATCTTGGGCTATGAGTTCTATTTGGGGCACCACCTTTTGAAG 686
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AGCAGCAGAACAGGATGATACATTGAGGAGGATAGTTAAAGTGGATTTGTCGTTCCCCTC 859
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      CAGCGAACAGGATGATCCATTAGGAGGATAGTAAAGGGATTTGCGTTCCCTCACTCCTAT 746
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AACTCCTTATGTTTCTGCAGATGCTAAGGATCTCATTTGCAAGGTAAAATTTGTGGTATT 919
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      GTTCTGAGATGCTAGGATTCATTGCAGCTTTGGTGAAGTTAAACAAAGATTTCTTTGGTA 806
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      GATTATACCTATTGTATATGTTACACTAAAATGGGTTGAACTTTTGAGTTTTGAGCTTCG 979
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      CATATGAACTTCCTGGTGGGAAAATGGAACTTCAGGGAGTGAGTGGCAAAGGTCGCATAT 866
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AGTTCGTATGCAGCTTTTGGTGAAGGATTCAAACAAGAGACTTTCTCTTGATGACATAAT 1039
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      CCTTTAGAACAAGGTATTCGCGATGAGGCCTGCGAGGTGTGTGATTGTGGAATGCTGTGC 926
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      GAAACATCCATGGATTGTGAAGAATGCAGACCCATCAGGGAGTTGTAGTGACCAAAAGGC 1099
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      GAAGGCCGGTTTTTATGATAAATTATGGTTGTTGAGCGGGTCCGGTC------------- 973
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TCGCACATAATACCTTTAAGAAACAAGGTACATTGGGAAGCATAACGTGCTAATGAAATA 1159
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CACACCTTACCTTCCCAGTCATCACCCTAGTATGCTGAGCTAAACATTAAACTTTATACA 1219
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CATTTGTCAGGCTACATTAAAACGATTCTGTTCTGTTCTCATTATGGACTATAATAATTT 1279
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TCTTCATTTGTTTGTGAAGCATTTTAGGCCTACTTTGGATTGTAGGAATTCTAGATGATA 1339
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TTCGGAGGTTTCATTTCCTGTATTATTGAGTTACTGTTCACCCCTTTGGATTGGAGGAAG 1399
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AAGGCATAGGAAATTTGGAGGAATTTTTCCTTTGCCTTTGATTTCGTAGGTAGTCCAAGG 1459
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CAAATCAATGCATGTTACTCCAAATGATCATAGTTTTAAACACATACTAAGGAAAATAAT 1519
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ACACATTTTATGCTTATTTAGGAAGAGTCCTGTGTTTTACTCTATTTATGTGTTCCAAAC 1579
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      GATATGTATCATATTTTCCTATGTTTTTCAATCCTATATTTTGCGTATGCAATCCTATCG 1639
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TATTACTACATTTTTTTCTATTCCTGTTTTTCCAATTCCTGCACTGCGAATGAGCCCTTG 1699
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ACTACCAATAGTGTCCTTCAGCTTTCCCAAACCTTGTCTGAGACTCTACTTTGGAAGTGG 1759
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CAGGTTAAGGGTTTGTCCTGTAAGATTTAGGTGCTGTGAGAAGTTTTGAAATTAGACCAA 1819
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AGTGTAGTCTGATGCAGCATACGAGGAGTTAGTTTTTCCACCTTGTGCCCGTTCTGAATT 1879
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TGGACTCAAATCCTTGTGGCTTTCCCTGCTCTCTTATTTGTATTTATTTTTTGGCTCTTT 1939
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      TATGCAGGTTACTCCGTGTCATTGAGGGACCTGGTGAAGGCTGGTGTAGTATTTTGGCGA 1999
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ATGCGTTGTTTGCCAGTGGCCCGTATTTTTTTAGCTAATTAAGTAATTATGGATGTCTAT 2059
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ATGTATCCGCTAATCCCACCTCACTGGGAAGCCCCAAGCTACCTAACTACACTGGCTAAT 2119
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      GCATGACGTGAAGTCCTACCATGTTTATGTTTGCTGTTGTCCGCTCCTAAAGGAAGTTGG 2179
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CTGGTGTAGCCGTACCAGTTTATGACCCTAATCCTCATCAGTCATCGGTGATAGCATCTT 2239
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      CATTACCCTAAGTGCCATGTTGTTGTTGTGGATAAAGTTACTTAACGGAAATATAAGTAT 2299
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      ACCAAGTGCATGTCTACCTACCTTAGGAAAATTGGTTCATATCTTCCCCATATTTGGTCT 2359
consensus_7911#3      ------------------------------------------------------------
consensus_7911#1      ------------------------------------------------------------
consensus_7911#2      ------------------------------------------------------------
                                                                                  

consensus_7911#0      AGTTCGGTGTGGTTGCGCTAATGATTTAATCTAATGTAGCCTCATG 2405
consensus_7911#3      ----------------------------------------------
consensus_7911#1      ----------------------------------------------
consensus_7911#2      ----------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)