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Oryza sativa
cluster # 7935 cluster # 7935       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7935#0 length = 2236 sequences # 4  
consensus_7935#1 length = 677 sequences # 1  

consensusID : consensus_7935#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2236
fasta sequence
                              [CTCTATACGCTTCGAGCTCCGGGAGGCCCCTTTCATGGTTTCCTCCACCGTTCATGGGCCATGCCTTCCCTCTCCTTCCTCCGCTTCCTCTCCGGGAGGTCGCTCGCGGATGTGTGTGATGGGGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGCCGCGGAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGCGGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTACATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCACCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGTCGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCTCAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCTAGTCATACCGAAGTTAATCAGAGAAGAGCAAATCAAACTTATCATGACAATGCTGCTGCTCTTATTCTTGCTGCAATTTCTCCCCAAGGTGTACCACAGTATTTATATCATGAGGAAAATGCAGAAGGTGACTGGTTACATCTTTGGAACGATATGGTGGGGATTCGGGCTTAATCTTTTCGCCTATTTCATTGCTTCTCACATCGCAGGTGGATGTTGGTATGTCCTTGCGATTCAGCGTGTCGCCTCCTGCCTCCAGGAGGAATGCAAGATAAAGAACACTTGCAACCTAACATCACTTGCTTGCTCCAAGGAGATGTGTTTTCACCTTCCTTGGTCAGATAAGAATGGACTGGCATGCAACTTGACTTCTTTTGGCCAACAAAACATTCCAGACTGTCTAAGCGGCAATGGGCCCTTTGCTTATGGAATCTACAAAGGGGCTCTGCCTGTTATTTCCAGCAATTCACTTGCTGTTAAAATACTCTACCCTATATTTTGGGGACTCATGACTCTCAGTACTTTTGGTAATGATCTTGAGCCTACAAGCAATTGGCTTGAGGTGATTTTCAGCATAATCAATGTACTTAGCGGGTTGATGCTCTTCACATTGCTGATTGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGCAAGAAAGCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCAGTTGCCGTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCATCACGGGAGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACATCAAACGCTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGATCTCATCCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCGCTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCGGACGGCGCGCTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTGGCGCCGGTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGCCGGCGGGCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCTCAGGCCACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGCATATGCAATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTGATTCCATTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCATTGTATAAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAATAATGCAATGTGCTCCTTGGTTGGCGCCGCA]

[+] EMBL AK067626             [CTCTATACGCTTCGAGCTCCGGGAGGCCCCTTTCATGGTTTCCTCCACCGTTCATGGGCCATGCCTTCCCTCTCCTTCCTCCGCTTCCTCTCCGGGAGGTCGCTCGCGGATGTGTGTGATGGGGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGCCGCGGAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGCGGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTACATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCACCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGTCGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCTCAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCTAGTCATACCGAAGTTAATCAGAGAAGAGCAAATCAAACTTATCATGACAATGCTGCTGCTCTTATTCTTGCTGCAATTTCTCCCCAAGGTGTACCACAGTATTTATATCATGAGGAAAATGCAGAAGGTGACTGGTTACATCTTTGGAACGATATGGTGGGGATTCGGGCTTAATCTTTTCGCCTATTTCATTGCTTCTCACATCGCAGGTGGATGTTGGTATGTCCTTGCGATTCAGCGTGTCGCCTCCTGCCTCCAGGAGGAATGCAAGATAAAGAACACTTGCAACCTAACATCACTTGCTTGCTCCAAGGAGATGTGTTTTCACCTTCCTTGGTCAGATAAGAATGGACTGGCATGCAACTTGACTTCTTTTGGCCAACAAAACATTCCAGACTGTCTAAGCGGCAATGGGCCCTTTGCTTATGGAATCTACAAAGGGGCTCTGCCTGTTATTTCCAGCAATTCACTTGCTGTTAAAATACTCTACCCTATATTTTGGGGACTCATGACTCTCAGTACTTTTGGTAATGATCTTGAGCCTACAAGCAATTGGCTTGAGGTGATTTTCAGCATAATCAATGTACTTAGCGGGTTGATGCTCTTCACATTGCTGATTGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGCAAGAAAGCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCAGTTGCCGTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCATCACGGGAGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACATCAAACGCTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGATCTCATCCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCGCTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCGGACGGCGCGCTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTGGCGCCGGTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGCCGGCGGGCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCTCAGGCCACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGCATATGCAATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTGATTCCATTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCATTGTATAAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAATAATGCAATGTGCTCCTT             ]
[+] EMBL AK060339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGCAGAAGGTGACTGGTTACATCTTTGGAACGATATGGTGGGGATTCGGGCTTAATCTTTTCGCCTATTTCATTGCTTCTCACATCGCAGGTGGATGTTGGTATGTCCTTGCGATTCAGCGTGTCGCCTCCTGCCTCCAGGAGGAATGCAAGATAAAGAACACTTGCAACCTAACATCACTTGCTTGCTCCAAGGAGATGTGTTTTCACCTTCCTTGGTCAGATAAGAATGGACTGGCATGCAACTTGACTTCTTTTGGCCAACAAAACATTCCAGACTGTCTAAGCGGCAATGGGCCCTTTGCTTATGGAATCTACAAAGGGGCTCTGCCTGTTATTTCCAGCAATTCACTTGCTGTTAAAATACTCTACCCTATATTTTGGGGACTCATGACTCTCAGTACTTTTGGTAATGATCTTGAGCCTATAAGCAATTGGCTTGAGGTGATTTTCAGCATAATCAATGTACTTAGCGGGTTGATGCTCTTCACATTGCTGATTGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGCAAGAAAGCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCAGTTGCCGTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCATCACGGGAGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACATCAAACGCTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGATCTCATCCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCGCTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCAGACGGCGCGCTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTGGCGCCGGTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGCCGGCGGGCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCTCAGGCCACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGCATATGCAATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTGATTCCATTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCATTGTATAAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAATAATGCAATGTGCTCCTTGG           ]
[+] EMBL CF303533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGCAAGAAAGCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCAGTTGCCGTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCATCACGGGAGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACATCAAACGCTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGATCTCATCCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCGCTTCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB670887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCGCTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCGGACGGCGCGCTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTGGCGCCGGTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGCCGGCGGGCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCTCAGGCCACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGCATATGCAATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTGATTCCATTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCATTGTATAAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAGTAATGCAATGTGCTCCTTGGTTGGCGCCGCA]


