cluster # 7965

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Oryza sativa
cluster # 7965 cluster # 7965 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7965#0 length = 1205 sequences # 5
consensusID : consensus_7965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1205
fasta sequence
                              [CATCTGCCAAGATCCCGCGAAACCCGCCGCTCCCCGCGCCGCCGCCCGCCGGCCGGCAATCCCACCACAGCCCAGTCCCAGATTCCCAGCATCCCCGCGCCTCGATTCGAGCTCGGGACTCGCGAGGAGCCCGCGGGATTCGAGCACGATTGATTTCCCTTGGGGGAAGCCGGATGATGGTGGGGTTCATGGGGAAGAGGAAGGAGCTGGACCAGGTGGTGGACGGCCTCTCCGACTTCTCCCTCTCCGGCCCCGCCGCCAAGAGCCGCAGATTGGATATTGGGCTTCCACCTATTATGGAAGAAGAGACGCCAGGTCCTTCCATGCCATTTGGACATGAGATGCTAGGAGAGGAAATCCACAGTGTTGTTAGCATGCCCATTATAGAAGACATGCTGGGAGGTGCCATGGAATCTCATCCATCAAGTGAGGAC-AGGCACTTGTTTTATACAAGTCAGTAGATAACACTGCATGCATTGGTCCTGGGACCTCGAACCCTTCAATCATAATCAGTCCAGACTTGATACGTAGTCTAAAGAATCAGGCTTTTATGCAAAGGAACTTTCACGGGCTGGAGGACAAATCTCCTGGGTGCAGCAACTTCTTGGCTTTAGTTCCTTGGACACCACCACAAATTGCCACGGTATCTAATTGGTCTGCTTCAGATTCAGAAAAGAGAGAATTCTTCGAAGTGCCAATGGAGTCTGATGAGACAGAAGTCGATTCTATGGACGTTGAGGAATCTCCGGAAGCAAATGTCGCAGCAATCGATGGCGAAAGCCTTCACCAGTGGCAACAACACTGCATGACCCCATCGTCGCTACCAAACCCTTCAGCACCTGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAA-TTGA-CTGCTGCTGT-TTAC-TTACAGGAAGGATGAAGAAATCC-TCCA-GTTA-GTTAGCATCCACGA-CTAGTA-CCTCAAA-TGGCTG-CCATGTGGTGCATAGT-GCTGATCAT-TAGATCAATTGGTAAAATGATTGTTATGT-GCATAGTAGC-TCCCTCT-AGCATAGTGCT-GATCTTGC-CCATTCAGTGTTTC-AGT-GTACACCTAGAAATAGT-CCT-GATCTTGCCCATTATTAGTG-TTTTAGTAGAGAGTGTACACTGTTGTTGTTACAAAAAACACAAGCCTGTATGTTGGCATCCAATTAATTTATCTAGCATTCTTGGATTTAAAAA]

[+] EMBL AK099428             [CATCTGCCAAGATCCCGCGAAACCCGCCGCTCCCCGCGCCGCCGCCCGCCGGCCGGCAATCCCACCACAGCCCAGTCCCAGATTCCCAGCATCCCCGCGCCTCGATTCGAGCTCGGGACTCGCGAGGAGCCCGCGGGATTCGAGCACGATTGATTTCCCTTGGGGGAAGCCGGATGATGGTGGGGTTCATGGGGAAGAGGAAGGAGCTGGACCAGGTGGTGGACGGCCTCTCCGACTTCTCCCTCTCCGGCCCCGCCGCCAAGAGCCGCAGATTGGATATTGGGCTTCCACCTATTATGGAAGAAGAGACGCCAGGTCCTTCCATGCCATTTGGACATGAGATGCTAGGAGAGGAAATCCACAGTGTTGTTAGCATGCCCATTATAGAAGACATGCTGGGAGGTGCCATGGAATCTCATCCATCAAGTGAGGAC AGGCACTTGTTTTATACAAGTCAGTAGATAACACTGCATGCATTGGTCCTGGGACCTCGAACCCTTCAATCATAATCAGTCCAGACTTGATACGTAGTCTAAAGAATCAGGCTTTTATGCAAAGGAACTTTCACGGGCTGGAGGACAAATCTCCTGGGTGCAGCAACTTCTTGGCTTTAGTTCCTTGGACACCACCACAAATTGCCACGGTATCTAATTGGTCTGCTTCAGATTCAGAAAAGAGAGAATTCTTCGAAGTGCCAATGGAGTCTGATGAGACAGAAGTCGATTCTATGGACGTTGAGGAATCTCCGGAAGCAAATGTCGCAGCAATCGATGGCGAAAGCCTTCACCAGTGGCAACAACACTGCATGACCCCATCGTCGCTACCAAACCCTTCAGCACCTGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAA TTGA CTGCTGCTGT TTAC TTACAGGAAGGATGAAGAAATCC TCCA GTTA GTTAGCATCCACGA CTAGTA CCTCAAA TGGCTG CCATGTGGTGCATAGT GCTGATCAT TAGATCAATTGGTAAAATGATTGTTATGT GCATAGTAGC TCCCTCT AGCATAGTGCT GATCTTGC CCATTCAGTGTTTC AGT GTACACCTAGAAATAGT CCT GATCTTGCCCATTATTAGTG TTTTAGTAGAGAGTGTACACTGTTGTTGTTACAAAAAACACAAGCCTGTATGTTGGCATCCAATTAATTTATCTAGC                 ]
[+] EMBL CF297616             [CATCTGCCAAGATCCCGCGAAACCCGCCGCTCCCCGCGCCGCCGCCCGCCGGCCGGCAATCCCACCACAGCCCAGTCCCAGATTCCCAGCATCCCCGCGCCTCGATTCGAGCTCGGGACTCGCGAGGAGCCCGCGGGATTCGAGCACGATTGATTTCCCTTGGGGGAAGCCGGATGATGGTGGGGTTCATGGGGAAGAGGAAGGAGCTGGACCAGGTGGTGGACGGCCTCTCCGACTTCTCCCTCTCCGGCCCCGCCGCCAAGAGCCGCAGATTGGATATTGGGCTTCCACCTATTATGGAAGAAGAGACGCCAGGTCCTTCCATGCCATTTGGACATGAGATGCTAGGAGAGGAAATCCACAGTGTTGTTAGCATGCCCATTATAGAAGACATGCTGGGAGGTGCCATGGAATCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA766997             [                                                                                                                                                                                                                                                                                                                  AGACTCCAGGTCCTTCCATGCCATTTGGACATGAGATGCTAGGAGAGGAAATCCACAGTGTTGTTAGCATGCCCATTATAGAAGACATGCTGGGAGGTGCCATGGAATCTCATCCATCAAGTGAGGACAAGGCACTTGTTTTATACAAGTCAGTAGATAACACTGCATGCATTGGTCCTGGGACCTCGAACCCTTCAATCATAATCAGTCCAGACTTGATACGTAGTCTAAAGAATCAGGCTTTTATGCAAAGGAACTTTCACGGGCTGGAGGACAAATCTCCTGGGTGCAGCAACTTCTTGGCTTTAGTTCCTTGGACACCACCACAAATTGCCACGGTATCTAATTGGTCTGCTTCAGATTCAGAAAAGAGAGAATTCTTCGAAGTGCCAATGGAGTCTGATGAGACAGAAGTCGATTCTATGGACGTTGAGGAATCTCCGGAAGCAAATGTCGCAGCAATCGATGGCGAAAGCCTTCACCAGTGGCAACAACACTGCATGACCCCATCGTCGCTACCAAACCCTTCAGCACCTGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAA TTGA CTGCTGCTGN TTAC TTACAGGAAGGATGAAGAAATCC TNCA GNTA GTTAGCATNCACGA CTAGTACCCTCAAA TGGCTG CCATGTGGNGCATAGN GCTGATCAT TAAATCAATTGGTAAAATGATTGGTATGT GCATAGTAACTTCCCTCT ANCATAGNGCT GATCTTGN CCATTCAGNGGTTC AGG GNACACCTAAAAAAAGT CCT GATCNTGn                                                                                                           ]
