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Oryza sativa
cluster # 7937 cluster # 7937       Sequences # 5       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7937#0 length = 2812 sequences # 4  
 consensus_7937#1 length = 245 sequences # 1  
consensusID : consensus_7937#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2812
fasta sequence 
                              [TGGAACCCTAAACTCCACCGCTCCCATCTCGTCTCGATCCCCTCCATTTCAAATCCACACTCCGCCTCCCCTCTCCGGCCGCCGCCGGCGAGATGGATCTCTCCGCCACCCCGTCCAGATCCAAATCCGGCCTCAGATCCTCCCCGAGGAAGCCCGTCGCCGCCCCCGCCGTGGCCCAGATGGACCTCTCCACCCCGTCCAAGCCGACCCCCAGGCGGAAGCCCAAGGCGCCGCCCGGTGGCGGCTCCGATGTCCCCCGTGACCCCGTCCTCCGTCCGCCGCTCCTCCCGCCTCCTCGAGACGCCGACCAAGGTAACTTCCGAGACCCCCGTGAAGCCCACCCCAACCCCGAAGCGGAA-CGCGCCGCGCCGTCGCCGTCGCCGAAGACGCCGACCCAGTCCGAGCCCAAGCGGCAGC------GGCAGAGGCAGAGGCAGCAGCCGAAGAAGCCGAAGAAGAGGGCGTACTACCGGAAGGTGGTGTACGACGGCGGGGAGTTCGCCGCCGGGGACGACGTGTACGTGAAGCGGCGGGATGGCGCGGAGTCCGACGCGGAAGACCCGGAGGCGGAGGAGTGCCGCGTGTGCTTCCGCGCCGGCGCCGCGGTGATGGTGGAGTGCGACGTGTGCCTCGGCGGGTTCCACCTGCGGTGCGTGCGCCCGCCGCTGCGGCGCGTGCCGGAGGGGGACTGGGCGTGCCCCTACTGCGAGGCCGAGCGCGCGGGGAAGGCCATCGAGAGGCCCAAGCCGCCGGAGGGGAAGCGCATCGTGAGGACCGCCAAAGAGAAGCTTCTCTCCAGTGATTTGTGGGCTGCACGAATCGAGAGTTTATGGAGGGAGCCAGATGGAATATTCTGGGCAAAGGTAAGATGGTATATTATCCCTGAAGAGACTGCAGCAGGAAGGCAGCCACATAATTTGCGTAGGGAGCTGTACCGCACCAATGATCTTGCAGACATTGAGATGGAAACAATTCTTAGACATTGTTATGTCATGAGCCCCAAAGAATTTAAGGATGCTAGTGATCAAGGAGATGACGTATTCTACTGTGAATATGAATATGACATACACTGGCATAATTTTAAGCGTCTGGCAGACATCGATGATGAACCTGAGACAAAGGAAGATCCTGGCGACGAGCCATACAATGCTGGTAATGATTATGTCAGTGACTCGGATGAAGATTCTGAATATGATGAGGAGGAAGAACCTACTAAATGTAGTTCTGCTAGAACACATCAATCACATGCGTTGGCTGCGAATCTGCGGAAAGGGAGGACATATGGCCTACAAAAAATTGGGATCCGTAAAATTCCTGAACATGTCCGGTGTCATCAAAAGACCAATCTGGAGAAGGCAAAAGCAACCCTGTTATTGGCAAATCTTCCTAAGTCGTTACCTTGTAGGGATAAAGAAATGGAGGAGATATCTGCATTTGTGAAGGATGCAATTTGCAATGATCAATGTATAGGACGCTGCCTTTATATTCATGGTGTACCAGGCACTGGCAAGACTATGAGTGTACTTGCAGTTATGAGGAGGCTAAGATCCGAGCTTGATTCTGGGAATCTGAGGCCTTATTCTTTCATAGAGATTAATGGTCTTAAATTAGCTTCTCCAGAGAATATCTACAAGGTTATATATGAACAGTTGAGTGGGCATAGGGTAGGGTGGAAAAAAGCCCTTCATTATTTAACCGAGCACTTTTCAGGTGGCACTAAAATTGGCAAACAAGCAAACCAGCCAATTATTTTGCTCATCGATGAGCTTGATCTTCTTTTGACGAGAAATCAGTCGGTGCTGTATAACATTCTTGACTGGCCCACCAGGCCAAATTCAAACCTAGTTGTCATAGGTATAGCGAACACAATGGATCTTCCTGAAAAGTTATTGCTTCGTATTTCAAGTCGGATGGGTATCCAACGACTGTGTTTTGGCCCATATAATTATCGGCAACTGCAGGAGATCATTACAAGCCGTTTAAAGGGCATTGATGCCTTTGAAGACCAAGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCTATGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATTACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGGGTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGAACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTGGGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCAACAGAGAATTATTGCCTGGCTATGATAATCTTCTGAAAATCTGTTGCAAGCTTGGTGAAGGTAAGATAATTTTCTGCGAGGAAGGCACTAAGCACAAGTTGCAGAAGCTTCAGCTTAACTATCCAAGTGACGATGTAACTTTTGCCCTGAAGGAATCCCCAGATATTCCATGGTTGTCCAAGTACCTGTGAAGTTTACACTTGCAGCGGTTGTACTTTCCCAGCATTTCATTCATCTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAAAAAAAAAAAAA]

