cluster # 8019

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Oryza sativa
cluster # 8019 cluster # 8019 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8019#0 length = 1411 sequences # 5
consensusID : consensus_8019#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1411
fasta sequence
                              [CGCTCCCGAGCAAGAGAAGCGGAAGAAGGAAGTCCACCGCGCGAAACGCCGGAGATGCCGCCGGGGGCCTCGCCGGCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGAGCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGTTTCCAAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCACGCTGTGTACACCATCGCGCGATCTGAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCAGCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTTTATAACAGAGCTAAACAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCTGCAGAAGCAGGTGCTTTGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGACTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGATGCTTTGAGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTTTTGCTGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTGATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGAATTCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAAGTAACTGCCATTCTGCTTACTTATCCTTACCAGGTCATCCGAGCACGCTTGCAGCAACGACCTGGTAGTGATGGCACTCCAAAGTACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGCATGAAGGTGTCCGTGGATTTTACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAATTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAG-CCAATCCCACCTTCTGGAGTTCGAAGCAACATTCATCTTCATTGCTGCGTTATTGTCTCATCCACTTAACATGCACAGGCTAGAGAAATGTTACATGAGAGAAGTTGCGATTGACATAATCGCCGTAGATTTTGTTTTGAGGAACATAGATCAGTTTTTGTTTCTTCCTGAAGTAGTT-CTTCCTGTAGTC-CAGTTGAATACAGTTTTTGGATCCTT-AT-GTAATCGGGAGCCTTTACAGGTCTACCCATGTGCATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAA-ACTGAAGTAATGCCAGACAAAATTACACCAAAAAA]

[+] EMBL AK072060             [CGCTCCCGAGCAAGAGAAGCGGAAGAAGGAAGTCCACCGCGCGAAACGCCGGAGATGCCGCCGGGGGCCTCGCCGGCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGAGCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGTTTCCAAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCACGCTGTGTACACCATCGCGCGATCTGAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCAGCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTTTATAACAGAGCTAAACAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCTGCAGAAGCAGGTGCTTTGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGACTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGATGCTTTGAGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTTTTGCTGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTGATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGAATTCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAAGTAACTGCCATTCTGCTTACTTATCCTTACCAGGTCATCCGAGCACGCTTGCAGCAACGACCTGGTAGTGATGGCACTCCAAAGTACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGCATGAAGGTGTCCGTGGATTTTACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAATTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAG CCAATCCCACCTTCTGGAGTTCGAAGCAACATTCATCTTCATTGCTGCGTTATTGTCTCATCCACTTAACATGCACAGGCTAGAGAAATGTTACATGAGAGAAGTTGCGATTGACATAATCGCCGTAGATTTTGTTTTGAGGAACATAGATCAGTTTTTGTTTCTTCCTGAAGTAGTT CTTCCTGTAGTC CAGTTGAATACAGTTTTTGGATCCTT AT GTAATCGGGAGCCTTTACAGGTCTACCCATGTGCATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAA ACTGAAGTAATGCCAGACA                ]
[+] EMBL AK120533             [                AAGCGGAAGAAGGAAGTCCACCGCGCGAAACGCCGGAGATGCCGCCGGGGGCCTCGCCGGCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGAGCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGTTTCCAAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCACGCTGTGTACACCATCGCGCGATCTGAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCAGCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTTTATAACAGAGCTAAACAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCTGCAGAAGCAGGTGCTTTGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGACTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGATGCTTTGAGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTTTTGCTGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTGATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGAATTCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAAGTAACTGCCATTCTGCTTACTTATCCTTACCAGGTCATCCGAGCACGCTTGCAGCAACGACCTGGTAGTGATGGCACTCCAAAGTACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGCATGAAGGTGTCCGTGGATTTTACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAATTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAG CCAATCCCACCTTCTGGAGTTCGAAGCAACATTCATCTTCATTGCTGCGTTATTGTCTCATCCACTTAACATGCACAGGCTAGAGAAATGTTACATGAGAGAAGTTGCGATTGACATAATCGCCGTAGATTTTGTTTTGAGGAACATAGATCAGTTTTTGTTTCTTCCTGAAGTAGTT CTTCCTGTAGTC CAGTTGAATACAGTTTTTGGATCCTT AT GTAATCGGGAGCCTTTACAGGTCTACCCATGTGCATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAA ACTGAAGTAATGCCAGACAAAATTAC         ]
[+] EMBL CA764770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAATTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAG CCAATCCCACCTTCTGGAGTTCGAAGCAACATTCATCTTCATTGCTGCGTTATTGTCTCATCCACTTAGCATGCACAGGCTAGAGAAATGTTACATGAGAGAAGTTGCGATTGACATAATCGCCGTAGATTTTGTTTTGAGGAACATAGATCAGTTTTTGTTTCTTCCTGAAGTAGTT CTTCCTGTAGTC CAGTTGAATACAGTTTTTGGATCCTT AT GTAATCGGGAGCCTTTACAGGTCTACCCATGTGCATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAA ACTGAAGTAATGCCAGACA                ]
[+] EMBL AA750829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGGATCACAT GAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTGGTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAATTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAGCCCAATCCCACCTTC                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BQ906416             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTAGTTGCTTCCTGTAGTCACAGTTGAATACAGTTTTTGGATCCTTGATGGTAATCGGGAGCCTTTACAGGTCTACCCATGTGCATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAACCCTGNAGTAATGCCAGACAAAATTACACCAAAAAA]