[-] EMBL CB966149             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAATGGAGTCTGATGAGACAGAAGTCGATTCTATGGACGTTGAGGAATCTCCGGAAGCAAATGTCGCAGCAATCGATGGCGAAAGCCTTCACCAGTGGCAACAACACTGCATGACCCCATCGTCGCTACCAAACCCTTCAGCACCTGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAA TTGA CTGCTGCTGT TTAC TTACAGGAAGGATGAAGAAATCC TCCA GTTA GTTAGCATCCACGA CTAGTA CCTCAAA TGGCTG CCATGTGGTGCATAGT GCTGATCAT TAGATCCATTGGTAAAATGATTGTTATGT GCATAGTAGC TCCCTCT AGCATAGTGCT GATCTTGC CCATTCAGTGTTTC AGT GTACACCTAGAAATAGT CCT GATCTTGCCCATTATTAGTGATTTTAGTAGAGAGTGTACACTGATGTTGTTACTAAAAACACAAGCCTGTATGTTGGCATCCAATTAATTTATCTAGCATTCTTGGATT      ]
[+] EMBL BI797844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCAGCACCTGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAAGTTGAGCTGCTGCTGTGTTACGTTACAGGAAGGATGAAGAAATCCGTCCAGGTTAGGTTAGCATCCACGAGCTAGTA CCTCAAAGTGGCTGCCCATGTGGTGCATAGTGGCTGATCATGTAGATCAATTGGTAAAATGATTGTTATGTGGCATAGTAGC TCCCTCTGAGCATAGTGCTGGATCTTGCACCATTCAGTGTTTCAAGTGGTACACCTAGAAATAGTGCCTGGATCTTGCCCATTATTAGTG TTTTAGTAGAGAGTGTACACTGTTGTTGTTACAAAAAACACAAGCCTGTATGTTGGCATCC ATTAATTTATCTAGCATT TTGGATTTAAAAA]




>consensus_7965#0
CATCTGCCAAGATCCCGCGAAACCCGCCGCTCCCCGCGCCGCCGCCCGCCGGCCGGCAAT
CCCACCACAGCCCAGTCCCAGATTCCCAGCATCCCCGCGCCTCGATTCGAGCTCGGGACT
CGCGAGGAGCCCGCGGGATTCGAGCACGATTGATTTCCCTTGGGGGAAGCCGGATGATGG
TGGGGTTCATGGGGAAGAGGAAGGAGCTGGACCAGGTGGTGGACGGCCTCTCCGACTTCT
CCCTCTCCGGCCCCGCCGCCAAGAGCCGCAGATTGGATATTGGGCTTCCACCTATTATGG
AAGAAGAGACGCCAGGTCCTTCCATGCCATTTGGACATGAGATGCTAGGAGAGGAAATCC
ACAGTGTTGTTAGCATGCCCATTATAGAAGACATGCTGGGAGGTGCCATGGAATCTCATC
CATCAAGTGAGGACAGGCACTTGTTTTATACAAGTCAGTAGATAACACTGCATGCATTGG
TCCTGGGACCTCGAACCCTTCAATCATAATCAGTCCAGACTTGATACGTAGTCTAAAGAA
TCAGGCTTTTATGCAAAGGAACTTTCACGGGCTGGAGGACAAATCTCCTGGGTGCAGCAA
CTTCTTGGCTTTAGTTCCTTGGACACCACCACAAATTGCCACGGTATCTAATTGGTCTGC
TTCAGATTCAGAAAAGAGAGAATTCTTCGAAGTGCCAATGGAGTCTGATGAGACAGAAGT
CGATTCTATGGACGTTGAGGAATCTCCGGAAGCAAATGTCGCAGCAATCGATGGCGAAAG
CCTTCACCAGTGGCAACAACACTGCATGACCCCATCGTCGCTACCAAACCCTTCAGCACC
TGTTATGTGGTCAAGGTGACGGTCAGATGTCATTGTTGTGAATTGACTGCTGCTGTTTAC
TTACAGGAAGGATGAAGAAATCCTCCAGTTAGTTAGCATCCACGACTAGTACCTCAAATG
GCTGCCATGTGGTGCATAGTGCTGATCATTAGATCAATTGGTAAAATGATTGTTATGTGC
ATAGTAGCTCCCTCTAGCATAGTGCTGATCTTGCCCATTCAGTGTTTCAGTGTACACCTA
GAAATAGTCCTGATCTTGCCCATTATTAGTGTTTTAGTAGAGAGTGTACACTGTTGTTGT
TACAAAAAACACAAGCCTGTATGTTGGCATCCAATTAATTTATCTAGCATTCTTGGATTT
AAAAA
clustalw multiple alignements is not computed in this case