>consensus_7935#0 CTCTATACGCTTCGAGCTCCGGGAGGCCCCTTTCATGGTTTCCTCCACCGTTCATGGGCC ATGCCTTCCCTCTCCTTCCTCCGCTTCCTCTCCGGGAGGTCGCTCGCGGATGTGTGTGAT GGGGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTG GCCGCGGAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGC GCTGGCGGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTG CGTGTACATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCT GGCGCACCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCT CGTCGTCGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCG CTCCCTCAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTT CTGGCTAGTCATACCGAAGTTAATCAGAGAAGAGCAAATCAAACTTATCATGACAATGCT GCTGCTCTTATTCTTGCTGCAATTTCTCCCCAAGGTGTACCACAGTATTTATATCATGAG GAAAATGCAGAAGGTGACTGGTTACATCTTTGGAACGATATGGTGGGGATTCGGGCTTAA TCTTTTCGCCTATTTCATTGCTTCTCACATCGCAGGTGGATGTTGGTATGTCCTTGCGAT TCAGCGTGTCGCCTCCTGCCTCCAGGAGGAATGCAAGATAAAGAACACTTGCAACCTAAC ATCACTTGCTTGCTCCAAGGAGATGTGTTTTCACCTTCCTTGGTCAGATAAGAATGGACT GGCATGCAACTTGACTTCTTTTGGCCAACAAAACATTCCAGACTGTCTAAGCGGCAATGG GCCCTTTGCTTATGGAATCTACAAAGGGGCTCTGCCTGTTATTTCCAGCAATTCACTTGC TGTTAAAATACTCTACCCTATATTTTGGGGACTCATGACTCTCAGTACTTTTGGTAATGA TCTTGAGCCTACAAGCAATTGGCTTGAGGTGATTTTCAGCATAATCAATGTACTTAGCGG GTTGATGCTCTTCACATTGCTGATTGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGC AAGAAAGCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCA GTTGCCGTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCAT CACGGGAGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACAT CAAACGCTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGA TCTCATCCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAA GGTGATCCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCG GAGCACGCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTT CCTCGGCGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGC GTCGTCGGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGA CCTTCGCTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCGGAC GGCGCGCTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTG GCGCCGGTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGC CGGCGGGCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCT CAGGCCACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGC ATATGCAATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTG ATTCCATTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCA TTGTATAAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAATAATGCAATGTGCTC CTTGGTTGGCGCCGCA



consensusID : consensus_7935#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 677
fasta sequence
                              [GGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGCCGGAGGGTCGAGCCGTCCGGCGGCGGCGGCGGCGGTGGCGGGGCCTCCCGGCGAGTGCTACGCGTGCACGCAGCCCGGGGTGCCGTCGTTCCACTCCACGACGTGCGACCAGGTGCACTCGCCGGACTGGGACGCGGACGCGGGCTCGTCGCTAGTGCCGGTCCAGGCGCAGCCGTCGGCGGCGCACCACGCGGCGGCGGCGGCGGCGCGGTGGGTGTTCGGCCCGGTGCTCGACCCGCGGAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGCGGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTACATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCACCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGTCGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCTCAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCTAGTCGTACCGAAGTTAA]

[+] EMBL CB670886             [GGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGCCGGAGGGTCGAGCCGTCCGGCGGCGGCGGCGGCGGTGGCGGGGCCTCCCGGCGAGTGCTACGCGTGCACGCAGCCCGGGGTGCCGTCGTTCCACTCCACGACGTGCGACCAGGTGCACTCGCCGGACTGGGACGCGGACGCGGGCTCGTCGCTAGTGCCGGTCCAGGCGCAGCCGTCGGCGGCGCACCACGCGGCGGCGGCGGCGGCGCGGTGGGTGTTCGGCCCGGTGCTCGACCCGCGGAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGCGGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTACATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCACCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGTCGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCTCAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCTAGTCGTACCGAAGTTAA]


>consensus_7935#1 GGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGC CGGAGGGTCGAGCCGTCCGGCGGCGGCGGCGGCGGTGGCGGGGCCTCCCGGCGAGTGCTA CGCGTGCACGCAGCCCGGGGTGCCGTCGTTCCACTCCACGACGTGCGACCAGGTGCACTC GCCGGACTGGGACGCGGACGCGGGCTCGTCGCTAGTGCCGGTCCAGGCGCAGCCGTCGGC GGCGCACCACGCGGCGGCGGCGGCGGCGCGGTGGGTGTTCGGCCCGGTGCTCGACCCGCG GAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGC GGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTA CATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCA CCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGT CGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCT CAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCT AGTCGTACCGAAGTTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7935#0      ------------------------------------------------------------
consensus_7935#1      GGTGAAGAGGAGGCTTGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCTGGTCTGGC 60
                                                                                  

consensus_7935#0      -----------------------------------------CTCTATACGCTTCGAGCTC 19
consensus_7935#1      CGGAGGGTCGAGCCGTCCGGCGGCGGCGGCGGCGGTGGCGGGGCCTCCCGGCGAGTGCTA 120
                                                                 *    **    * *** 

consensus_7935#0      CGGGAG-GCCCCTTTCATGGTTTCCTCCACCGTTCATGGGCCATGCCTTCCCTCTCCTTC 78
consensus_7935#1      CGCGTGCACGCAGCCCGGGGTGCCGTCGTTCCACTCCACGACGTGCGACCAGGTGCACTC 180
                      ** * *  * *    *  ***  * **   *        * * ***   *     *  **

consensus_7935#0      CTCCGCTTCCTCTCCGGGAGGTCGCTCGCGGAT-GTGTGTGATGGGGTGAAGAGGAGGCT 137
consensus_7935#1      GCCGGACTGGGACGCGGACGCGGGCTCGTCGCTAGTGCCGGTCCAGGCGCAGCCGTCGGC 240
                        * *  *      ***  *   *****  * * ***   *    ** * **  *  *  

consensus_7935#0      --TGGATTGGGGGATGATGAAGGCCGGGACGAGGAGGCT-GGTCTGG--------CCGCG 186
consensus_7935#1      GGCGCACCACGCGGCGGCGGCGGCGGCGCGGTGGGTGTTCGGCCCGGTGCTCGACCCGCG 300
                         * *    * *  *  *  *** * *  * **  * * ** * **        *****

consensus_7935#0      GAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGC 246
consensus_7935#1      GAGCAAGCGCGTGCAGCGGTGGAACCGGTGGATCCTGCTGGCCCGCGCCGCCGCGCTGGC 360
                      ************************************************************

consensus_7935#0      GGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTA 306
consensus_7935#1      GGTGGACCCGCTCTTCTTCTACGCGCTCTCCATCGGCCGCGCCGGGCAGCCGTGCGTGTA 420
                      ************************************************************

consensus_7935#0      CATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCA 366
consensus_7935#1      CATGGACGCCGGCCTCGCCGCCGCCGTCACGGCGCTCCGCACCGCCGCCGACCTGGCGCA 480
                      ************************************************************

consensus_7935#0      CCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGT 426
consensus_7935#1      CCTCGCCCACGTCCTCCTCCAGTTCCGCGTCGCCTACGTCTCCCGCGAGTCCCTCGTCGT 540
                      ************************************************************

consensus_7935#0      CGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCT 486
consensus_7935#1      CGGCTGCGGCAAGCTCGTCTGGGACCCCCGCGCCATCGCCGCTCACTACGCCCGCTCCCT 600
                      ************************************************************

