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Oryza sativa
cluster # 8028 cluster # 8028       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8028#0 length = 2755 sequences # 4  
consensus_8028#1 length = 327 sequences # 1  

consensusID : consensus_8028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2755
fasta sequence
                              [GGCAGAGAAGGAAGGAAGCCAAACGGCATGGGCTCTCGTGGCGCCGCCGCCGACCATCTCCACGGCGTCCTCGAATTGACGGTGTACGAGGCCGACGACCTCCACAACGCCATCCATGGCCGGATCATCAAGGCGGCGGAGAGCTTGAAGGAGTCACTGGGCGTGCACCGTCTGGCACACAGGATCTACGTCGACGTCGATGTCGGCGCGGCGAGGGTGGCGCGCACCCGCGAGGTGGAGTTCCACCCGACCAACCCCGTCTGGAACCAGTCGTTCCGCCTCCACTGCGCCTACCCGGCGGC-GCCCGTGGCGTTCACCGTCAAGAGCCAGCACCTCGTCGGCGCCGGCGTCCTCGGCGCCGCGCGCGTGCCAGCCGCGCGCGTCGCCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGCGGCGGTGAGCATGGCCACGCGACGCACACCCCGAAGCTCCGCGTCCGGCTGCGGTTCTTGGGCGTGGAGTCCGACCCGTGGTGGGACGCCGGCGTTCGCCTCCCCGGGTTCGCCGGCGTCACGCCGGCGTTCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGCTCGACCCGGGCGTCCGCCTCGCCGGCGGGGGGGCGTACCGGCCGGCGCGCCTGTGGGAGGACATGTACGTCGCCATCCGCGACGCGCGGCGGTTCGTGTACGTCGCCGGGTGGTCGGTGAACGCGGATATCACGCTGGTGCGCGACGCGTCCCGGATGGTCCCCGGCGCCGAGGGCGTCACGCTGGGCGAGCTGCTGCGGCGGAAGGCCGACGAGGGGGTGGCCGTACTGGTGATGCCGTGGCAGGACAAGACGTCCGTCTCCTTCCTCGGCAACGGGGGCCTCATGAGGACACACGACGAGGAGACGCGGCGCTTCTTCGAGGGCACCAACGTGCGCTGCTTCCTCTGCCCGCGCAACGCCGACGCGTCGCTCACCATGGTGCAGAGCATCGAGGTCGCAGCGGAGTTCACGCACCACCAGAAGACGGTCACCCTCGACGCCGCCGCCGCCTCGCCGGGCGACGCGGACGGCAGCCGTCGCCATATCGTCAGCTTCATCGGCGGGATAGACCTCTGCGACGGCCGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGACTTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGCGGGAGCCGTGGCACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAGCAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAGGCGGAGCTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTCCGGTCCATCGACGACGCGTCGGTCGTCGGGTTCCCCGCCGAGCCGGTGGCGGCGGCGGCGATGGGCCTGACGAACGGCAAGGACGTCACGATCGACCGGAGCATACAGGCCGGCTACGTCGAGGCCATCCGCCGGGCGCGGCGGTTCATCTACGTCGAGAACCAGTACTTCCTCGGCGGCTGCGCGTCGTGGGCCGAGGACCGCGACGCCGGCTGCCTCAACCTGGTGCCCGTCGAGATCGCGCTCAAGGTCGCCGCCAAGATCCGGCGGGGCGAGCGGTTCGCGGCGTACGTCGTGACGCCGATGTGGCCGGAGGGCGAGCCGGCCGGCGACTCCGTCCAGGCCATCCTCCGGTGGAACCGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGGCTGCGCGGCCAGGCGCACCCCTGCGACTACCTCAACTTCTTCTGCCTCGGGAACCGGGAGGCGCCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGCGCGCAGGTGAACCGCCGGTTCCCCATCTACGTGCACGCCAAGCTCATGATCGTGGACGACGAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGACAGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAACGGCGGCCCGAGCGGCCGCGCGCGCGGGCTCGTGCACGCGTTCCGGATGTCGCTGTGGCACGAGCACCTCATGGGCCACGCCGGCGGCGGCGGCGGCGTGTTCCTGGAGCCGGAGAGCGCGGAGTGCGTGCGCGCGGTGCGGCGAGCGGCGGAGGCGACGTGGGACGCGTACACGCGGGACACGATGGAGGACCTGCTGGGGCACCTGCTGCCGTTCCCGATCACCGTGTCCGAGTTCGGCGAGGTGGCCGACCTGACGGCCGACGGGTGCTTCCCGGACACGACGGCGCCGGTGAAGGGGAGGAGGTCGTTGAAGCTTCCCGCCATTCTGACCACGTGACGCCCTGAGCTTACCGTGCCGTGCCGCATGTACAAAACTTTGACGCAACGATCGTCTCTTCACGAAGCCGAACAAGTGTACATGTTGGATTGGATGTTGCCGAGTTTATATTGAGTGAATCCAAGATACGTCACTCGTGATAGCCACTGAGTGACACCAAAAAATAATCTAGTTTTTCTTTGAGTAAATTGTAGTGGTGGTACACAAACTTATTAGGTGGGTGCAATTTAATATACAAACTTATAAAATGTTTGTTTCAGTATACAAATTTGTC]

[+] EMBL AK120459             [GGCAGAGAAGGAAGGAAGCCAAACGGCATGGGCTCTCGTGGCGCCGCCGCCGACCATCTCCACGGCGTCCTCGAATTGACGGTGTACGAGGCCGACGACCTCCACAACGCCATCCATGGCCGGATCATCAAGGCGGCGGAGAGCTTGAAGGAGTCACTGGGCGTGCACCGTCTGGCACACAGGATCTACGTCGACGTCGATGTCGGCGCGGCGAGGGTGGCGCGCACCCGCGAGGTGGAGTTCCACCCGACCAACCCCGTCTGGAACCAGTCGTTCCGCCTCCACTGCGCCTACCCGGCGGC GCCCGTGGCGTTCACCGTCAAGAGCCAGCACCTCGTCGGCGCCGGCGTCCTCGGCGCCGCGCGCGTGCCAGCCGCGCGCGTCGCCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGCGGCGGTGAGCATGGCCACGCGACGCACACCCCGAAGCTCCGCGTCCGGCTGCGGTTCTTGGGCGTGGAGTCCGACCCGTGGTGGGACGCCGGCGTTCGCCTCCCCGGGTTCGCCGGCGTCACGCCGGCGTTCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGCTCGACCCGGGCGTCCGCCTCGCCGGCGGGGGGGCGTACCGGCCGGCGCGCCTGTGGGAGGACATGTACGTCGCCATCCGCGACGCGCGGCGGTTCGTGTACGTCGCCGGGTGGTCGGTGAACGCGGATATCACGCTGGTGCGCGACGCGTCCCGGATGGTCCCCGGCGCCGAGGGCGTCACGCTGGGCGAGCTGCTGCGGCGGAAGGCCGACGAGGGGGTGGCCGTACTGGTGATGCCGTGGCAGGACAAGACGTCCGTCTCCTTCCTCGGCAACGGGGGCCTCATGAGGACACACGACGAGGAGACGCGGCGCTTCTTCGAGGGCACCAACGTGCGCTGCTTCCTCTGCCCGCGCAACGCCGACGCGTCGCTCACCATGGTGCAGAGCATCGAGGTCGCAGCGGAGTTCACGCACCACCAGAAGACGGTCACCCTCGACGCCGCCGCCGCCTCGCCGGGCGACGCGGACGGCAGCCGTCGCCATATCGTCAGCTTCATCGGCGGGATAGACCTCTGCGACGGCCGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGACTTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGCGGGAGCCGTGGCACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAGCAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAGGCGGAGCTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTCCGGTCCATCGACGACGCGTCGGTCGTCGGGTTCCCCGCCGAGCCGGTGGCGGCGGCGGCGATGGGCCTGACGAACGGCAAGGACGTCACGATCGACCGGAGCATACAGGCCGGCTACGTCGAGGCCATCCGCCGGGCGCGGCGGTTCATCTACGTCGAGAACCAGTACTTCCTCGGCGGCTGCGCGTCGTGGGCCGAGGACCGCGACGCCGGCTGCCTCAACCTGGTGCCCGTCGAGATCGCGCTCAAGGTCGCCGCCAAGATCCGGCGGGGCGAGCGGTTCGCGGCGTACGTCGTGACGCCGATGTGGCCGGAGGGCGAGCCGGCCGGCGACTCCGTCCAGGCCATCCTCCGGTGGAACCGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGGCTGCGCGGCCAGGCGCACCCCTGCGACTACCTCAACTTCTTCTGCCTCGGGAACCGGGAGGCGCCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGCGCGCAGGTGAACCGCCGGTTCCCCATCTACGTGCACGCCAAGCTCATGATCGTGGACGACGAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGACAGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAACGGCGGCCCGAGCGGCCGCGCGCGCGGGCTCGTGCACGCGTTCCGGATGTCGCTGTGGCACGAGCACCTCATGGGCCACGCCGGCGGCGGCGGCGGCGTGTTCCTGGAGCCGGAGAGCGCGGAGTGCGTGCGCGCGGTGCGGCGAGCGGCGGAGGCGACGTGGGACGCGTACACGCGGGACACGATGGAGGACCTGCTGGGGCACCTGCTGCCGTTCCCGATCACCGTGTCCGAGTTCGGCGAGGTGGCCGACCTGACGGCCGACGGGTGCTTCCCGGACACGACGGCGCCGGTGAAGGGGAGGAGGTCGTTGAAGCTTCCCGCCATTCTGACCACGTGACGCCCTGAGCTTACCGTGCCGTGCCGCATGTACAAAACTTTGACGCAACGATCGTCTCTTCACGAAGCCGAACAAGTGTACATGTTGGATTGGATGTTGCCGAGTTTATATTGAGTGAATCCAAGATACGTCACTCGTGATAGCCACTGAGTGACACCAAAAAATAATCTAGTTTTTCTTTGAGTAAATTGTAGTGGTGGTACACAAACTTATTAGGTGGGTGCAATTTAATATACAAACTTATAAAATGT                       ]
[+] EMBL AK100975             [   AGAGAAGGAAGGAAGCCAAACGGCATGGGCTCTCGTGGCGCCGCCGCCGACCATCTCCACGGCGTCCTCGAACTGACGGTGTACGAGGCCGACGACCTCCACAACGCCATCCATGGCCGGATCATCAAGGCGGCGGAGAGCTTGAAGGAGTCACTGGGCGTGCACCGTCTGGCACACAGGATCTACGTCGACGTCGATGTCGGCGCGGCGAGGGTGGCGCGCACCCGCGAGGTGGAGTTCCACCCGACCAACCCCGTCTGGAACCAGTCGTTCCGCCTCCACTGCGCCTACCCGGCGGCGGCCCGTGGCGTTCACCGTCAAGAGCCAGCACCTCGTCGGCGCCGGCGTCCTCGGCGCCGCGCGCGTGCCAGCCGCGCGCGTCGCCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGCGGCGGTGAGCATGGCCACGCGACGCACACCCAGAAGCTCCGCGTCCGGCTGCGGTTCTTGGGCGTGGAGTCCGACCCGTGGTGGGACGCCGGCGTTCGCCTCCCCGGGTTCGCCGGCGTCACGCCGGCGTTCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGTTCGACCCGGGCGTCCGCCTCGCCGGCGGGGGGGCGTACCGGCCGGCGCGCCTGTGGGAGGACATGTACGTCGCCATCCGCGACGCGCGGCGGTTCGTGTACGTCGCCGGGTGGTCGGTGAACGCGGATATCACGCTGGTGCGCGACGCGTCCCGGATGGTCCCCGGCGCCGAGGGCGTCACGCTGGGCGAGCTGCTGCGGCGGAAGGCCGACGAGGGGGTGGCCGTGCTGGTGATGCCGTGGCAGGACAAGACGTCCGTCTCCTTCCTCGGCAACGGGGGCCTCATGAGGACACACGACGAGGAGACGCGGCGCTTCTTCGAGGGCACCAACGTGCGCTGCTTCCTCTGCCCGCGCAACGCCGACGCGTCGCTCACCATGGTGCAGAGCATCGAGGTCGCAGCGGAGTTCACGCACCACCAGAAGACGGTCACCCTCGACGCCGCCGCCGCCTCGCCGGGCGACGCGGACGGCAGCCGTCGCCATATCGTCAGCTTCATCGGCGGGATAGACCTCTGCGACGGCCGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGACTTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGCGGGAGCCGTGGCACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAGCAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAGGCGGAGCTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTCCGGTCCATCGACGACGCGTCGGTCGTCGGGTTCCCCGCCGAGCCGGTGGCGGCGGCGGCGATGGGCCTGACGAACGGCAAGGACGTCACGATCGACCGGAGCATACAGGCCGGCTACGTCGAGGCCATCCGCCGGGCGCGGCGGTTCATCTACGTCGAGAACCAGTACTTCCTCGGCGGCTGCGCGTCGTGGGCCGAGGACCGCGACGCCGGCTGCCTCAACCTGGTGCCCGTCGAGATCGCGCTCAAGGTCGCCGCCAAGATCCGGCGGGGCGAGCGGTTCGCGGCGTACGTCGTGACGCCGATGTGGCCGGAGGGCGAGCCGGCCGGCGACTCCGTCCAGGCCATCCTCCGGTGGAACCGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGGCTGCGCGGCCAGGCGCACCCCTGCGACTACCTCAACTTCTTCTGCCTCGGGAACCGGGAGGCGCCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGCGCGCAGGTGAACCGCCGGTTCCCCATCTACGTGCACGCCAAGCTCATGATCGTGGACGACGAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGACAGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAACGGCGGCCCGAGCGGCCGCGCGCGCGGGCTCGTGCACGCGTTCCGGATGTCGCTGTGGCACGAGCACCTCATGGGCCACGCCGGCGGCGGCGGCGGCGTGTTCCTGGAGCCGGAGAGCGCGGAGTGCGTGCGCGCGGTGCGGCGAGCGGCGGAGGCGACGTGGGACGCGTACACGCGGGACACGATGGAGGACCTGCTGGGGCACCTGCTGCCGTTCCCGATCACCGTGTCCGAGTTCGGCGAGGTGGCCGACCTGACGGCCGACGGGTGCTTCCCGGACACGACGGCGCCGGTGAAGGGGAGGAGGTCGTTGAAGCTTCCCGCCATTCTGACCACGTGACGCCCTGAGCTTACCGTGCCGTGCCGCATGTACAAAACTTTGACGCAACGATCGTCTCTTCACGAAGCCGAACAAGTGTACATGTTGGATTGGATGTTGCCGAGTTTATATTGAGTGAATCCAAGATACGTCACTCGTGATAGCCACTGAGTGACACCAAAAAATAATCTAGTTTTTCTTTGAGTAAATTGTAGTGGTGGTACACAAACTTATTAGGTGGGTGCAATTTAATATACAAACTTATAAAATGTTTGTTTCAGTATACAAATTTGTC]
[+] EMBL C72750               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGCGGGATAGACCTCTGCGACGGCCGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGACTTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGGGNGAGCCGTGGCACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAGCAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAGGCGGA NTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTCCGGTCCATCGACGACGCGTCGGTCGTCGGGTT CCCGCCGAGCCGGTTGCGGCGGCGGCGATGGGCCTAACGAACGGCAAGGACGTAACGATCGACCGGAG ATANAGGCCGG TACttg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU094063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCGATGTGGCCGGAGGGCGAGCCGGCCGGCGA TCCGTCCAGGCCATCCTCCGGTGGAACCGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGG TGCGCGGCCAGGCGCACCCCTGCGACTACNTCAACTTCTTCTGCCTCGGGAACCGGGAGGCGCCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGCGCGCAGGTGAACCGCCGGTTCCCNATCTACGTGCACGCCAAGCTCATGATCGTGGACGACGAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGACAGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAcac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_8028#0 GGCAGAGAAGGAAGGAAGCCAAACGGCATGGGCTCTCGTGGCGCCGCCGCCGACCATCTC CACGGCGTCCTCGAATTGACGGTGTACGAGGCCGACGACCTCCACAACGCCATCCATGGC CGGATCATCAAGGCGGCGGAGAGCTTGAAGGAGTCACTGGGCGTGCACCGTCTGGCACAC AGGATCTACGTCGACGTCGATGTCGGCGCGGCGAGGGTGGCGCGCACCCGCGAGGTGGAG TTCCACCCGACCAACCCCGTCTGGAACCAGTCGTTCCGCCTCCACTGCGCCTACCCGGCG GCGCCCGTGGCGTTCACCGTCAAGAGCCAGCACCTCGTCGGCGCCGGCGTCCTCGGCGCC