cluster # 7946

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Oryza sativa
cluster # 7946 cluster # 7946 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7946#0 length = 671 sequences # 5
consensusID : consensus_7946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 671
fasta sequence
                              [ATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG-CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG-CCGCAGCGACACAGGTGCCCCCCA-CCGAAGCAGAGTCCGTAGAAG-CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA-CGTTGCCCTCAGCCTCCCGCAAGCTGATGG-CCGTTAGTGA-CGTG-CCGCTAG-CGCCGGTGTG-CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC-TGGGAAAGAAGTG-CAAGACGACAGGGGTGAAGGTGTGCTGTG-AGGCGTTC-AAGACATTCGCATG-CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAAAAGGTTTATTAAAAA]

[+] EMBL AK121460             [ATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCGCTAG CGCCGGTGTG CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACGACAGGGGTGAAGGTGTGCTGTG AGGCGTTC AAGACATTCGCATG CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAA               ]
[+] EMBL BE229877             [        CTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGGCCCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCGCCCGCAGCGACACAGGTGCCCCCCACCCGAAGCAGAGTCCGTAGAAGCCGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACACCGTTGCCCTCAGCCTCCCGCAAGCTGATGGCCCGTTAGTGACCGTGCCCGCTAGCCGCCGGTGTGCCCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACG                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU163719             [                  TAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCG TAG CGCCGGTGTG CCC GTGCGGTTCGACAAGATGAAGGGG CCG CATCGAACTTGGGAAAG ANT  CAAGACGNCAAGGGTGAA GTGT CTTTT AAGCG TC AAG CATTCGCATG  CCGCACAACAANCTGATC ATGACGT                                                                                                                                                                                                                                                                                           ]
[+] EMBL C73457               [                         GCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCGCTAG CGCCGGTGTG CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACGACAGGGGTGAAGGTGTGCTGTG AGGCGTTC AAGACATTCGCATG CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACAACATNCACAACTAC                                                                                                                                                                                                                                             ]
[+] EMBL C99126               [                                                                                                                                                                                                                                                                                                                       aAAAG ANTGCCAAGACGACAGGGGTGAAGGTGTGCTGTGAAGGCGTTCAAAGACATTCGCATGCCCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACA CTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAACCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAAAAGGTTTATTAAAAA]




>consensus_7946#0
ATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTT
CCATCGGCCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCGCCGCAG
CGACACAGGTGCCCCCCACCGAAGCAGAGTCCGTAGAAGCGGCAGAGCTTGCGTCCTCTG
CCTTCAAGGCCGACACGTTGCCCTCAGCCTCCCGCAAGCTGATGGCCGTTAGTGACGTGC
CGCTAGCGCCGGTGTGCCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGCTGG
GAAAGAAGTGCAAGACGACAGGGGTGAAGGTGTGCTGTGAGGCGTTCAAGACATTCGCAT
GCCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACA
CCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGAC
CGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCT
CCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGT
CATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAAAAGG
TTTATTAAAAA
clustalw multiple alignements is not computed in this case