>consensus_8019#0
CGCTCCCGAGCAAGAGAAGCGGAAGAAGGAAGTCCACCGCGCGAAACGCCGGAGATGCCG
CCGGGGGCCTCGCCGGCGGCGTCGGCGGAGGCCTGGACGTGGGAGAACGCCGCCGCAGGA
GCGGCCGCCGGCTTCGCCACCGTCGCGACCCTCCACCCGCTCGACGTCGTCCGCACCCGT
TTCCAAGTGAGCGGCGGGAGGGGATGCTACGACTTGCCGCCGTACAGGAACACTGCGCAC
GCTGTGTACACCATCGCGCGATCTGAGGGTCTGAGAGGACTTTATGCGGGATTTTATCCA
GCAGTTCTTGGATCAACTGTTTCCTGGGGGCTATATTTCTTTTTTTATAACAGAGCTAAA
CAAAGATACTTACAAGGGAAAGATGATCAGCTCCGTCCAGTTCACCATCTTGTCTCAGCT
GCAGAAGCAGGTGCTTTGGTTTGCCTATTCACAAACCCTATATGGCTGGTTAAAACAAGA
CTGCAATTACAAACGCCTAGTCATCATACTTCACGATATTCTGGATTTTCTGATGCTTTG
AGAACTATTCTGAAAGAGGAGGGATGGCTTGCGCTTTACAGAGGGATTGGACCTGGGCTT
TTGCTGGTTACTCATGGAGCGATACAGTTCACGGCCTATGAGGAACTTCGCAAAGCTTTG
ATATTTGCCAAAAGTAGACAGACAAGAACAGACAACAGAAGCTGCGATGATTCCTTGAAT
TCCATTGATTATGCGGCACTTGGGGCTGGTTCGAAAGTAACTGCCATTCTGCTTACTTAT
CCTTACCAGGTCATCCGAGCACGCTTGCAGCAACGACCTGGTAGTGATGGCACTCCAAAG
TACAAAGATAGCTGGCATGTAGTGAAAGAAACTGCAAGGCATGAAGGTGTCCGTGGATTT
TACAGGGGCATCACATCGAATCTGCTCAAAAACCTTCCGGCAGCTTCCCTTACATTTGTG
GTGTATGAAAATGTGATCAAATTATTCAAAGCAGCAAAGGAGAAGACATAATATTTCCAA
TTGTTCCCAGGAGAAACAAGAAAAGAATGTGCGTCATGAAATACTGAGCCAATCCCACCT
TCTGGAGTTCGAAGCAACATTCATCTTCATTGCTGCGTTATTGTCTCATCCACTTAACAT
GCACAGGCTAGAGAAATGTTACATGAGAGAAGTTGCGATTGACATAATCGCCGTAGATTT
TGTTTTGAGGAACATAGATCAGTTTTTGTTTCTTCCTGAAGTAGTTCTTCCTGTAGTCCA
GTTGAATACAGTTTTTGGATCCTTATGTAATCGGGAGCCTTTACAGGTCTACCCATGTGC
ATGTGTACATCCACCATGTCTACGGCTGCTCAACTGAGTTACAACAGTTGTATAAAACTG
AAGTAATGCCAGACAAAATTACACCAAAAAA
clustalw multiple alignements is not computed in this case