GCGCGCGTGCCAGCCGCGCGCGTCGCCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTC CGCGGCGGTGAGCATGGCCACGCGACGCACACCCCGAAGCTCCGCGTCCGGCTGCGGTTC TTGGGCGTGGAGTCCGACCCGTGGTGGGACGCCGGCGTTCGCCTCCCCGGGTTCGCCGGC GTCACGCCGGCGTTCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCG CACCTGTCCGGCGGGCTCGACCCGGGCGTCCGCCTCGCCGGCGGGGGGGCGTACCGGCCG GCGCGCCTGTGGGAGGACATGTACGTCGCCATCCGCGACGCGCGGCGGTTCGTGTACGTC GCCGGGTGGTCGGTGAACGCGGATATCACGCTGGTGCGCGACGCGTCCCGGATGGTCCCC GGCGCCGAGGGCGTCACGCTGGGCGAGCTGCTGCGGCGGAAGGCCGACGAGGGGGTGGCC GTACTGGTGATGCCGTGGCAGGACAAGACGTCCGTCTCCTTCCTCGGCAACGGGGGCCTC ATGAGGACACACGACGAGGAGACGCGGCGCTTCTTCGAGGGCACCAACGTGCGCTGCTTC CTCTGCCCGCGCAACGCCGACGCGTCGCTCACCATGGTGCAGAGCATCGAGGTCGCAGCG GAGTTCACGCACCACCAGAAGACGGTCACCCTCGACGCCGCCGCCGCCTCGCCGGGCGAC GCGGACGGCAGCCGTCGCCATATCGTCAGCTTCATCGGCGGGATAGACCTCTGCGACGGC CGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGAC TTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGCGGGAGCCGTGG CACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAG CAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAG GCGGAGCTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTC CGGTCCATCGACGACGCGTCGGTCGTCGGGTTCCCCGCCGAGCCGGTGGCGGCGGCGGCG ATGGGCCTGACGAACGGCAAGGACGTCACGATCGACCGGAGCATACAGGCCGGCTACGTC GAGGCCATCCGCCGGGCGCGGCGGTTCATCTACGTCGAGAACCAGTACTTCCTCGGCGGC TGCGCGTCGTGGGCCGAGGACCGCGACGCCGGCTGCCTCAACCTGGTGCCCGTCGAGATC GCGCTCAAGGTCGCCGCCAAGATCCGGCGGGGCGAGCGGTTCGCGGCGTACGTCGTGACG CCGATGTGGCCGGAGGGCGAGCCGGCCGGCGACTCCGTCCAGGCCATCCTCCGGTGGAAC CGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGGCTG CGCGGCCAGGCGCACCCCTGCGACTACCTCAACTTCTTCTGCCTCGGGAACCGGGAGGCG CCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGC GCGCAGGTGAACCGCCGGTTCCCCATCTACGTGCACGCCAAGCTCATGATCGTGGACGAC GAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGAC AGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAACGGCGGCCCGAGCGGCCGC GCGCGCGGGCTCGTGCACGCGTTCCGGATGTCGCTGTGGCACGAGCACCTCATGGGCCAC GCCGGCGGCGGCGGCGGCGTGTTCCTGGAGCCGGAGAGCGCGGAGTGCGTGCGCGCGGTG CGGCGAGCGGCGGAGGCGACGTGGGACGCGTACACGCGGGACACGATGGAGGACCTGCTG GGGCACCTGCTGCCGTTCCCGATCACCGTGTCCGAGTTCGGCGAGGTGGCCGACCTGACG GCCGACGGGTGCTTCCCGGACACGACGGCGCCGGTGAAGGGGAGGAGGTCGTTGAAGCTT CCCGCCATTCTGACCACGTGACGCCCTGAGCTTACCGTGCCGTGCCGCATGTACAAAACT TTGACGCAACGATCGTCTCTTCACGAAGCCGAACAAGTGTACATGTTGGATTGGATGTTG CCGAGTTTATATTGAGTGAATCCAAGATACGTCACTCGTGATAGCCACTGAGTGACACCA AAAAATAATCTAGTTTTTCTTTGAGTAAATTGTAGTGGTGGTACACAAACTTATTAGGTG GGTGCAATTTAATATACAAACTTATAAAATGTTTGTTTCAGTATACAAATTTGTC



consensusID : consensus_8028#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 327