[+] EMBL AB037135             [TGGAACCCTAAACTCCACCGCTCCCATCTCGTCTCGATCCCCTCCATTTCAAATCCACACTCCGCCTCCCCTCTCCGGCCGCCGCCGGCGAGATGGATCTCTCCGCCACCCCGTCCAGATCCAAATCCGGCCTCAGATCCTCCCCGAGGAAGCCCGTCGCCGCCCCCGCCGTGGCCCAGATGGACCTCTCCACCCCGTCCAAGCCGACCCCCAGGCGGAAGCCCAAGGCGCCGCCCGGTGGCGGCTCCGATGTCCCCCGTGACCCCGTCCTCCGTCCGCCGCTCCTCCCGCCTCCTCGAGACGCCGACCAAGGTAACTTCCGAGACCCCCGTGAAGCCCACCCCAACCCCGAAGCGGAA CGCGCCGCGCCGTCGCCGTCGCCGAAGACGCCGACCCAGTCCGAGCCCAAGCGGCAGC      GGCAGAGGCAGAGGCAGCAGCCGAAGAAGCCGAAGAAGAGGGCGTACTACCGGAAGGTGGTGTACGACGGCGGGGAGTTCGCCGCCGGGGACGACGTGTACGTGAAGCGGCGGGATGGCGCGGAGTCCGACGCGGAAGACCCGGAGGCGGAGGAGTGCCGCGTGTGCTTCCGCGCCGGCGCCGCGGTGATGGTGGAGTGCGACGTGTGCCTCGGCGGGTTCCACCTGCGGTGCGTGCGCCCGCCGCTGCGGCGCGTGCCGGAGGGGGACTGGGCGTGCCCCTACTGCGAGGCCGAGCGCGCGGGGAAGGCCATCGAGAGGCCCAAGCCGCCGGAGGGGAAGCGCATCGTGAGGACCGCCAAAGAGAAGCTTCTCTCCAGTGATTTGTGGGCTGCACGAATCGAGAGTTTATGGAGGGAGCCAGATGGAATATTCTGGGCAAAGGTAAGATGGTATATTATCCCTGAAGAGACTGCAGCAGGAAGGCAGCCACATAATTTGCGTAGGGAGCTGTACCGCACCAATGATCTTGCAGACATTGAGATGGAAACAATTCTTAGACATTGTTATGTCATGAGCCCCAAAGAATTTAAGGATGCTAGTGATCAAGGAGATGACGTATTCTACTGTGAATATGAATATGACATACACTGGCATAATTTTAAGCGTCTGGCAGACATCGATGATGAACCTGAGACAAAGGAAGATCCTGGCGACGAGCCATACAATGCTGGTAATGATTATGTCAGTGACTCGGATGAAGATTCTGAATATGATGAGGAGGAAGAACCTACTAAATGTAGTTCTGCTAGAACACATCAATCACATGCGTTGGCTGCGAATCTGCGGAAAGGGAGGACATATGGCCTACAAAAAATTGGGATCCGTAAAATTCCTGAACATGTCCGGTGTCATCAAAAGACCAATCTGGAGAAGGCAAAAGCAACCCTGTTATTGGCAAATCTTCCTAAGTCGTTACCTTGTAGGGATAAAGAAATGGAGGAGATATCTGCATTTGTGAAGGATGCAATTTGCAATGATCAATGTATAGGACGCTGCCTTTATATTCATGGTGTACCAGGCACTGGCAAGACTATGAGTGTACTTGCAGTTATGAGGAGGCTAAGATCCGAGCTTGATTCTGGGAATCTGAGGCCTTATTCTTTCATAGAGATTAATGGTCTTAAATTAGCTTCTCCAGAGAATATCTACAAGGTTATATATGAACAGTTGAGTGGGCATAGGGTAGGGTGGAAAAAAGCCCTTCATTATTTAACCGAGCACTTTTCAGGTGGCACTAAAATTGGCAAACAAGCAAACCAGCCAATTATTTTGCTCATCGATGAGCTTGATCTTCTTTTGACGAGAAATCAGTCGGTGCTGTATAACATTCTTGACTGGCCCACCAGGCCAAATTCAAACCTAGTTGTCATAGGTATAGCGAACACAATGGATCTTCCTGAAAAGTTATTGCTTCGTATTTCAAGTCGGATGGGTATCCAACGACTGTGTTTTGGCCCATATAATTATCGGCAACTGCAGGAGATCATTACAAGCCGTTTAAAGGGCATTGATGCCTTTGAAGACCAAGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCTATGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATTACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGGGTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGAACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTGGGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCAACAGAGAATTATTGCCTGGCTATGATAATCTTCTGAAAATCTGTTGCAAGCTTGGTGAAGGTAAGATAATTTTCTGCGAGGAAGGCACTAAGCACAAGTTGCAGAAGCTTCAGCTTAACTATCCAAGTGACGATGTAACTTTTGCCCTGAAGGAATCCCCAGATATTCCATGGTTGTCCAAGTACCTGTGAAGTTTACACTTGCAGCGGTTGTACTTTCCCAGCATTTCATTCATTTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAAAAAAAAA    ]
