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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7988#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3398 fasta sequence
[GCTGGGACAGTCCCGCGAGTGGTGCGTTTCCGGTAACCAACCAATCATTCCCCCCAATCAATAATCTAGGCAGCCGAAATCCCAGCCGTCCGATGCGACGCAGGCGGCGGCGGCGGGCGTCCAACCCAGCACGCGTCGCGTCGCGTCGGTTTGGGTTTGGGTTAGCCCAGCCGCTGCCCTGCCACTGCCAGCCAGACTCGCAGCAGCAGTCGCCGCCTCGAGCCAACGCATCCTCTCTCACCTCACCTCACCTCGCCCCACCCTCCCCGCCTCCTCCTCCTCCGCCGCCGCCGGTGAGGGTCCCCTCCTCCTCCTCCTCCTCCGGCGAGATCCACCCAATCCCTCCCCAGTCCCCGCTCGGCGCGACGGCAGCCAGATCCGCCGCTGCCGCTGCGATGCCCCGGTAGCGAGCGGTGGGTGGGTCCCGCCTGAAGCCGCCCGCGATTCCCGGGGTCAGGCGCCTCCTCCTCCGCCGTCTCGCTCCTGAGGTATTTCTTCACATCGAGTGTTCCTCATCAACCTGCGCAACATATATTTCCAACATAACATACAACCCTGAGCCTTTTGTATAAAAGTGATGGCAGAAGGTCAGGATGGTTATTTTGACTCATCCACTGACAGCTTGCGTGTTGAGCCTATTTATGAATCATTCTTGTGTCCTCTCTCTAAACAAGTTATGCGGGATCCTGTCACTATAGAGAGTGGTGCCACATTTGAACGTGAAGCTATTCTGAAGTGGTTCAAGGACAATGGTAGCGGTGGGAGGAGACTTGTCTGCCCTGTTACTAATAAGGAACTCAGCAGTACTGAGTTAAATCCAAGTATTGCTCTGCGGAATACCATTGATGAATGGATGCATAGAAATGAGGCAGCGAAACTTGACGTTGCCCGTAAGTCATTAACCTCTGATTGTTCAGAAGGTGATATTTTGCAAGCTCTTGAGTATGTTGCGGAGATATGCCAGAGAAGTAGATCCAGTAGACATTTAGTGAGGAAAGTTGGGTTGATTAGCTTGATTACTGACTTGTTGAAGAATAGCAGTCCAAAAGTACGTCAAAAGGCATTGGGAAGCCTTCGCTTTGTAGCAAAAAATGACAATGACAACAAGAATGAAATTGCTGCTGGGGACAATATTCGCACTATTGTGAAGTTCTTAAATCATGGGCACTCACAGGAGAAAGAACAGGCTGTATCTTTGTTATATGAACTTTCAGAATATAAACCTCTTTCGGAAAAGATTGGCAGTGTTTCTGGTGCTATTCTTATTCTTGTCGGCTTGTCGAGTAGTAAAGTAGAAAACCTATTGACAGTTGATAGAGCTGAGAAGACATTGGAAAATTTAGAGAGCTGCGAAAAGAGTGTTAGACAGATGGCTGAAAACGGTAGGCTGCAACCACTTCTTAGGCTTCTCCTTGAAGGTTCATCTGATACACAATTATCCATGGCTGCACATCTTGGAGAGCTTGTTTTAAGCAATGATGTGAAGGTACTTGTGGCACAAACAGCAGGCTCTACACTGGTGAATATCATGAAAAGTGGGAACAGGGAAGCCAGAGAAGCAGCTCTTAAGGCATTGAATCAAATTTCATCTTATGATACCAGCGCAAAGATACTTATTGAAGCAGGCATTCTTCCACCTCTCATCACAGATCTCTTCACTGTTGGCAGTAACCAGCTTCCAATGAGGTTGAAGGAAGTATCGGCGACAATTCTTGCAAATATTGTGGCATCAGGTGCAAGTTTTGAGTCCGTTCCACTTGATCACAACCGCCAGAACTTGGTGTCAGAAGAAATTGTTCACAACCTGCTTCATCTCATCAGCAATACTGGACCTGCAATTGAGTGCAAATTACTTCAAGTCCTTGTTGGTCTAACCACTTCTGCTACAACTGTCCAAAGCATAGTTGATGCCATCAAAAGCTCTGGTGCTACTGTCAGTTTGATTCAGTTTGTAGAAGCACCTCAAAGAGAAGTTCGCTTGGCTTCCATCAAACTTTTGAATAATATATCACCTTTTATGGGTCAAGAACTAGCTGAAGCTTTTCGTGGAAATTTTAGTCAACTCAGCAGCTTGGTCAGGGTAATTGCTGACAACAACGGAATTTCTGAAGAACAAGCAGCAGCTGCTGGCCTCATAGCTGATCTTCCTCCGCGGGACTCAGTACTCACCAGACGTCTTCTACAAGATGGGGCCTTTTCCACAATCATAACAAAAGTGACAATGGTTCGGCAAGGGGATATTCGTGGTGGCCGTTTTGTCAATCCATTTCTTGAAGGTCTAGTTAGGGTAGTTTCCCGGATCACATTTATCTTGGATGATCTAGATATCATTGATGTTGCTCGTGACTACAATCTCACTCCCCTCTTTACTGACCTACTTCAGATGAATGGTCTCGACACTGTCCAGATTGTCTCTGCTACTGCACTAGAGAATCTCTCTCGCCAGTCAAAGCTTCTAACTAGGATAGTGCCGGCTCCCAACCCAGGATTTTGTTTTTCAATATTTCCATGCCTCAGTCAGAAGTCCGTGGCAACTGGCGCTTGCAGAGTCCATGTTGGGATATGTTCTGCAAGGGAGAGCTTTTGTCTCTTGGAAGGGAAGGCAGTAGAAAAGTTGGTCGCTTGCTTGGACCACAACAATGAGAAAGTGGTTGAAGCTGCTCTAGCAGCACTGTCCACCTTGTTGGAGGATGGAGTAGACATTGAACAAGGTGTCATGGTCTTGTGTGATGCAGAGGGGGTCAATCCAATTCTAGAGGTATTATGCGAGAATCGTAATGAGGCACTTCGGCAGCGAGCAGTGTGGGCGGTGGAGAGGATCCTGAGGATAGACGAAATAGCTTATGAGATATCTGGAAACCAAAATGTTGGAACAGCATTAGTTGAAGCATTCAGGCATGGTGACTCCAGGACAAGACAAATAGCAGAGCGAGCACTAAAGCATGTTGACAAGCTGCCCAATTTCTCTGGAATATTTTCCAAGATGGGGGCAGCATGACAATCTTAGAAAAGAATAGGCTAGCTCTACTTCACACGTCGATTGCAGATCCTCTTGAGTTGCAGAGGAACACAGAGCTTGAATCTTTGTGCATGCCGAATGTCAGGATTGTGTCCCCAGCTTAACAATGTTGGTCTTGCAGACTGCGGCTCTCCAAATGGTTTTCGAATAGTCAGATTGACTGAATGAAAATTGAAGGTATTGCATGTGTTGTATAGTGTGGTGTATATCTTTCCCTTGTAATCTTGTGTCTGTATTATTCAGATGGCCGGATCCATAGCATGCTATTTTTCCTCTGTTCATACAATATTTATACAT-AAACCCCAACATGGGGGGTCAAAGGAAAGGGAAAAGAAGTGATGCATAAAAGAAGTTTTAGCAAAAAAAAAAAGCNGGCCGN]
[+] EMBL AK102429 [GCTGGGACAGTCCCGCGAGTGGTGCGTTTCCGGTAACCAACCAATCATTCCCCCCAATCAATAATCTAGGCAGCCGAAATCCCAGCCGTCCGATGCGACGCAGGCGGCGGCGGCGGGCGTCCAACCCAGCACGCGTCGCGTCGCGTCGGTTTGGGTTTGGGTTAGCCCAGCCGCTGCCCTGCCACTGCCAGCCAGACTCGCAGCAGCAGTCGCCGCCTCGAGCCAACGCATCCTCTCTCACCTCACCTCACCTCGCCCCACCCTCCCCGCCTCCTCCTCCTCCGCCGCCGCCGGTGAGGGTCCCCTCCTCCTCCTCCTCCTCCGGCGAGATCCACCCAATCCCTCCCCAGTCCCCGCTCGGCGCGACGGCAGCCAGATCCGCCGCTGCCGCTGCGATGCCCCGGTAGCGAGCGGTGGGTGGGTCCCGCCTGAAGCCGCCCGCGATTCCCGGGGTCAGGCGCCTCCTCCTCCGCCGTCTCGCTCCTGAGGTATTTCTTCACATCGAGTGTTCCTCATCAACCTGCGCAACATATATTTCCAACATAACATACAACCCTGAGCCTTTTGTATAAAAGTGATGGCAGAAGGTCAGGATGGTTATTTTGACTCATCCACTGACAGCTTGCGTGTTGAGCCTATTTATGAATCATTCTTGTGTCCTCTCTCTAAACAAGTTATGCGGGATCCTGTCACTATAGAGAGTGGTGCCACATTTGAACGTGAAGCTATTCTGAAGTGGTTCAAGGACAATGGTAGCGGTGGGAGGAGACTTGTCTGCCCTGTTACTAATAAGGAACTCAGCAGTACTGAGTTAAATCCAAGTATTGCTCTGCGGAATACCATTGATGAATGGATGCATAGAAATGAGGCAGCGAAACTTGACGTTGCCCGTAAGTCATTAACCTCTGATTGTTCAGAAGGTGATATTTTGCAAGCTCTTGAGTATGTTGCGGAGATATGCCAGAGAAGTAGATCCAGTAGACATTTAGTGAGGAAAGTTGGGTTGATTAGCTTGATTACTGACTTGTTGAAGAATAGCAGTCCAAAAGTACGTCAAAAGGCATTGGGAAGCCTTCGCTTTGTAGCAAAAAATGACAATGACAACAAGAATGAAATTGCTGCTGGGGACAATATTCGCACTATTGTGAAGTTCTTAAATCATGGGCACTCACAGGAGAAAGAACAGGCTGTATCTTTGTTATATGAACTTTCAGAATATAAACCTCTTTCGGAAAAGATTGGCAGTGTTTCTGGTGCTATTCTTATTCTTGTCGGCTTGTCGAGTAGTAAAGTAGAAAACCTATTGACAGTTGATAGAGCTGAGAAGACATTGGAAAATTTAGAGAGCTGCGAAAAGAGTGTTAGACAGATGGCTGAAAACGGTAGGCTGCAACCACTTCTTAGGCTTCTCCTTGAAGGTTCATCTGATACACAATTATCCATGGCTGCACATCTTGGAGAGCTTGTTTTAAGCAATGATGTGAAGGTACTTGTGGCACAAACAGCAGGCTCTACACTGGTGAATATCATGAAAAGTGGGAACAGGGAAGCCAGAGAAGCAGCTCTTAAGGCATTGAATCAAATTTCATCTTATGATACCAGCGCAAAGATACTTATTGAAGCAGGCATTCTTCCACCTCTCATCACAGATCTCTTCACTGTTGGCAGTAACCAGCTTCCAATGAGGTTGAAGGAAGTATCGGCGACAATTCTTGCAAATATTGTGGCATCAGGTGCAAGTTTTGAGTCCGTTCCACTTGATCACAACCGCCAGAACTTGGTGTCAGAAGAAATTGTTCACAACCTGCTTCATCTCATCAGCAATACTGGACCTGCAATTGAGTGCAAATTACTTCAAGTCCTTGTTGGTCTAACCACTTCTGCTACAACTGTCCAAAGCATAGTTGATGCCATCAAAAGCTCTGGTGCTACTGTCAGTTTGATTCAGTTTGTAGAAGCACCTCAAAGAGAAGTTCGCTTGGCTTCCATCAAACTTTTGAATAATATATCACCTTTTATGGGTCAAGAACTAGCTGAAGCTTTTCGTGGAAATTTTAGTCAACTCAGCAGCTTGGTCAGGGTAATTGCTGACAACAACGGAATTTCTGAAGAACAAGCAGCAGCTGCTGGCCTCATAGCTGATCTTCCTCCGCGGGACTCAGTACTCACCAGACGTCTTCTACAAGATGGGGCCTTTTCCACAATCATAACAAAAGTGACAATGGTTCGGCAAGGGGATATTCGTGGTGGCCGTTTTGTCAATCCATTTCTTGAAGGTCTAGTTAGGGTAGTTTCCCGGATCACATTTATCTTGGATGATCTAGATATCATTGATGTTGCTCGTGACTACAATCTCACTCCCCTCTTTACTGACCTACTTCAGATGAATGGTCTCGACACTGTCCAGATTGTCTCTGCTACTGCACTAGAGAATCTCTCTCGCCAGTCAAAGCTTCTAACTAGGATAGTGCCGGCTCCCAACCCAGGATTTTGTTTTTCAATATTTCCATGCCTCAGTCAGAAGTCCGTGGCAACTGGCGCTTGCAGAGTCCATGTTGGGATATGTTCTGCAAGGGAGAGCTTTTGTCTCTTGGAAGGGAAGGCAGTAGAAAAGTTGGTCGCTTGCTTGGACCACAACAATGAGAAAGTGGTTGAAGCTGCTCTAGCAGCACTGTCCACCTTGTTGGAGGATGGAGTAGACATTGAACAAGGTGTCATGGTCTTGTGTGATGCAGAGGGGGTCAGTCCAATTCTAGAGGTATTATGCGAGAATCGTAATGAGGCACTTCGGCAGCGAGCAGTGTGGGCGGTGGAGAGGATCCTGAGGATAGACGAAATAGCTTATGAGATATCTGGAAACCAAAATGTTGGAACAGCATTAGTTGAAGCATTCAGGCATGGTGACTCCAGGACAAGACAAATAGCAGAGCGAGCACTAAAGCATGTTGACAAGCTGCCCAATTTCTCTGGAATATTTTCCAAGATGGGGGCAGCATGACAATCTTAGAAAAGAATAGGCTAGCTCTACTTCACACGTCGATTGCAGATCCTCTTGAGTTGCAGAGGAACACAGAGCTTGAATCTTTGTGCATGCCGAATGTCAGGATTGTGTCCCCAGCTTAACAATGTTGGTCTTGCAGACTGCGGCTCTCCAAATGGTTTTCGAATAGTCAGATTGACTGAATGAAAATTGAAGGTATTGCATGTGTTGTATAGTGTGGTGTATATCTTTCCCTTGTAATCTTGTGTCTGTATTATTCAGATGGCCGGATCCATAGCATGCTATTTTTCCTCTGTTCATACAATATTTATACAT AAACCCCAACATGGGGGGTCAAAGGAAAGGGAAAAGAAGTGTTGCATAAAAGAAGTTTTAGCA ]
[+] EMBL CB644678 [ AAAGCCTATTTGATGCCATCAAAAGCTCTGGTGCTACTGTCAGTTTGATTCAGTTTGTAGAAGCACCTCAAAGAGAAGTTCGCTTGGCTTCCATCAAACTTTTGAATAATATATCACCTTTTATGGGTCAAGAACTAGCTGAAGCTTTTCGTGGAAATTTTAGTCAACTCAGCAGCTTGGTCAGGGTAATTGCTGACAACAACGGAATTTCTGAAGAACAAGCAGCAGCTGCTGGCCTCATAGCTGATCTTCCTCCGCGGGACTCAGTACTCACCAGACGTCTTCTACAAGATGGGGCCTTTTCCACAATCATAACAAAAGTGACAATGGTTCGGCAAGGGGATATTCGTGGTGGCCGTTTTGTCAATCCATTTCTTGAAGGTCTAGTTAGGGTAGTTTCCCGGATCACATTTATCTTGGATGATCTAGATATCATTGATGTTGCTCGTGACTACAATCTCACTCCCCTCTTTACTGACCTACTTCAGATGAATGGTCTCGACACTGTCCAGATTGTCTCTGCTACTGCACTAGAGAATCTCTCTCGCCAGTCAAAGCTTCTAACTAGGATAGTGCCGGCTCCCAACCCAGGATTTTGTTTTTCAATATTTCCATGCCTCAGTCAGAAGTCCGTGGCAACTGGCGCTTGCAGAGTCCATGTTGGGATATGTTCTGCAAGGGAGAGCTTTTGTCTCTTGGAAGGGAAGGCAGTAGAAAAGTTGGTCGCTTGCTTGGACCACAACAATGAGAAAGTGGTTGAAGCT ]