fasta sequence
                              [CAGNGNACCGCGTGGGCGCAGGCGTCNTCGGCGCGCGCGNNTGCAAGNCGCGGGTNCGCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGNGGCGGTGAGCATGGCNACGCGACGCACACCCCGAAGCTCCGCGTCNGGCTGCGGTTCTTGGGCGTGGAGTCCGACNCGTGGTGGGACGCCGGCGTTCGCTCCCCGGGTTCGCCGGCGTCACGCGGTNTNCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGTTCGACCCGGGCGTCCGCTCGCCGGCGGGGGGGCGTACCGGC]

[+] EMBL C93652               [CAGNGNACCGCGTGGGCGCAGGCGTCNTCGGCGCGCGCGNNTGCAAGNCGCGGGTNCGCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGNGGCGGTGAGCATGGCNACGCGACGCACACCCCGAAGCTCCGCGTCNGGCTGCGGTTCTTGGGCGTGGAGTCCGACNCGTGGTGGGACGCCGGCGTTCGCTCCCCGGGTTCGCCGGCGTCACGCGGTNTNCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGTTCGACCCGGGCGTCCGCTCGCCGGCGGGGGGGCGTACCGGC]


>consensus_8028#1 CAGNGNACCGCGTGGGCGCAGGCGTCNTCGGCGCGCGCGNNTGCAAGNCGCGGGTNCGCA CGGGTGAGCCCGTGGAGGGCTGGCTCGACCTCCGNGGCGGTGAGCATGGCNACGCGACGC ACACCCCGAAGCTCCGCGTCNGGCTGCGGTTCTTGGGCGTGGAGTCCGACNCGTGGTGGG ACGCCGGCGTTCGCTCCCCGGGTTCGCCGGCGTCACGCGGTNTNCTTCCCGGAGAGGAGC GGCTGCCGCGTGACGCTGTACCAGAACTCGCACCTGTCCGGCGGGTTCGACCCGGGCGTC CGCTCGCCGGCGGGGGGGCGTACCGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8028#0      GGCAGAGAAGGAAGGAAGCCAAACGGCATGGGCTCTCGTGGCGCCGCCGCCGACCATCTC 60
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CACGGCGTCCTCGAATTGACGGTGTACGAGGCCGACGACCTCCACAACGCCATCCATGGC 120
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGGATCATCAAGGCGGCGGAGAGCTTGAAGGAGTCACTGGGCGTGCACCGTCTGGCACAC 180
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      AGGATCTACGTCGACGTCGATGTCGGCGCGGCGAGGGTGGCGCGCACCCGCGAGGTGGAG 240
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      TTCCACCCGACCAACCCCGTCTGGAACCAGTCGTTCCGCCTCCACTGCGCCTACCCGGCG 300
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGCCCGTGGCGTTCACCGTCAAGAGCCAGCACCTCGTCGGCGCCGGCGTCCTCGGCGCC 360
consensus_8028#1      -------------------------CAGNGNACCGCGTGGGCGCAGGCGTCNTCGGCGC- 34
                                                   * *** *** ***** ****** ******* 

consensus_8028#0      GCGCGCGTGCCAGCCGCGCGCGTCGCCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTC 420
consensus_8028#1      GCGCGNNTGCAAGNCGCGG--GTNCGCACGGGTGAGCCCGTGGAGGGCTGGCTCGACCTC 92
                      *****  *** ** ****   **   **********************************

consensus_8028#0      CGCGGCGGTGAGCATGGCCACGCGACGCACACCCCGAAGCTCCGCGTCCGGCTGCGGTTC 480
consensus_8028#1      CGNGGCGGTGAGCATGGCNACGCGACGCACACCCCGAAGCTCCGCGTCNGGCTGCGGTTC 152
                      ** *************** ***************************** ***********