[+] EMBL AK103068             [                                                     TCCACACTCCGCCTCCCCTCTCCGGCCGCCGCCGGCGAGATGGATCTCTCCGCCACCCCGTCCAGATCCAAATCCGGCCTCAGATCCTCCCCGAGGAAGCCCGTCGCCGCCCCCGCCGTGGCCCAGATGGACCTCTCCACCCCGTCCAAGCCGACCCCCAGGCGGAAGCCCAAGGCGCCG CCGGTGGCGGCTCCGATGTCCCCCGTGACCCCGTCCTCCGTCCGCCGCTCCTCCCGCCTCCTCGAGACGCCGACCAAGGTAACTTCCGAGACCCCCGTGAAGCCCACCCCAACCCCGAAGCGGAAGCGCGCCGCGCCGTCGCCGTCGCCGAAGACGCCGACCCAGTCCGAGCCCAAGCGGCAGCGGCAGAGGCAGAGGCAGAGGCAGCAGCCGAAGAAGCCGAAGAAGAGGGCGTACTACCGGAAGGTGGTGTACGACGGCGGGGAGTTCGCCGCCGGGGACGACGTGTACGTGAAGCGGCGGGATGGCGCGGAGTCCGACGCGGAGGACCCGGAGGCGGAGGAGTGCCGCGTGTGCTTCCGCGCCGGCGCCGCGGTGATGGTGGAGTGCGACGTGTGCCTCGGCGGGTTCCACCTGCGGTGCGTGCGCCCGCCGCTGCGGCGCGTGCCGGAGGGGGACTGGGCGTGCCCCTACTGCGAGGCCGAGCGCGCGGGGAAGGCCATCGAGAGGCCCAAGCCGCCGGAGGGGAAGCGCATCGTGAGGACCGCCAAAGAGAAGCTTCTCTCCAGTGATTTGTGGGCTGCACGAATCGAGAGTTTATGGAGGGAGCCAGATGGAATATTCTGGGCAAAGGTAAGATGGTATATTATCCCTGAAGAGACTGCAGCAGGAAGGCAGCCACATAATTTGCGTAGGGAGCTGTACCGCACCAATGATCTTGCAGACATTGAGATGGAAACAATTCTTAGACATTGTTATGTCATGAGCCCCAAAGAATTTAAGGATGCTAGTGATCAAGGAGATGACGTATTCTACTGTGAATATGAATATGACATACACTGGCATAATTTTAAGCGTCTGGCAGACATCGATGATGAACCTGAGACAAAGGAAGATCCTGGCGACGAGCCATACAATGCTGGTAATGATTATGTCAGTGACTCGGATGAAGATTCTGAATATGATGAGGAGGAAGAACCTACTAAATGTAGTTCTGCTAGAACACATCAATCACATGCGTTGGCTGCGAATCTGCGGAAAGGGAGGACATATGGCCTACAAAAAATTGGGATCCGTAAAATTCCTGAACATGTCCGGTGTCATCAAAAGACCAATCTGGAGAAGGCAAAAGCAACCCTGTTATTGGCAACTCTTCCTAAGTCGTTACCTTGTAGGGATAAAGAAATGGAGGAGATATCTGCATTTGTGAAGGATGCAATTTGCAATGATCAATGTCTAGGACGCTGCCTTTATATTCATGGTGTACCAGGCACTGGCAAGACTATGAGTGTACTTGCAGTTATGAGGAGGCTAAGATCCGAGCTTGATTCTGGGAATCTGAGGCCTTATTCTTTCATAGAGATTAATGGTCTTAAATTAGCTTCTCCAGAGAATATCTACAAGGTTATATATGAACAGTTGAGTGGGCATAGGGTAGGGTGGAAAAAAGCCCTTCATTATTTAACCGAGCACTTTTCAGGTGGCACTAAAATTGGCAAACAAGCAAACCAGCCAATTATTTTGCTCATCGATGAGCTTGATCTTCTTTTGACGAGAAATCAGTCGGTGCTGTATAACATTCTTGACTGGCCCACCAGGCCAAATTCAAACCTAGTTGTCATAGGTATAGCGAACACAATGGATCTTCCTGAAAAGTTATTGCCTCGTATTTCAAGTCGGATGGGTATCCAACGACTGTGTTTTGGCCCATATAATTATCGGCAACTGCAGGAGATCATTACAAGCCGTCTAAAGGGCATTGATGCCTTTGAAGACCAAGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCTATGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATTACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGGGTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGAACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTGGGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCAACAGAGAATTATTGCCTGGCTATGATACTCTTCTGAAAATCTGTTGCAAGCTTGGTGAAGGTAAGATAATTCTCTGCGAGGAAGGCACTAAGCACAAGTTGCAGAAGCTTCAGCTTAACTATCCAAGTGACGATGTAACTTTTGCCCTGAAGGAATCCCCAGATATTCCATGGTTGTCCAAGTACCTGTGAAGTTTACACTTGCAGCGGTTGTACTTTCCCAGCATTTCATTCATCTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCATTTTATTTTCGCCAATCTG                          ]
