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Oryza sativa
cluster # 7957 cluster # 7957       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7957#0 length = 802 sequences # 5  

consensusID : consensus_7957#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 802
fasta sequence
                              [GTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTA-CCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACG-AAGGGGA-TTGCCCCGATTTCCTCGT-CCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTT-GGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGTTCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTATCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCAAAAAAAATATGACGCATTCAGAAGTGTTGTGACTTGTCAAGACACAGTAATGGGATTTGGTGAGAGATCGAATGAGCACATTGGAATTAGGCTGTTAAAAAAAAA]

[+] EMBL AU068795             [GTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTA CCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACG AAGGGGA TTGCCCCGATTTC                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C26971               [GTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCGCCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCCCACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATCCCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACATCGTGGACAAGGGCACCTGCCCATGNCTCGCGAGCGGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU058193             [                                                                                                                                                                                                                                                                    CCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCGCGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTA CCGGTCCAAGATGAGGGCTCAGTTCGACCTGGACG AAGGGGA TTGCCCCGATTTCCTCGT CCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTT GGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCG ACNCG AATTGTGC CTTTTGTGTc                                                                                                                                                                                                         ]
[+] EMBL AU166157             [                                                                                                                                                                                                                                                                       TGCTTCGCGACCGGGACCGNTTACGCGCTCNTCTGCGCTTCGGGAATGGGGTNCCTGTACTCGTGCTTCTACCCGNTCCAAGATGAGGGCTCAGTTCGACCTGGACGAAAGGGGATTTGCCCCGATTTCCTCGTCCCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGGATCGGTTGGGCTGCCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGTTCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTATCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCAAAAAAA                                                                                                   ]
[+] EMBL AU068794             [                                                                                                                                                                                                                                                                                                                                    CGTGCTTCTA CCGGTCCAAGATNAGGGCTCAGTTCGACCTGGACG AAGGGGA TTGCCCCGATTTCCTCGT CCATTTCTGCTGCGAGTACTGCGCGCTGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTT GGGGATCGGTTGGGCTNCCAATGTGGACAGGCAGAGNCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCGTCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGTTCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTATCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCATGTAATATATGACGCATTCAGAAGTGTTGTGACTTGTCAAGACACAGTAATGGGATTTGGTGAGAGATCGAATGAGCACATTGGAATTAGGCTGTTAAAAAAAAA]


>consensus_7957#0 GTCTGTATTCCCAAGCAATGTATCCCTCCGCCCCTCCCGACGCGTATAACAAGTACAGCG CCGGTGCTCCACCGACGGCGCCGCCGCCGGCAACGTACCAGCTGCCGACGATGAACACCC CACGCACCGGCGGCGGGCTGACGCGATGGTCCACCGGCCTTTTCCACTGCATGGACGATC CCGGAAACTGTCTCATCACATGCGTGTGCCCCTGCATCACCTTTGGGCAGGTCGCTGACA TCGTGGACAAGGGCACCTGCCCATGCCTCGCGAGCGGGACGGCTTACGCGCTCCTCTGCG CGTCGGGGATGGGGTGCCTGTACTCGTGCTTCTACCGGTCCAAGATGAGGGCTCAGTTCG ACCTGGACGAAGGGGATTGCCCCGATTTCCTCGTCCATTTCTGCTGCGAGTACTGCGCGC TGTGCCAGGAGTACCGGGAGCTCAAGAACCGCGGCTTCGACTTGGGGATCGGTTGGGCTG CCAATGTGGACAGGCAGAGGCGAGGCGTCACCGGAGCGTCGGTGATGGGAGCTCCTGGCG TCCCGGTCGGCATGATGAGGTAGACGAAGATGGCGAACGCGAAATGGTGCGCTTTTGTGT TCTTGTGTTGCAATATGTTCTCTGTGGTTTTCATTTGGAGATCACTGCCTATTTCATGTA TCGTATACTCCTATTTAGCTTGATTTGTTGGGTTTCAAAAAAAATATGACGCATTCAGAA GTGTTGTGACTTGTCAAGACACAGTAATGGGATTTGGTGAGAGATCGAATGAGCACATTG GAATTAGGCTGTTAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)