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Oryza sativa
cluster # 7977 cluster # 7977       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7977#0 length = 1507 sequences # 3  
consensus_7977#1 length = 1492 sequences # 1  
consensus_7977#2 length = 397 sequences # 1  

consensusID : consensus_7977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1507
fasta sequence
                              [TATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTCGGTATCTGGGTGCTAGCTTGTATTTTAGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]

[+] EMBL OSCYSPRO             [TATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTCGGTATCTGGGTGCTAGCTTGTATTTTAGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAAC                                                                                      ]
[+] EMBL BI799886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAACCACCCTGT GCT TTCCAGTAGAGGCTACCGCCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCACGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGAC ACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAAAAAAA                                                                  ]
[+] EMBL CF316442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]


>consensus_7977#0 TATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTCGGTATCTGGGTGCTAGCTTG TATTTTAGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTG GCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTC TCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCG CGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAAC GTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTC AGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCG GGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCC TTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGC GGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGACG GTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAG CAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGAT TACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATAT AGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGAT GGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAG CCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTC TTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATA ACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAG AGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATC GCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGA GTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCG ATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAACTGGATT TAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAA ATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGT ACCGTAT



consensusID : consensus_7977#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1492
fasta sequence
                              [GAACTGAATAAAGTCGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTCGGTATCTGGGTGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAATTTGCTCAAATCGACATTACTGGGAAAATATTTTTTTGCAGACAAGGTGC]

[+] EMBL AK071495             [GAACTGAATAAAGTCGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTCGGTATCTGGGTGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAATTTGCTCAAATCGACATTACTGGGAAAATATTTTTTTGCAGACAAGGTGC]


>consensus_7977#1 GAACTGAATAAAGTCGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTG TCGGTATCTGGGTGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCG GCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGC GACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACC GTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGG TTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGG CCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACC TACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGG GGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGC GAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTC TCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTG TCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTC ATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTAC CCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACG ATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCA AACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAG GGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTAC GGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGG GGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGT GGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGT AACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATA TGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGTCAAC TGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTA GGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAA AATTTGCTCAAATCGACATTACTGGGAAAATATTTTTTTGCAGACAAGGTGC



consensusID : consensus_7977#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence
                              [CGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCACGCCGNCNAGGGCTATCCCGTTCACGGAGAGCNACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGACGGTTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCGGCGGTTCAACGTGTTCGTGGAGAACGCNAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGCTTGGCNCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGAACTAAGNGGGCT]

[+] EMBL AU163651             [CGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCACGCCGNCNAGGGCTATCCCGTTCACGGAGAGCNACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTGGCGGACGGTTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCGGCGGTTCAACGTGTTCGTGGAGAACGCNAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGCTTGGCNCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGAACTAAGNGGGCT]


>consensus_7977#2 CGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTGTGAAAACCGTGCGA AATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCACG CCGNCNAGGGCTATCCCGTTCACGGAGAGCNACCTCTCGTCGGAGGAGAGCCTGCGGGCG CTGTACGAGCGGTGGCGGACGGTTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTG GCAACGACGACGGCGAGGCTCGCGGCGGTTCAACGTGTTCGTGGAGAACGCNAGGTACAT CCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGCTTGGCNCTGAACAAGTTCGCCGA CATGACGACGGACGAGTTCCGCCGAACTAAGNGGGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7977#1      GAACTGAATAAAGTCGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTG 60
consensus_7977#2      --------------CGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTG 46
consensus_7977#0      ----------------------TATAGCTACCATTCCCCCGGACCTGTGTGTTGGCGCTG 38
                                            **************************************

consensus_7977#1      TCGGTATCTGGGTG----------------GTGAAAACCGTGCGAAATGCTGAGGTGCTT 104
consensus_7977#2      T-------------------------------GAAAACCGTGCGAAATGCTGAGGTGCTT 75
consensus_7977#0      TCGGTATCTGGGTGCTAGCTTGTATTTTAGGTGAAAACCGTGCGAAATGCTGAGGTGCTT 98
                      *                               ****************************

consensus_7977#1      CCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTAT 164
consensus_7977#2      CCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCA-CGCCGNCNAGGGCTAT 134
consensus_7977#0      CCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTAT 158
                      ******************************************* ***** * ********

consensus_7977#1      CCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTG 224
consensus_7977#2      CCCGTTCACGGAGAGCNACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTG 194
consensus_7977#0      CCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAGCCTGCGGGCGCTGTACGAGCGGTG 218
                      **************** *******************************************

consensus_7977#1      GCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGG 284
consensus_7977#2      GCGGA-CGGTTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGG 253
consensus_7977#0      GCGGAGCCGGTACACCGTGTCGCGGCCGGCAGCATCAGGAGGCGTTGGCAACGACGACGG 278
                      ***** * * **************************************************

consensus_7977#1      CGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAA 344
consensus_7977#2      CGAGGCTCGC-GGCGGTTCAACGTGTTCGTGGAGAACGCNAGGTACATCCACGAGGCGAA 312
consensus_7977#0      CGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAA 338
                      ********** **************************** ********************

consensus_7977#1      CAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGA 404
consensus_7977#2      CAGGAGGGGCGGCCGGCCGTTCAGCTTGGCNCTGAACAAGTTCGCCGACATGACGACGGA 372
consensus_7977#0      CAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGA 398
                      ************************  **** *****************************

consensus_7977#1      CGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGG 464
consensus_7977#2      CGAGTTCCGCCGAAC-TAAGNGGGCT---------------------------------- 397
consensus_7977#0      CGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGCGGCGG 458
                      ************ ** ** * *****                                  

consensus_7977#1      CCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCC 524
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCC 518
                                                                                  

consensus_7977#1      CGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGG 584
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGG 578
                                                                                  

consensus_7977#1      GAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGG 644
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      GAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGG 638
                                                                                  

consensus_7977#1      GAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGG 704
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      GAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGG 698
                                                                                  

consensus_7977#1      CTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCAC 764
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CTGCGACGGCGGGCTCATGGATTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCAC 758
                                                                                  

consensus_7977#1      CACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAG 824
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAG 818
                                                                                  

consensus_7977#1      CTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCT 884
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCT 878
                                                                                  

consensus_7977#1      ACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTT 944
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      ACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTT 938
                                                                                  

consensus_7977#1      CCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGT 1004
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGT 998
                                                                                  

consensus_7977#1      TGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTC 1064
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      TGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTC 1058
                                                                                  

consensus_7977#1      GTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGA 1124
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      GTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGA 1118
                                                                                  

consensus_7977#1      CTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACG 1184
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACG 1178
                                                                                  

consensus_7977#1      CAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAG 1244
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      CAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAG 1238
                                                                                  

consensus_7977#1      GGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTA 1304
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      GGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTA 1298
                                                                                  

consensus_7977#1      AGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGT 1364
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      AGCTTTCGTTGTCAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGT 1358
                                                                                  

consensus_7977#1      GTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTC 1424
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      GTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTC 1418
                                                                                  

consensus_7977#1      AACTGGATTGCTGAAAAATTTGCTCAAATCGACATTACTGGGAAAATATTTTTTTGCAGA 1484
consensus_7977#2      ------------------------------------------------------------
consensus_7977#0      AACTGGATTGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1478
                                                                                  

consensus_7977#1      CAAGGTGC--------------------- 1492
consensus_7977#2      -----------------------------
consensus_7977#0      AACCCCTGTCTTGCCGTTACGTACCGTAT 1507
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)