These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8027#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 811 fasta sequence [TCGAGTCGACCAACGCGTCCGANCACAAGAATTCAGCTGTACAACCTGATCATCTTACACAAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACAACCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCT-CCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGCAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCT-GCCGGCGCCGCCGCCGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTCCCGAGGAGACCACCTCTGCCGCTGTCGCCGCCGGCGGCGACC--ACCGGAGC-TCGCAGCAGCAGGATGC-TCGGGTCGGTGCCCAGCCCCGGCGTTGGCCACTAGCGGGACGACGCCGGCTGATCTATAGTTAGTTAATACAGTAGATTCAGAGTGTCCCTTTTTTTTATACATATTTGACTTTCTTTAAAATATTTATGTAAATATTATTTTTTAGTTGTTTTATAAAATATAGTTTAAGTATGATGTATTTGTAGGAAAAAGTTAAATAGGAGGAATGATCAAACATGTGTTTAAAGACGTTATTTATTTAAAAAAAAAAGGGAGTATATATATATATCTTGTGAAACTCTAAAGGTTAGAAATTCGCAAGATTTTATCTCAATTTTTCAATTGAACATGGTTTAGCAATTACGATATATGTAAGAGGGATTAGTTATGTGTTTAGATGATAATGATGTGTGTGTGTAA] [+] EMBL AU083496 [TCGAGTCGACCAACGCGTCCGANCACAAGAATTCAGCTGTACAACCTGATCATCTTACACAAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACANCCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCTCCCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGCAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCT GCCGGCGCCGCCGCCGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTCCCGAGGAGACCACCTCTGCCGCTGTCGCCGCCGGCGGCGACC ACCGGAGC TCGCAGCAGCAGGATGC TCGGGTCGGTGCCCAGCCCCGGCGTTGGCCACTAGCGGGACGACGCCGGCTGATCTATAGTTAGTTAATACAGTAGATTCAGAGTGTCCCTTTTTTTTATACATATTTGACTTTCTTTAAAATATTTATGTAAATATTATTTTTTAGTTGTTTTATAAAATATAGTTTAAGTATGATGTATTTGTAGGAAAAAGTTAAATAGGAGGAATGATCAAACATGTGTTTAAAGACGTTATTTATTTAAAAAAAAA ] [+] EMBL AK120469 [ AAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACAACCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCT CCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGCAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCT GCCGGCGCCGCCGCCGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTCCCGAGGAGACCACCTCTGCCGCTGTCGCCGCCGGCGGCGACC ACCGGAGC TCGCAGCAGCAGGATGC TCGGGTCGGTGCCCAGCCCCGGCGTTGGCCACTAGCGGGACGACGCCGGCTGATCTATAGTTAGTTAATACAGTAGATTCAGAGTGTCCCTTTTTTTTATACATATTTGACTTTCTTTAAAATATTTATGTAAATATTATTTTTTAGTTGTTTTATAAAATATAGTTTAAGTATGATGTATTTGTAGGAAAAAGTTAAATAGGAGGAATGATCAAACATGTGTTTAAAGACGTTATTTATTTAAAAAAGAGAGGGAGTATATATATATATCTTGTGAAACTCTAAAGGTTAGAAATTCGCAAGATTTTATCTCAATTTTTCAATTGAACATGGTTTAGCAATTACGATATATGTAAGAGGGATTAGTTATGTGTTTAGATGATAATGATGTGTGTGTGTAA] [+] EMBL AU083495 [ AAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACAACCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCT CCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGCAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCTGGCCGGCGCCGCCGCCGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTCCCGAGGAGACCACCTCTGCCGCTGTCGCCGCCGGCGGCGACC ACCGGAGC TCGCAGCAGCAGGATGC TCGGGTCGGTGCCCAGCCCCGGCGTTGGCCACTAGCGGGACGACGCCGGCTGATCTATAGTTAGTTAATACAGTAGATTCAGAGTGTCCCTTTTTTTTATACATATTTGACTTTCTTTAAAATATTTATGTAAATATTATTTTTTAGTTGTTTTATAAAATATAGTTTAAGTATGATGTATTTGTAGGAAAAAGTTAAATAGGAGGAATGATCAAACATGTGTTTAAAGACGTTATTTATTTAAAAAAAAA ] [+] EMBL AU065411 [ AAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACAACCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCT CCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGCAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCT GCCGGCGCCG CGNCGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTNCCGAGGAGACCAACTCTGCCGCTGTCGCCGCCGG GG GACCCAACCGGAGC TCGNAGNAGCAGGATGT TCGGGTCGGTGCCAAGCCCCGGCGTTTGGCACTAGC GGACGACGCCGGCTNATCTATAGTT ] [+] EMBL AU065414 [ AAGAATTCAGCCATAGCTAGCCCTGATCGATCCAATTCTGAGTTCTTGACCGACAACCATGGCGTCCATGACCGCCGTCGCCGCCGTCCTGCT CCTGGTCTTCTTGCTGCTGACATCGTCGGCTCCGTTCTTGNAAGCCAGGATGATGCCGGGAGACGGCGGGGAGATTGTTCAGGAGGCCGTGACGATGATGATGGGATCCTCT GCCGGCGCCG CGACGCCGCCGTCGCAGGAAGAAGAAGCACGGCGTCGTCCTCGCCGCCGGAGGAGGAGATGCTGCTTCCGAGGAGACCACCTNTGCCGNTGTCGCCGCCGG GGNGACCCAACCGGAGCTTCGNAGCAGCAGGATNCTTCGGGTCGGTGCCCAG CCCGGCGTTGG CAATAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||