cluster # 7939

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Oryza sativa
cluster # 7939 cluster # 7939 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7939#0 length = 2358 sequences # 5
consensusID : consensus_7939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2358
fasta sequence
                              [GCGGCTGCGCTTCCGGCTTAAACCCTAGCTCTATGGCCGCCGCCGCCGCCGCCTCCTCCATGGCGAAGCGCAAGCAACGCAAGGCGGCGACGGAGCAGGAGGTAGAGAACCACGACGAGGCCACTGTCGCCGCGGAGGCGGGGCCCGAGAATGACGGGCACACGGCGCACGCCGCCGAAGAGGCTGCGGCCGCTGAGGAGGGTGTCGAGCGCGAAGGAGGAGGCGAGGGCGGCGCGGAGGGGGAGGAGGGCCCGGACGCTGCAGCCAGGGGAGGTGAGGAGGGCAAGGAAGAGGAGGAGAGGGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTGAGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTGGAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTTCTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCTCCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCATCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATGTCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCTGCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCACTATCAATGATGATTCTAGACGAGGCTGACCTCCTCCTATCCTATCGTTGTGAAGATGACATAAAAGCTCTCGTTCCACATATCCCAAGAAGCTGCCAGTCCATCCTGATGTCTGCAACGTCAAGCGCTGATATTGAGAAACTGACTAAGCTACTTCTGCACAACCCTTTTATTCTGACCCTTACGGAGGTTGGTCATGCGAAGGATGATTTGATCCCAAAAAATGTGCAGCAGTTTTGGATATCATGTGATGCTAAGGATAAGATGCTTTATATCCTTGTACTCCTGAAGTTGGAGCTTATTCAGAAGAAAGTTCTCATATTTGTAAACTCAATTGACTCGGCATTCAAATTAAGGCTGTTTCTGGAGAAGTTTGGGATAAGATCTTCAGTGCTAAATGCTGAATTACCACAAAATTCACGCCTCCATATCATTCAGGCATTCAATGCTAGGCTATTTGATTATCTGATAGCAACGGATGACAATAAGTCTAAAGAGGAGAGGCAAGCCAATAAGGGAAACAAAAAGGATTCTAGGGTGTCACGCAAGCAGTTGCAGCAAACTTTAGATGCTGAATTCGGTGTTGTCAGAGGAATTGACTTCAAAAATGTATTCACGGTAGTTAATTATGACATGCCTCCAGATCCTGCTGGGTATGTTCACAGAGTAGGAAGGACAGGGAGAGCAAATAAAACTGGTGCATCCATATCGCTTGTTTCACCAAAGGAGAATGGCATTTTTGAAGATATTGAAAATATGTTGAAAGATGTTGAAAATAGAGACACCAGTTGCATTTCACCTTTCCCATTACTTACAAAAAATGCCGTTGAGTCTTTACGCTATAGAGCTCAGGATGTTGCCAGGAGTGTGACAACCCGTGATATAAAAGAAGCACGTCGCCAAGACATAAAGAATGAAATCCTCAACTCTGAGAAGTTGAAGGCTCATTTTGATGAGAATCCGAGAGACCTTGATTTGCTCAAACATGATAAGTTATTGAGCAACAAGGAAAT-CCCTGCACACCTACGTGATGT-CCCTGAGTACCTTATTGATCCCACAACAAAAGAAGCAAGCAATGTAGTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCCACGGAGGAGGAAAAGAATGGGATTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAATCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAGGTGGAAAGCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTCTGGTATCTCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGCTTTACTGAATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGAGAGTTTGTTTAGTTTCAGTTCTTCTAGAGGACGTGCATATTGCCATTCCTCTATTTATTCGAGGAATATCAGCAGAAAACTATGTTTCAAGATTTTTGTTGTATAAAAAATTGCATAAAAAGGTGATGTTTTCAGGTTAACAAAAAA]

