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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7926 cluster # 7926       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7926#0 length = 894 sequences # 5  

consensusID : consensus_7926#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 894
fasta sequence
                              [GTTCTTCCTCCTCATCTTGGAGAGGAACCCCAAGAGGCGAGCCTCCCGGCGCCGCCCACGAGACAGCGAATCCCACGAGAGGGCCTTGGAAGAAGAGGAAGCAGCGGCAACCCCCGCAGCCGACCGACCCCCCCTGTAGAGCGCATTCACTGGTTTAGATTGGAATTGGATGGCATCCGGAGGAGGCATCG-CCCGCG-CCCGCCTC-GCCGAGGAGCGCAAGGCGTGG-CGC-AAGAA-CCA-CCCCCATGGCTTCGTGGCCAAGCCGGAGACCCTGCCGGATGGGTCCGTCAACCTCATGGTCTGGCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGGTGGATATTTCCCACTTACTATGCAATTCACTGAAGACTATCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTTCTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATGGAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTGTTTGATGATCCAAACCCTAACTCTGCTGCACAGAATATAAGCTATGAGCTTTATAGGAAGGACATGGAGGAGTACAGGAAACGCGTTCGTCAGCAGGCTAAGAAGTATCCTTCAGCTCTGTAGCCGCGCAATGCCTGCAGGATTCTGGCAGCTAAAACATTTTGATTGAACCTATCATGAACCGCACCTGTAATTCGTGGGGACTAAACCCGGTGTTCATCGTCTGGTGTATTGAGTTGCCGAGTTGGCAACATGGTGATGTGTCTGTTGGAACTGCTAAAATACACTTTTAAGTCCACCTCNATGACTATTGTTTCTGGCCTGTCGGTGCCTCAACAGCAGAAAGTTTCGAGTTAAAAAAAAAA]

[+] EMBL C26870               [GTTCTTCCTCCTCATCTTGGAGAGGAACCCCAAGAGGCGAGCCTCCCGGCGCCGCCCACGAGACAGCGAATCCCACGAGAGGGCCTTGGAAGAAGAGGAAGCAGCGGCAACCCCCGCAGCCGACCGACCCCCCCTGTAGAGCGCATTCACTGGTTTAGATTGGAATTGGATGGCATCCGGAGGAGGCATCG CCCGCG CCCGCCTC GCCGAGGAGCGCAAGGCGTGG CGC AAGAA CCA CCCCCATGGCTTCGTGGCCAAGCCGGAGACCCTGCCGGATGGGTCCGTCAACCTCATGGTCTtngc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF313671             [                                                                      TCCCACGAGAGGGCCTTGGAAGAAGAGGAAGCAGCGGCAACCCCCGCAGCCGACCGACCCCCCCTGTAGAGCGCATTCACTGGTTTAGATTGGAATTGGATGGCATCCGGAGGAGGCATCG CCCGCG CCCGCCTC GCCGAGGAGCGCAAGGCGTGG CGC AAGAA CCA CCCCCATGGCTTCGTGGCCAAGCCGGAGACCCTGCCGGATGGGTCCGTCAACCTCATGGTCTGGCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGGTGGATATTTCCCACTTACTATGCAATTCACTGAAGACTATCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTTCTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATGGAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTG                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU100783             [                                                                                                                                                                                         GCATCGCCCCGCGNCCCGCTTCNGCCGAGGAGCGCAAGGCNTGGCCGCAAAGAACCCACCCCCCATGGCTTCGTGGCCAAGCCGGAGACCCTGCCGGATGGGTCCGTCAACCTCATGGTCTGGCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGTTGGATATTTCCCACTTACTATGCAATTCACTGAAGACTNTCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTTCTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATGGAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTGTTTGATGATCCAAACCCTAACTCTGCTGCACAGAATATAAGCTATGAGCTTTATAGGAAGGACATGGAGGAGTACAGGAAACGCGTTCGTCAGCAGGCTAAGAAGTATCCTTCAGCTCTGTAGCCGCGCAATGCCTGCAGGATTCTGGCAGCTAAAACATTTTGATTGAACCTATCATGAACCGCACCTGTAATTCGTGGGGACTAAACCCGGTGTTCATCGTCTGGTGTATTGAGTTGCCGAGTTGGCAACATGGTGATGTGTCTGTTGGAACTGCTAAAATACACTTTTAAGTCCACCTCNATGACTATTGTTTCTGGCCTGTCGGTGCCTCAACAGCAGAAAGTTTCGAGTTAAAAAA    ]
[-] EMBL CF313670             [                                                                                                                                                                                                                                                                                 CCCTGCCGGATGGGTCCGTCAACCTCATGGTCTGGCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGGTGGATATTTCCCACTTACTATGCAATTCACTGAAGACTATCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTTCTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATGGAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTGTTTGATGATCCAAACCCTAACTCTGCTGCACAGAATATAAGCTATGAGCTTTATAGGAAGGACATGGAGGAGTACAGGAAACGCGTTCGTCAGCAGGCTAAGAAGTATCCTTCAGCTCTGTAGCCGCGCAATGCCTGCAGGATTTTGGCAGCTAAAACATTTTGATTGAACCTATCATGAACCGCACCTGTAATTCGTGGGGACTAAACCCGGTGTTCATCGTCTGGTGTATTGAGTTGCCGAGTTGGCAACATGGTGATGTGTCTGTTGGAACTGCTAAAATACACTTTTAAGTCCACCTCCATGACTATTGTTTCTGGCCTGTCGGTGCCTCAACAGCAGAAAGTTTCGAGTTtttctaaaaa]
[+] EMBL AK121581             [                                                                                                                                                                                                                                                                                                CCGTCAACCTCATGGTCTGGCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGGTGGATATTTCCCACTTACTATGCAATTCACTGAAGACTATCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTTCTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATGGAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTGTTTGATGATCCAAACCCTAACTCTGCTGCACAGAATATAAGCTATGAGCTTTAT    AGGACATGGAGGAGTACAGGAAACGCGTTCGTCAGCAGGCTAAGAAGTATCCTTCAGCTCTGTAGCCGCGCAATGCCTGCAGGATTCTGGCAGCTAAAACATTTTGATTGAACCTATCATGAACCGCACCTGTAATTCGTGGGGACTAAACCCGGTGTTCATCGTCTGGTGTATTGAGTTGCCGAGTTGGCAACATGGTGATGTGTCTGTTGGAACTGCTAAAATACACTTTTA                                                                         ]