[+] EMBL OSS3529A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGTAGCTGCTATGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATTACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGGGTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGAACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTGGGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCAACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU174293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAGTTTACACTTGCAGCGGNTGTACTTTCCCAGCATTTCATTCATCTACTCCTGGAGTTGGAGAGCAACGATNGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATNTTNCAAAANATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCNCCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCNTTTTATTTTCGCCAATCTGTTGTTACCCNAGGAAAAAAAAAAAAA]




>consensus_7937#0
TGGAACCCTAAACTCCACCGCTCCCATCTCGTCTCGATCCCCTCCATTTCAAATCCACAC
TCCGCCTCCCCTCTCCGGCCGCCGCCGGCGAGATGGATCTCTCCGCCACCCCGTCCAGAT
CCAAATCCGGCCTCAGATCCTCCCCGAGGAAGCCCGTCGCCGCCCCCGCCGTGGCCCAGA
TGGACCTCTCCACCCCGTCCAAGCCGACCCCCAGGCGGAAGCCCAAGGCGCCGCCCGGTG
GCGGCTCCGATGTCCCCCGTGACCCCGTCCTCCGTCCGCCGCTCCTCCCGCCTCCTCGAG
ACGCCGACCAAGGTAACTTCCGAGACCCCCGTGAAGCCCACCCCAACCCCGAAGCGGAAC
GCGCCGCGCCGTCGCCGTCGCCGAAGACGCCGACCCAGTCCGAGCCCAAGCGGCAGCGGC
AGAGGCAGAGGCAGCAGCCGAAGAAGCCGAAGAAGAGGGCGTACTACCGGAAGGTGGTGT
ACGACGGCGGGGAGTTCGCCGCCGGGGACGACGTGTACGTGAAGCGGCGGGATGGCGCGG
AGTCCGACGCGGAAGACCCGGAGGCGGAGGAGTGCCGCGTGTGCTTCCGCGCCGGCGCCG
CGGTGATGGTGGAGTGCGACGTGTGCCTCGGCGGGTTCCACCTGCGGTGCGTGCGCCCGC
CGCTGCGGCGCGTGCCGGAGGGGGACTGGGCGTGCCCCTACTGCGAGGCCGAGCGCGCGG
GGAAGGCCATCGAGAGGCCCAAGCCGCCGGAGGGGAAGCGCATCGTGAGGACCGCCAAAG
AGAAGCTTCTCTCCAGTGATTTGTGGGCTGCACGAATCGAGAGTTTATGGAGGGAGCCAG
ATGGAATATTCTGGGCAAAGGTAAGATGGTATATTATCCCTGAAGAGACTGCAGCAGGAA
GGCAGCCACATAATTTGCGTAGGGAGCTGTACCGCACCAATGATCTTGCAGACATTGAGA
TGGAAACAATTCTTAGACATTGTTATGTCATGAGCCCCAAAGAATTTAAGGATGCTAGTG
ATCAAGGAGATGACGTATTCTACTGTGAATATGAATATGACATACACTGGCATAATTTTA
AGCGTCTGGCAGACATCGATGATGAACCTGAGACAAAGGAAGATCCTGGCGACGAGCCAT
ACAATGCTGGTAATGATTATGTCAGTGACTCGGATGAAGATTCTGAATATGATGAGGAGG
AAGAACCTACTAAATGTAGTTCTGCTAGAACACATCAATCACATGCGTTGGCTGCGAATC
TGCGGAAAGGGAGGACATATGGCCTACAAAAAATTGGGATCCGTAAAATTCCTGAACATG
TCCGGTGTCATCAAAAGACCAATCTGGAGAAGGCAAAAGCAACCCTGTTATTGGCAAATC
TTCCTAAGTCGTTACCTTGTAGGGATAAAGAAATGGAGGAGATATCTGCATTTGTGAAGG
ATGCAATTTGCAATGATCAATGTATAGGACGCTGCCTTTATATTCATGGTGTACCAGGCA
CTGGCAAGACTATGAGTGTACTTGCAGTTATGAGGAGGCTAAGATCCGAGCTTGATTCTG
GGAATCTGAGGCCTTATTCTTTCATAGAGATTAATGGTCTTAAATTAGCTTCTCCAGAGA
ATATCTACAAGGTTATATATGAACAGTTGAGTGGGCATAGGGTAGGGTGGAAAAAAGCCC
TTCATTATTTAACCGAGCACTTTTCAGGTGGCACTAAAATTGGCAAACAAGCAAACCAGC
CAATTATTTTGCTCATCGATGAGCTTGATCTTCTTTTGACGAGAAATCAGTCGGTGCTGT