consensus_7935#0      CAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCT 546
consensus_7935#1      CAAGGGCCTCTGGTTCGATCTCTTCGTCATCCTGCCCATCCCACAGGTCATCTTCTGGCT 660
                      ************************************************************

consensus_7935#0      AGTCATACCGAAGTTAATCAGAGAAGAGCAAATCAAACTTATCATGACAATGCTGCTGCT 606
consensus_7935#1      AGTCGTACCGAAGTTAA------------------------------------------- 677
                      **** ************                                           

consensus_7935#0      CTTATTCTTGCTGCAATTTCTCCCCAAGGTGTACCACAGTATTTATATCATGAGGAAAAT 666
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCAGAAGGTGACTGGTTACATCTTTGGAACGATATGGTGGGGATTCGGGCTTAATCTTTT 726
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CGCCTATTTCATTGCTTCTCACATCGCAGGTGGATGTTGGTATGTCCTTGCGATTCAGCG 786
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      TGTCGCCTCCTGCCTCCAGGAGGAATGCAAGATAAAGAACACTTGCAACCTAACATCACT 846
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      TGCTTGCTCCAAGGAGATGTGTTTTCACCTTCCTTGGTCAGATAAGAATGGACTGGCATG 906
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CAACTTGACTTCTTTTGGCCAACAAAACATTCCAGACTGTCTAAGCGGCAATGGGCCCTT 966
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      TGCTTATGGAATCTACAAAGGGGCTCTGCCTGTTATTTCCAGCAATTCACTTGCTGTTAA 1026
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      AATACTCTACCCTATATTTTGGGGACTCATGACTCTCAGTACTTTTGGTAATGATCTTGA 1086
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCCTACAAGCAATTGGCTTGAGGTGATTTTCAGCATAATCAATGTACTTAGCGGGTTGAT 1146
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCTCTTCACATTGCTGATTGGAAACATACAGGTCTTCTTGCATGCTGTCTTAGCAAGAAA 1206
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCGAAAGATGCAGCTGCGGTTCCGGGACATGGAATGGTGGATGCGGCGGAGGCAGTTGCC 1266
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GTCCCGCCTGAGGCAGAGGGTCCGGAAGTACGAGCGTGAACGCTGGGCGGCCATCACGGG 1326
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      AGATGAGGAGATGGAGATGATCAAGGACCTGCCTGAAGGGCTCAGGCGAGACATCAAACG 1386
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CTACCTCTGCCTCGAGCTAGTTAAACAGGTTCCTCTGTTCCATGGCATGGACGATCTCAT 1446
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CCTGGACAACATCTGCGACAGGCTGAGGCCGCTGGTGTTCTCCAGCGGCGAGAAGGTGAT 1506
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CCGGGAGGGCGACCCGGTGCAGCGGATGGTGTTCGTCCTCCAGGGGAAGCTCCGGAGCAC 1566
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCAGCCGCTGGCCAAGGGCGTGGTGGCGACGTGTATGCTCGGCGCCGGCAACTTCCTCGG 1626
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CGACGAGCTGCTGTCGTGGTGCCTCCGGCGGCCGTCCCTGGACCGGCTGCCGGCGTCGTC 1686
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GGCGACGTTCGAGTGCGTCGAGACGGCGCAGGCGTTCTGCCTCGACGCCCCCGACCTTCG 1746
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CTTCATCACGGAGCAGTTCCGGTACAAGTTCGCCAACGAGAAGCTCAAGCGGACGGCGCG 1806
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      CTACTACTCCTCCAACTGGCGGACGTGGGCGGCCGTCAACATCCAGCTCGCGTGGCGCCG 1866
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GTACAAGGCAAGGACGACGACCGACCTGGCGTCGGCGGCGCAGCCGCCGTCCGCCGGCGG 1926
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      GCCCGACGACGGGGACCGCCGGCTCCGCCATTACGCGGCCATGTTCATGTCGCTCAGGCC 1986
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      ACACGATCACCTCGAGTGAGAGCAGCCGTGGATTGGGACCGAGAGTGACGGGGCATATGC 2046
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      AATGCAACCGTACGCGCATGGAGCGGACCACCCTGCGCCGGCCATATATCATTGATTCCA 2106
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      TTGTAGTACGATCGTATCCTGCTGCCGGTCTTGACAATTGATTAGCATTTGTCATTGTAT 2166
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      AAGATGACCAATAATGGTTATGATGTAGTTCCAACAAAATAATGCAATGTGCTCCTTGGT 2226
consensus_7935#1      ------------------------------------------------------------
                                                                                  

consensus_7935#0      TGGCGCCGCA 2236
consensus_7935#1      ----------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)