>consensus_7926#0 GTTCTTCCTCCTCATCTTGGAGAGGAACCCCAAGAGGCGAGCCTCCCGGCGCCGCCCACG AGACAGCGAATCCCACGAGAGGGCCTTGGAAGAAGAGGAAGCAGCGGCAACCCCCGCAGC CGACCGACCCCCCCTGTAGAGCGCATTCACTGGTTTAGATTGGAATTGGATGGCATCCGG AGGAGGCATCGCCCGCGCCCGCCTCGCCGAGGAGCGCAAGGCGTGGCGCAAGAACCACCC CCATGGCTTCGTGGCCAAGCCGGAGACCCTGCCGGATGGGTCCGTCAACCTCATGGTCTG GCGATGCATCATCCCCGGCAAAGAAGGGACTGATTGGGAGGGTGGATATTTCCCACTTAC TATGCAATTCACTGAAGACTATCCAACCAACGCTCCTTCTTGCAAGTTCCCATCGGGTTT CTTCCACATCAATGTCTATGACTCTGGGGCAGTATGCCTATCAATCTTGAGTACCGCATG GAAACCTTCAATTACAGTGAGGCAAATTCTTATAGGCATCCAGGAATTGTTTGATGATCC AAACCCTAACTCTGCTGCACAGAATATAAGCTATGAGCTTTATAGGAAGGACATGGAGGA GTACAGGAAACGCGTTCGTCAGCAGGCTAAGAAGTATCCTTCAGCTCTGTAGCCGCGCAA TGCCTGCAGGATTCTGGCAGCTAAAACATTTTGATTGAACCTATCATGAACCGCACCTGT AATTCGTGGGGACTAAACCCGGTGTTCATCGTCTGGTGTATTGAGTTGCCGAGTTGGCAA CATGGTGATGTGTCTGTTGGAACTGCTAAAATACACTTTTAAGTCCACCTCNATGACTAT TGTTTCTGGCCTGTCGGTGCCTCAACAGCAGAAAGTTTCGAGTTAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)