[+] EMBL BE228945 [ gagTCGTGGTGGCCGTTTTGTCAATCCATTTCTTGAAAGTCTAGTTAGGGTAGTTTCCCGGATCACATTTATCTTGGATGATCTAGATATCATTGATGTTGCTCGTGACTACAATCTCACTCCCCTCTTTACTGACCTACTTCAGATGAATGGTCTCGACACTGTCCAGATTGTCTCTGCTACTGCACTANANAATCTCTCTCGCCAGTCAAAGCTTCTAACTAGGATAGTGCCGGCTCCCAACCCAGGATTTTGTTTTTCAATATTTCCATGCCTCAGTCAGAANTCCGTGGCAACTGGCGCTTGCAGANTCCATGTTGGGATATGTTCTGCAAGGGANANCTTTTGTCTCTTGGAANGGAAAGCAGTANAAAANTTGGTCGCTTGCTTGGACCACAACAATGANAAAGTGGTTGAAGCTGCTCTAACANCACTGTCCACCTTGTTGGANGATGGAATANACATTGAACAANGTGTCATGGTCTT ]
[-] EMBL CB644679 [ AGTTGGTCGCTTGCTTGGACCACAACAATGAGAAAGTGGTTGAAGCTGCTTTAGCAGCACTGTCCACCTTGTTGGAGGATGGAGTAGACATTGAACAAGGTGTCATGGTCTTGTGTGATGCAGAGGGGGTCAATCCAATTCTAGAGGTATTATGCGAGAATCGTAATGAGGCACTTCGGCAGCGAGCAGTGTGGGCGGTGGAGAGGATCCTGAGGATAGACGAAATAGCTTATGAGATATCTGGAAACCAAAATGTTGGAACAGCATTAGTTGAAGCATTCAGGCATGGTGACTCCAGGACAAGACAAATAGCAGAGCGAGCACTAAAGCATGTTGACAAGCTGCCCAATTTTTTTGGAATATTTTCCAAGATGGGGGCAGCATGACAATTTTAGAAAAGAATAGGCTAGCTTTACTTCACACGTCGATTGCAGATCCTCTTGAGTTGCAGAGGAACACAGAGCTTGAATCTTTGTGCATGCCGAATGTCAGGATTGTGTCCCCAGCTTAACAATGTTGGTCTTGCAGACTGCGGCTCTCCAAATGGTTTTCGAATAGTCAGATTGACTGAATGAAAATTGAAGGTATTGCATGTGTTGTATAGTGTGGTGTATATCTTTCCCTTGTAATCTTGTGTCTGTATTATTCAGATGGCCGGATCCATAGCATGCTATTTTTCCTCTGTTCATACAATATTTATACAT AAACCCGGACATGGGGGGTCAAAGGAAAAAAAAAAAAAcctaaaa ]
[+] EMBL CA765839 [ GTGATGCAGAGGGGGTCAATCCAATTCTAGAGGTATTATGCGAGAATCGTAATGAGGCACTTCGGCAGCGAGCAGTGTGGGCGGTGGAGAGGATCCTGAGGATAGACGAAATAGCTTATGAGATATCTGGAAACCAAAATGTTGGAACAGCATTAGTTGAAGCATTCAGGCATGGTGACTCCAGGACAAGACAAATAGCAGAGCGAGCACTAAAGCATGTTGACAAGCTGCCCAATTTCTCTGGAATATTTTCCAAGATGGGGGCAGCATGACAATCTTAGAAAAGAATAGGCTAGCTCTACTTCACACGTCGATTGCAGATCCTCTTGAGTTGCAGAGGAACACAGAGCTTGAATCTTTGTGCATGCCGAATGTCAGGATTGTGTCCCCAGCTTAACAATGTTGGTCTTGCAGACTGCGGCCCTCCAAATGGTTTTCGAATAGTCAGATTGACTGAATGAAAATTGAAGGTATTGCATGTGTTGTATAGTGTGGTGTATATCTTTCCCTTGTAATCTTGTGTCTGTATTATTCAGATGGCCGGATCCATAGCATGCTATTTTTCCTCTGTTCATACAATATTTATACATAAAACCCCAACATGGGGGGTCAAAGGTAAGGGAAAAGAAGTGNTGCATAAAAAAAAAAAAAAAGAAAAAAAAAAGCNGGCCGN]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||