ATAACATTCTTGACTGGCCCACCAGGCCAAATTCAAACCTAGTTGTCATAGGTATAGCGA
ACACAATGGATCTTCCTGAAAAGTTATTGCTTCGTATTTCAAGTCGGATGGGTATCCAAC
GACTGTGTTTTGGCCCATATAATTATCGGCAACTGCAGGAGATCATTACAAGCCGTTTAA
AGGGCATTGATGCCTTTGAAGACCAAGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCTA
TGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATT
ACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGG
GTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGA
ACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTG
GGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCA
ACAGAGAATTATTGCCTGGCTATGATAATCTTCTGAAAATCTGTTGCAAGCTTGGTGAAG
GTAAGATAATTTTCTGCGAGGAAGGCACTAAGCACAAGTTGCAGAAGCTTCAGCTTAACT
ATCCAAGTGACGATGTAACTTTTGCCCTGAAGGAATCCCCAGATATTCCATGGTTGTCCA
AGTACCTGTGAAGTTTACACTTGCAGCGGTTGTACTTTCCCAGCATTTCATTCATCTACT
CCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTT
ATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAA
AATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAG
GTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAAAAAAAAAAAAA

consensusID : consensus_7937#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 245
fasta sequence 
                              [CTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAACTTTGCTCTGGCAGTGTTG]

[+] EMBL AK105033             [CTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAGGTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAACTTTGCTCTGGCAGTGTTG]




>consensus_7937#1
CTACTCCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGG
AATTTATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGC
AACAAAATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGAT
TGTAGGTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAACTTTGCTCTGGCAG
TGTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7937#0      TGGAACCCTAAACTCCACCGCTCCCATCTCGTCTCGATCCCCTCCATTTCAAATCCACAC 60
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TCCGCCTCCCCTCTCCGGCCGCCGCCGGCGAGATGGATCTCTCCGCCACCCCGTCCAGAT 120
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      CCAAATCCGGCCTCAGATCCTCCCCGAGGAAGCCCGTCGCCGCCCCCGCCGTGGCCCAGA 180
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TGGACCTCTCCACCCCGTCCAAGCCGACCCCCAGGCGGAAGCCCAAGGCGCCGCCCGGTG 240
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GCGGCTCCGATGTCCCCCGTGACCCCGTCCTCCGTCCGCCGCTCCTCCCGCCTCCTCGAG 300
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACGCCGACCAAGGTAACTTCCGAGACCCCCGTGAAGCCCACCCCAACCCCGAAGCGGAAC 360
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GCGCCGCGCCGTCGCCGTCGCCGAAGACGCCGACCCAGTCCGAGCCCAAGCGGCAGCGGC 420
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGAGGCAGAGGCAGCAGCCGAAGAAGCCGAAGAAGAGGGCGTACTACCGGAAGGTGGTGT 480
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACGACGGCGGGGAGTTCGCCGCCGGGGACGACGTGTACGTGAAGCGGCGGGATGGCGCGG 540