consensus_8028#0      TTGGGCGTGGAGTCCGACCCGTGGTGGGACGCCGGCGTTCGCCTCCCCGGGTTCGCCGGC 540
consensus_8028#1      TTGGGCGTGGAGTCCGACNCGTGGTGGGACGCCGGCGTTCGC-TCCCCGGGTTCGCCGGC 211
                      ****************** *********************** *****************

consensus_8028#0      GTCACGCCGGCGTTCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCG 600
consensus_8028#1      GTCACGC-GGTNTNCTTCCCGGAGAGGAGCGGCTGCCGCGTGACGCTGTACCAGAACTCG 270
                      ******* **  * **********************************************

consensus_8028#0      CACCTGTCCGGCGGGCTCGACCCGGGCGTCCGCCTCGCCGGCGGGGGGGCGTACCGGCCG 660
consensus_8028#1      CACCTGTCCGGCGGGTTCGACCCGGGCGTCCGC-TCGCCGGCGGGGGGGCGTACCGGC-- 327
                      *************** ***************** ************************  

consensus_8028#0      GCGCGCCTGTGGGAGGACATGTACGTCGCCATCCGCGACGCGCGGCGGTTCGTGTACGTC 720
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCCGGGTGGTCGGTGAACGCGGATATCACGCTGGTGCGCGACGCGTCCCGGATGGTCCCC 780
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GGCGCCGAGGGCGTCACGCTGGGCGAGCTGCTGCGGCGGAAGGCCGACGAGGGGGTGGCC 840
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GTACTGGTGATGCCGTGGCAGGACAAGACGTCCGTCTCCTTCCTCGGCAACGGGGGCCTC 900
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      ATGAGGACACACGACGAGGAGACGCGGCGCTTCTTCGAGGGCACCAACGTGCGCTGCTTC 960
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CTCTGCCCGCGCAACGCCGACGCGTCGCTCACCATGGTGCAGAGCATCGAGGTCGCAGCG 1020
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GAGTTCACGCACCACCAGAAGACGGTCACCCTCGACGCCGCCGCCGCCTCGCCGGGCGAC 1080
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGGACGGCAGCCGTCGCCATATCGTCAGCTTCATCGGCGGGATAGACCTCTGCGACGGC 1140
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGGTACGACGACGAGAACCACACGCTGTTCCGGGACCTCGACACCACGTACCGCCATGAC 1200
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      TTCATGCAGAACAACTTCAAGCACGCCGGCCTGCGGCGCGGCGGGCCGCGGGAGCCGTGG 1260
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CACGACGTCCACTGCAGGCTCGAGGGCCGCGCGGCGTGGGACGTGCTCGCCAACTTCGAG 1320
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CAGCGGTGGAGGAAGCAGGCGCCGCCGGAGATGGCCGGCTGTCTGCTCGACCTTAGCCAG 1380
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGGAGCTCCCTGACCCCGGCAGCTTCGGCGACGACGAGCCGTGGAACGTGCAGGTGTTC 1440
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGGTCCATCGACGACGCGTCGGTCGTCGGGTTCCCCGCCGAGCCGGTGGCGGCGGCGGCG 1500
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      ATGGGCCTGACGAACGGCAAGGACGTCACGATCGACCGGAGCATACAGGCCGGCTACGTC 1560