[+] EMBL AK068068             [GCGGCTGCGCTTCCGGCTTAAACCCTAGCTCTATGGCCGCCGCCGCCGCCGCCTCCTCCATGGCGAAGCGCAAGCAACGCAAGGCGGCGACGGAGCAGGAGGTAGAGAACCACGACGAGGCCACTGTCGCCGCGGAGGCGGGGCCCGAGAATGACGGGCACACGGCGCACGCCGCCGAAGAGGCTGCGGCCGCTGAGGAGGGTGTCGAGCGCGAAGGAGGAGGCGAGGGCGGCGCGGAGGGGGAGGAGGGCCCGGACGCTGCAGCCAGGGGAGGTGAGGAGGGCAAGGAAGAGGAGGAGAGGGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTGAGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTGGAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTTCTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCTCCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCATCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATGTCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCTGCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCACTATCAATGATGATTCTAGACGAGGCTGACCTCCTCCTATCCTATCGTTGTGAAGATGACATAAAAGCTCTCGTTCCACATATCCCAAGAAGCTGCCAGTCCATCCTGATGTCTGCAACGTCAAGCGCTGATATTGAGAAACTGACTAAGCTACTTCTGCACAACCCTTTTATTCTGACCCTTACGGAGGTTGGTCATGCGAAGGATGATTTGATCCCAAAAAATGTGCAGCAGTTTTGGATATCATGTGATGCTAAGGATAAGATGCTTTATATCCTTGTACTCCTGAAGTTGGAGCTTATTCAGAAGAAAGTTCTCATATTTGTAAACTCAATTGACTCGGCATTCAAATTAAGGCTGTTTCTGGAGAAGTTTGGGATAAGATCTTCAGTGCTAAATGCTGAATTACCACAAAATTCACGCCTCCATATCATTCAGGCATTCAATGCTAGGCTATTTGATTATCTGATAGCAACGGATGACAATAAGTCTAAAGAGGAGAGGCAAGCCAATAAGGGAAACAAAAAGGATTCTAGGGTGTCACGCAAGCAGTTGCAGCAAACTTTAGATGCTGAATTCGGTGTTGTCAGAGGAATTGACTTCAAAAATGTATTCACGGTAGTTAATTATGACATGCCTCCAGATCCTGCTGGGTATGTTCACAGAGTAGGAAGGACAGGGAGAGCAAATAAAACTGGTGCATCCATATCGCTTGTTTCACCAAAGGAGAATGGCATTTTTGAAGATATTGAAAATATGTTGAAAGATGTTGAAAATAGAGACACCAGTTGCATTTCACCTTTCCCATTACTTACAAAAAATGCCGTTGAGTCTTTACGCTATAGAGCTCAGGATGTTGCCAGGAGTGTGACAACCCGTGATATAAAAGAAGCACGTCGCCAAGACATAAAGAATGAAATCCTCAACTCTGAGAAGTTGAAGGCTCATTTTGATGAGAATCCGAGAGACCTTGATTTGCTCAAACATGATAAGTTATTGAGCAACAAGGAAAT CCCTGCACACCTACGTGATGT CCCTGAGTACCTTATTGATCCCACAACAAAAGAAGCAAGCAATGTAGTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCCACGGAGGAGGAAAAGAATGGGATTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAATCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAGGTGGAAAGCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTCTGGTATCTCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGCTTTACTGGATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGA                                                                                                                                                   ]
[+] EMBL CF304090             [                                                                                                                                                                                                                                                                                                             GGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTGAGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTGGAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTTCTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCTCCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCATCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATGTCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCTGCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCACTATCAATGATGATTCTAGACGAGGCTGACCTCCTCCTATCCTATCGTTGTGAAGATGACATAAAAGCTCTCGTTCCACATATCCCAAGAAGCTGCCAGTCCATCCTGATGTCTGCAACGTCAAGCGCTGATATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF304843             [                                                                                                                                                                                                                                                                                                             GGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTGAGGAAGAAGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTGGAAGGGAAGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTTCTCCCTATGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCTCCAAATGTTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCATCATCTCTCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATGTCAGACAAAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCTGCTTGTGTTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCACTATCAATGATGATTCTAGACGAGGCTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK121524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGAGTAGGAAGGACAGGGAGAGCAAATAAAACTGGTGCATCCATATCGCTTGTTTCACCAAAGGAGAATGGCATTTTTGAAGATATTGAAAATATGTTGAAAGATGTTGAAAATAGAGACACCAGTTGCATTTCACCTTTCCCATTACTTACAAAAAATGCCGTTGAGTCTTTACGCTATAGAGCTCAGGATGTTGCCAGGAGTGTGACAACCCGTGATATAAAAGAAGCACGTCGCCAAGACATAAAGAATGAAATCCTCAACTCTGAGAAGTTGAAGGCTCATTTTGATGAGAATCCGAGAGACCTTGATTTGCTCAAACATGATAAGTTATTGAGCAACAAGGAAAT CCCTGCACACCTACGTGATGT CCCTGAGTACCTTATTGATCCCACAACAAAAGAAGCAAGCAATGTAGTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCCACGGAGGAGGAAAAGAATGGGATTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAATCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAGGTGGAAAGCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTCTGGTATCTCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGCTTTACTGAATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGAGAGTTTGTTTAGTTTCAGTTCTTCTAGAGGACGTGCATATTGCCATTCCTCTATTTATTCGAG                                                                                    ]
[+] EMBL BI805301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATAAGTTATTGAGC ACAAGGAAATCCCCTGCACACCTACGTGATGTCCCCTGAGTACCTTATTGATCCC C AC AAAGAAGCAAGCAATGTAGTCAAACTTTCAAGGGCTGCTATGGATATCGATAAGCC CGGAGGAGGAAAAGAATGGGATTCAAGGGAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAATCACGGAGGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAGGTGGAAAGCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTCTGGTATCTCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGCTTTACTGAATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGAGAGTTTGTTTAGTTTCAGTTCTTCTAGAGGACGTGCATATTGCCATTCCTCTATTTATTCGAGGAATATCAGCAGAAAACTATGTTTCAAGATTTTTGTTGTATAAAAAATTGCATAAAAAGGTGATGTTTTCAGGTTAACAAAAAA]