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGTCCGACGCGGAAGACCCGGAGGCGGAGGAGTGCCGCGTGTGCTTCCGCGCCGGCGCCG 600
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      CGGTGATGGTGGAGTGCGACGTGTGCCTCGGCGGGTTCCACCTGCGGTGCGTGCGCCCGC 660
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      CGCTGCGGCGCGTGCCGGAGGGGGACTGGGCGTGCCCCTACTGCGAGGCCGAGCGCGCGG 720
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GGAAGGCCATCGAGAGGCCCAAGCCGCCGGAGGGGAAGCGCATCGTGAGGACCGCCAAAG 780
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGAAGCTTCTCTCCAGTGATTTGTGGGCTGCACGAATCGAGAGTTTATGGAGGGAGCCAG 840
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATGGAATATTCTGGGCAAAGGTAAGATGGTATATTATCCCTGAAGAGACTGCAGCAGGAA 900
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GGCAGCCACATAATTTGCGTAGGGAGCTGTACCGCACCAATGATCTTGCAGACATTGAGA 960
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TGGAAACAATTCTTAGACATTGTTATGTCATGAGCCCCAAAGAATTTAAGGATGCTAGTG 1020
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATCAAGGAGATGACGTATTCTACTGTGAATATGAATATGACATACACTGGCATAATTTTA 1080
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGCGTCTGGCAGACATCGATGATGAACCTGAGACAAAGGAAGATCCTGGCGACGAGCCAT 1140
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACAATGCTGGTAATGATTATGTCAGTGACTCGGATGAAGATTCTGAATATGATGAGGAGG 1200
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AAGAACCTACTAAATGTAGTTCTGCTAGAACACATCAATCACATGCGTTGGCTGCGAATC 1260
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TGCGGAAAGGGAGGACATATGGCCTACAAAAAATTGGGATCCGTAAAATTCCTGAACATG 1320
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TCCGGTGTCATCAAAAGACCAATCTGGAGAAGGCAAAAGCAACCCTGTTATTGGCAAATC 1380
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TTCCTAAGTCGTTACCTTGTAGGGATAAAGAAATGGAGGAGATATCTGCATTTGTGAAGG 1440
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATGCAATTTGCAATGATCAATGTATAGGACGCTGCCTTTATATTCATGGTGTACCAGGCA 1500
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      CTGGCAAGACTATGAGTGTACTTGCAGTTATGAGGAGGCTAAGATCCGAGCTTGATTCTG 1560
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GGAATCTGAGGCCTTATTCTTTCATAGAGATTAATGGTCTTAAATTAGCTTCTCCAGAGA 1620
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATATCTACAAGGTTATATATGAACAGTTGAGTGGGCATAGGGTAGGGTGGAAAAAAGCCC 1680
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TTCATTATTTAACCGAGCACTTTTCAGGTGGCACTAAAATTGGCAAACAAGCAAACCAGC 1740
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      CAATTATTTTGCTCATCGATGAGCTTGATCTTCTTTTGACGAGAAATCAGTCGGTGCTGT 1800
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATAACATTCTTGACTGGCCCACCAGGCCAAATTCAAACCTAGTTGTCATAGGTATAGCGA 1860
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACACAATGGATCTTCCTGAAAAGTTATTGCTTCGTATTTCAAGTCGGATGGGTATCCAAC 1920
