cluster # 7990

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7990 cluster # 7990 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7990#0 length = 699 sequences # 5
consensusID : consensus_7990#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 699
fasta sequence
                              [CCAACCCAACCCCTCCTCATCTCGCATCGCAAGCCGCCGCCGCGGATGGAAGGCCTCATCCCG-CTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCGCCCCGACGGCGGCGCCGCCGCCGGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCAGCAGCAGCCGCACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGGCGGCTGCCGCGGGTAGCGCTCCCCAAGGCCCGCAGCGTCCGCGTCTTCTCCTGCATCGGCGCCGGCGCCGGAGTGGCCGCGTGAGTTTGCGTTCCACTTCCAATCATGTCAAATCGCGGCGAAACCTGTGAATACATACACCTGACCTGGTGGCCGCCATGATCATCAGTTCATCGCTGGAGCTGGAGATTGTGGCGAAGATTGATTAGTTGAACCGGTTCGGATTTCGTGTTTTTAATTAGTTCTCTCTCCCTCTTTTTTTTTCT-TTGTTTGGATCTGGTAGAAATGATTCGTATGTGGTGGTGTTAGTAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTTGTTATACACGGCAGATTTTGAACTTTGTTCTGCCTCTCG]

[+] EMBL AK068601             [CCAACCCAACCCCTCCTCATCTCGCATCGCAAGCCGCCGCCGCGGATGGAAGGCCTCATCCCG CTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCGCCCCGACGGCGGCGCCGCCGCCGGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCAGCAGCAGCCGCACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGGCGGCTGCCGCGGGTAGCGCTCCCCAAGGCCCGCAGCGTCCGCGTCTTCTCCTGCATCGGCGCCGGCGCCGGAGTGGCCGCGTGAGTTTGCGTTCCACTTCCAATCATGTCAAATCGCGGCGAAACCTGTGAATACATACACCTGACCTGGTGGCCGCCATGATCATCAGTTCATCGCTGGAGCTGGAGATTGTGGCGAAGATTGATTAGTTGAACCGGTTCGGATTTCGTGTTTTTAATTAGTTCTCTCTCCCTCTTTTTTTTTTTCTTGTTTGGATCTGGTAGAAATGATTCGTATGTGGTGGTGTTAGTAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTTGTTATACACG                             ]
[+] EMBL OSR26091A            [                        CATCGCAAGCCGCCGCCGCGNATGGAAGGCCTCATCCCG CTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCG CCCGACGGCGGCGCCGCCG  NGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB664170             [                                            GATGGAAGGCCTCATCCCG CTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCGCCCCGACGGCGGCGCCGCCGCCGGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCAGCAGCAGCCGCACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGGCGGCTGCCGCGGGTAGCGCTCCCCAAGGCCCGCAGCGTCCGCGTCTTCTCCTGCATCGGCGCCGGCGCCGGAGTGGCCGCGTGAGTTTGCGTTCCACTTCCAATCATGTCAAATCGCGGCGAAACCTGTGAATACATACCCCTGACCTGGTGGCCGCCATGATCATCAGTTCATCGCTGGAGCTGGAGATTGTGGCGAAGATTGATTAGTTGAACCGGTTCGGATTTCGTGTTTTTAATTAGTTCTCTCTCCCTCTTTTTTTTTCT TTGTTTGGATCTGGTAGAAATGATTCGTATGTGGTGGTGTTAGTAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTTGTTATACACGGCAGATTTTGAACTTTGTTCTGCCTCTCG]
[+] EMBL CB664169             [                                                    GCCTCATCCCGNCTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCGCCCCGACGGCGGCGCCGCCGCCGGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGGTCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCAGCAGCAGCCGCACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGGCGGCTGCCGCGGGTAGCGCTCCCCAAGGCCCGCAGCGTCCGCGTCTTCTCCTGCATCGGCGCCGGCGCCGGAGTGGCCGCGTGAGTTTGCGTTCCACTTCCAATCATGTCAAATCGCGGCGAAACCTGTGAATACATACACCTGACCTGGTGGCCGCCATGATCATCAGTTCATCGCTGGAGCTGGAGATTGTGGCGAAGATTGATTAGTTGAACCGGTTCGGATTTCGTGTTTTTAATTAGTTCTCTCTCCCTCTTTTTTTTTCT TTGTTTGGATCTGGTAGAAATGATTCCTATGTGGTGGTGTTAGCAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTTGTTATACACGGCAG                         ]
[+] EMBL AU095477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGATTCGTATGTGGTGGTGTTAGTAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTTGTTATACACGGCAGATTTTGAAaaaaa            ]




>consensus_7990#0
CCAACCCAACCCCTCCTCATCTCGCATCGCAAGCCGCCGCCGCGGATGGAAGGCCTCATC
CCGCTTCTCTACAAGGCCATCAAGGATCGCCGGGGCGGCCGCCCCGACGGCGGCGCCGCC
GCCGGCGTGGACCTCTACGACCCGGAGCAGCGCCGGCTGTGGCTGGAGCAGGAGGTGCGG
TCCCCGCTCCACCCATCGGCCGCGGCGGCGGGGGGCCAGCACCAGCAGCAGCAGCAGCCG
CACCGGCGGAACCTGTCGCTGGAGGAGCTGGCCGGCGAGGTGGGGCTCTCCCCTGGCCGG
CGGCTGCCGCGGGTAGCGCTCCCCAAGGCCCGCAGCGTCCGCGTCTTCTCCTGCATCGGC
GCCGGCGCCGGAGTGGCCGCGTGAGTTTGCGTTCCACTTCCAATCATGTCAAATCGCGGC
GAAACCTGTGAATACATACACCTGACCTGGTGGCCGCCATGATCATCAGTTCATCGCTGG
AGCTGGAGATTGTGGCGAAGATTGATTAGTTGAACCGGTTCGGATTTCGTGTTTTTAATT
AGTTCTCTCTCCCTCTTTTTTTTTCTTTGTTTGGATCTGGTAGAAATGATTCGTATGTGG
TGGTGTTAGTAGTAGTGATTGATGAGTAGTAAGGTGTTTCTACTGTAATTACTTGTTGTT
GTTATACACGGCAGATTTTGAACTTTGTTCTGCCTCTCG
clustalw multiple alignements is not computed in this case