>consensus_7939#0
GCGGCTGCGCTTCCGGCTTAAACCCTAGCTCTATGGCCGCCGCCGCCGCCGCCTCCTCCA
TGGCGAAGCGCAAGCAACGCAAGGCGGCGACGGAGCAGGAGGTAGAGAACCACGACGAGG
CCACTGTCGCCGCGGAGGCGGGGCCCGAGAATGACGGGCACACGGCGCACGCCGCCGAAG
AGGCTGCGGCCGCTGAGGAGGGTGTCGAGCGCGAAGGAGGAGGCGAGGGCGGCGCGGAGG
GGGAGGAGGGCCCGGACGCTGCAGCCAGGGGAGGTGAGGAGGGCAAGGAAGAGGAGGAGA
GGGAGGTGAGCTTTGACGAGCTTGGCTTGGACGAGCAACTGAAGAGGGCTTTGAGGAAGA
AGGGCTTGGACAAGGCCACCCCGATCCAGAGAGAGGCCATCCCGCTCATCCTGGAAGGGA
AGGATGTGGTCGCTAAGGCCAAGACTGGCTCCGGAAAGACCTTTGCTTACCTTCTCCCTA
TGCTGCATGAGCTATTGAAGTTGTCTGCAGAAGGGCGTATCCGAAAATCTGCTCCAAATG
TTTTCATCCTTGTGCCAACTCGCGAGTTATGCCAGCAGGTTCATAATGAGGCATCATCTC
TCCTTGAATTCTGTACATCCAAATTGAAGGTTGTGCAAGTGAATGCGAGCATGTCAGACA
AAGATATTAAAGTTGCATTGTCTGGCCCCCCTAATATACTTGTTACAACTCCTGCTTGTG
TTGCATCATGCATATCAAAGGGCATTATCCGTGGATCATCTATCAAAGAATCACTATCAA
TGATGATTCTAGACGAGGCTGACCTCCTCCTATCCTATCGTTGTGAAGATGACATAAAAG
CTCTCGTTCCACATATCCCAAGAAGCTGCCAGTCCATCCTGATGTCTGCAACGTCAAGCG
CTGATATTGAGAAACTGACTAAGCTACTTCTGCACAACCCTTTTATTCTGACCCTTACGG
AGGTTGGTCATGCGAAGGATGATTTGATCCCAAAAAATGTGCAGCAGTTTTGGATATCAT
GTGATGCTAAGGATAAGATGCTTTATATCCTTGTACTCCTGAAGTTGGAGCTTATTCAGA
AGAAAGTTCTCATATTTGTAAACTCAATTGACTCGGCATTCAAATTAAGGCTGTTTCTGG
AGAAGTTTGGGATAAGATCTTCAGTGCTAAATGCTGAATTACCACAAAATTCACGCCTCC
ATATCATTCAGGCATTCAATGCTAGGCTATTTGATTATCTGATAGCAACGGATGACAATA
AGTCTAAAGAGGAGAGGCAAGCCAATAAGGGAAACAAAAAGGATTCTAGGGTGTCACGCA
AGCAGTTGCAGCAAACTTTAGATGCTGAATTCGGTGTTGTCAGAGGAATTGACTTCAAAA
ATGTATTCACGGTAGTTAATTATGACATGCCTCCAGATCCTGCTGGGTATGTTCACAGAG
TAGGAAGGACAGGGAGAGCAAATAAAACTGGTGCATCCATATCGCTTGTTTCACCAAAGG
AGAATGGCATTTTTGAAGATATTGAAAATATGTTGAAAGATGTTGAAAATAGAGACACCA
GTTGCATTTCACCTTTCCCATTACTTACAAAAAATGCCGTTGAGTCTTTACGCTATAGAG
CTCAGGATGTTGCCAGGAGTGTGACAACCCGTGATATAAAAGAAGCACGTCGCCAAGACA
TAAAGAATGAAATCCTCAACTCTGAGAAGTTGAAGGCTCATTTTGATGAGAATCCGAGAG
ACCTTGATTTGCTCAAACATGATAAGTTATTGAGCAACAAGGAAATCCCTGCACACCTAC
GTGATGTCCCTGAGTACCTTATTGATCCCACAACAAAAGAAGCAAGCAATGTAGTCAAAC
TTTCAAGGGCTGCTATGGATATCGATAAGCCACGGAGGAGGAAAAGAATGGGATTCAAGG
GAGGATCTGGCAGAAGTAGTGATCCCCTTAAGACTTTCTCTGCTGAGGGGAAATCACGGA
GGCGAGGGAGGAAGGAAAGAGACGGAGAACAGGATAGAAGAAAGAGGAAGAAGGTGGAAA
GCTAATCTTTTGTGAAGCGTTCACTGCCAAGTGCGCACAGTTTTGTAGGTTTCTGGTATC
TCGTCCTGTAACTTTGTAGCATCTCCAGATATAGGGGGATAACAATGTCAAGCTTTACTG
AATGCTGCGTGTGCTATGCTATGCACACCATTATATAGACAGACGAGTAGAGAGTTTGTT
TAGTTTCAGTTCTTCTAGAGGACGTGCATATTGCCATTCCTCTATTTATTCGAGGAATAT
CAGCAGAAAACTATGTTTCAAGATTTTTGTTGTATAAAAAATTGCATAAAAAGGTGATGT
TTTCAGGTTAACAAAAAA
clustalw multiple alignements is not computed in this case