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GACTGTGTTTTGGCCCATATAATTATCGGCAACTGCAGGAGATCATTACAAGCCGTTTAA 1980
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGGGCATTGATGCCTTTGAAGACCAAGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCTA 2040
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      TGTCTGGTGATGCAAGGCGAGCCTTAGAAATATGTAGACGTGCAGCAGAGTTTGCAGATT 2100
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACCGCGTTAAACAATCTGGGCACACTTCTGTGAATAGAGGAAAAAATGTTGTTTGCATGG 2160
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GTGACATAGAAGCTGCTATTCAGGAAGTCTTTCAGGCACCACATATTCAAGTAATGAAGA 2220
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACTGCCCAAAATTTGGAAAGATTATATTGGTCGCTATGGTTCATGAATTATACAGAAGTG 2280
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GGCTAGGTGAAGTGATGTTCGATAAGCTGGCAGCAACTGTCCTCTCTTGGTGCCATGTCA 2340
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ACAGAGAATTATTGCCTGGCTATGATAATCTTCTGAAAATCTGTTGCAAGCTTGGTGAAG 2400
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      GTAAGATAATTTTCTGCGAGGAAGGCACTAAGCACAAGTTGCAGAAGCTTCAGCTTAACT 2460
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      ATCCAAGTGACGATGTAACTTTTGCCCTGAAGGAATCCCCAGATATTCCATGGTTGTCCA 2520
consensus_7937#1      ------------------------------------------------------------
                                                                                  

consensus_7937#0      AGTACCTGTGAAGTTTACACTTGCAGCGGTTGTACTTTCCCAGCATTTCATTCATCTACT 2580
consensus_7937#1      -------------------------------------------------------CTACT 5
                                                                             *****

consensus_7937#0      CCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTT 2640
consensus_7937#1      CCTGGAGTTGGAGAGCAACGATCGCAACTACTTGCCCTTGATCAGCAAATCTCGGAATTT 65
                      ************************************************************

consensus_7937#0      ATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAA 2700
consensus_7937#1      ATGTGGGTCCAATTGTTCATCTTCCAAAAGATATCGACTCGAAGGATGCCGCTGCAACAA 125
                      ************************************************************

consensus_7937#0      AATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAG 2760
consensus_7937#1      AATGTAAATGCAGTGTCGCACCAGGACTGTAACATATGTATGATTCGAAGGAGATTGTAG 185
                      ************************************************************

consensus_7937#0      GTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAAAAAAAAAAAAA-------- 2812
consensus_7937#1      GTCGCCATTTTATTTTCGCCAATCTGTTGTTACCCAAGAAACTTTGCTCTGGCAGTGTTG 245
                      *****************************************


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)