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GAGGCCATCCGCCGGGCGCGGCGGTTCATCTACGTCGAGAACCAGTACTTCCTCGGCGGC 1620
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      TGCGCGTCGTGGGCCGAGGACCGCGACGCCGGCTGCCTCAACCTGGTGCCCGTCGAGATC 1680
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGCTCAAGGTCGCCGCCAAGATCCGGCGGGGCGAGCGGTTCGCGGCGTACGTCGTGACG 1740
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CCGATGTGGCCGGAGGGCGAGCCGGCCGGCGACTCCGTCCAGGCCATCCTCCGGTGGAAC 1800
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGGCTCACCGTGGAGATGATGTACGGCATCGTCACGAAGGCCATCGACGACGCCGGGCTG 1860
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGCGGCCAGGCGCACCCCTGCGACTACCTCAACTTCTTCTGCCTCGGGAACCGGGAGGCG 1920
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CCGCGCCCCGGCGAGTACTCGCCGCCGGAGACGCCGGACGTTGACACGGACTACTGGCGC 1980
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGCAGGTGAACCGCCGGTTCCCCATCTACGTGCACGCCAAGCTCATGATCGTGGACGAC 2040
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GAGTACGTCATGGTCGGCTCGGCGAACCTCAACGAGCGGTCGCTGGCCGGCAACCGGGAC 2100
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      AGCGAGATCGCGCAGGGGAGCTACCAGCCGGCGCACCTGAACGGCGGCCCGAGCGGCCGC 2160
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCGCGCGGGCTCGTGCACGCGTTCCGGATGTCGCTGTGGCACGAGCACCTCATGGGCCAC 2220
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCCGGCGGCGGCGGCGGCGTGTTCCTGGAGCCGGAGAGCGCGGAGTGCGTGCGCGCGGTG 2280
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CGGCGAGCGGCGGAGGCGACGTGGGACGCGTACACGCGGGACACGATGGAGGACCTGCTG 2340
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GGGCACCTGCTGCCGTTCCCGATCACCGTGTCCGAGTTCGGCGAGGTGGCCGACCTGACG 2400
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GCCGACGGGTGCTTCCCGGACACGACGGCGCCGGTGAAGGGGAGGAGGTCGTTGAAGCTT 2460
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CCCGCCATTCTGACCACGTGACGCCCTGAGCTTACCGTGCCGTGCCGCATGTACAAAACT 2520
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      TTGACGCAACGATCGTCTCTTCACGAAGCCGAACAAGTGTACATGTTGGATTGGATGTTG 2580
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      CCGAGTTTATATTGAGTGAATCCAAGATACGTCACTCGTGATAGCCACTGAGTGACACCA 2640
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      AAAAATAATCTAGTTTTTCTTTGAGTAAATTGTAGTGGTGGTACACAAACTTATTAGGTG 2700
consensus_8028#1      ------------------------------------------------------------
                                                                                  

consensus_8028#0      GGTGCAATTTAATATACAAACTTATAAAATGTTTGTTTCAGTATACAAATTTGTC 2755
consensus_8028#1      -------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)