cluster # 8038

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Oryza sativa
cluster # 8038 cluster # 8038 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8038#0 length = 2208 sequences # 5
consensusID : consensus_8038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2208
fasta sequence
                              [ATATGTAATTTGTTGAGAAGGTCTTCTTCAAGTAGTAGAGTTTCAAAAGTTACCAACAAATCTTCTTTCGGTGGTTGTGCTCCTCTGAAGAATGGTGAATTCCAGAAGATGTTGGAAATGGAATCTCAAAAAACTATAGTCATAAACTATACTGATGTGGATATTCCTGTAATAGAAGAGACAAAACCTCTTATATGTGGAATCACTGAATTCGATGACGTTTTGAAGGAGCAAGAACTTTCCACTAAGGAGATTGCAATGTATGGGTTGTATCTTTGTCCCATATGGTTTGTGACGGAGTACTTGTCAAATGCGGCACTTGCAAGAACTAGTGTTGCTAGTACTACTGTACTATCTTCAACGTCAGGACTCTTCACTCTTTTCATTGGTGTGCTACTTGGCCAAGATTCTATAAATGCTGCAAAAGTTATTGCTGTTTTTATTAGCATGGCTGGTGTGGTAATGACAACCATGGGGCAGACTTGGGCATCAGATGAATCAGAAATCAGCAATTCTGGTGCCACTCAGAGAACTCTTCTAGGTGACATGTTTGGTCTTCTGTCAGCTATGTCATATGGTTTATTCACTGTGCTTCTAAAAAAGTTTGCTGGAGAGGAAGGAGAAAAGGTTGATGTCCAAAAACTGTTTGGCTACCTCGGACTTTTCAGTCTTGTTCTTCTCTGGTGGCTTGTCTGGCCATTGACCGCATTAGGCATTGAACCAAAGTTTACAATACCCCACTCAGCCAAAGTGGATGAAGTGGTGTTGGCAAATGGCCTTATTGGAAGTGTATTGTCAGACTACTTCTGGGCTCTTTCTGTTGTTTGGACTACTCCTTTGGTGGCCACCTTGGGCATGTCACTCACAATTCCACTAGCAATGGTGGCTGATATGATCATTCATGGTCGTCGTTATTCAGCGGTCTATATCTTTGGTTCTGTCCAGGTATTTTCTGGGTTTGTCATTGCAAATCTTGCGGATCGCTTTTCACGTTTTCTAGGGCTCTAGTGTCACGAAATCAACCAGGTTTTATTAGAGTGTACATCTGTGTGGATCGTTAGACAAATACCCTTGTTTCATAAGATTGCGAAAATGTTACTGTAGTTTTTTTTTTCTCTTGGCCCTTTACACA-CAGGAATGGAAAATTTTTGTGGCGGTGAAATAGAAAAGAGTGACTTGAAGAAACTTTATGCTGTAGCAACCCTTGCAACTGTAAATTCTTTTGCTATAAAATCCTTCTCAATGTATACTACTGTAGCTTCCTACAGTAGACTTGCATATATTAAAAAATATGTCTTTGTCCCCTTGACTCATTGTGGAACATTTACAAGTCCTGCAACCGAGAAGAAAGTACGTACAAAATGGCCTTTTGGAAAATAAAAGGTCAAAGGTGATTCTGGTGCCGTTACAAGCTTGGCTTTACTGTTACAGAGTGAAAGTCAACACCCGGCTGTAGTTATCGGCGTTGGATTGGAGACGATGGACGGCGAAGTTGTCCGGCGAAAAAGACGATAGACGGCGAAGTCGGCGGCCTGCTCGGGGTCGCGCAGCAGCGGCCTAGTGACCCTGTCTACCTCGACCACCTCGAAGCCTTGCTCTCGCAGCACGTCGATACAGTCCTGCACGCCGTCGCGCGCCTCGCTCGCCGCCCACCCCACCGTGCCGCCGCCGTCGCTGTCGCTGTCGCCGTCTCGCCATAGCCCATGCAGCGTGTCCGCCATCGCCGGCATGTCGTCCGGGTCGTAGAACACGTCGGACATGAGCACCACGTCCACCTGGACCTCGGGCTCGAGGTGCCCACCCCACCGGAGCTCACGCACGTCCGCCTGCTCGGCGGTGAGCCCGTTGGCGTCGGCGTTGGCCCTGAGGCCGGGGAGGAGCGGGCGCACGTCGGTGAGCACGCAGCGCGCGGCGCCGAGGCAGGCGACGGCGGCGATGCCCGGGAGGCCCGTGCCGGCGCCGAGCTCGAGGACGGTGGCGCCACGGAGGTGGTGGTGGTGGACGCAGGACGCGAGGTGGGAGGCGAGGACGAGGGAGGAGTCCCAGAGCCATGAGCCGGTGAGCGCGCGCCCCGTGGCCGGGTCGTGCGTGCCGTCGCGCTCAGCCACGGCCAGCGTGCGCCCGGCCACGGCTACGTGCAGCGCGGCGTCCATAATCTCGGTGGCTACCACCTCCATCATCTCCATGGCATTCTAACCTTCATATGCT]

[+] EMBL AK100006             [ATATGTAATTTGTTGAGAAGGTCTTCTTCAAGTAGTAGAGTTTCAAAAGTTACCAACAAATCTTCTTTCGGTGGTTGTGCTCCTCTGAAGAATGGTGAATTCCAGAAGATGTTGGAAATGGAATCTCAAAAAACTATAGTCATAAACTATACTGATGTGGATATTCCTGTAATAGAAGAGACAAAACCTCTTATATGTGGAATCACTGAATTCGATGACGTTTTGAAGGAGCAAGAACTTTCCACTAAGGAGATTGCAATGTATGGGTTGTATCTTTGTCCCATATGGTTTGTGACGGAGTACTTGTCAAATGCGGCACTTGCAAGAACTAGTGTTGCTAGTACTACTGTACTATCTTCAACGTCAGGACTCTTCACTCTTTTCATTGGTGTGCTACTTGGCCAAGATTCTATAAATGCTGCAAAAGTTATTGCTGTTTTTATTAGCATGGCTGGTGTGGTAATGACAACCATGGGGCAGACTTGGGCATCAGATGAATCAGAAATCAGCAATTCTGGTGCCACTCAGAGAACTCTTCTAGGTGACATGTTTGGTCTTCTGTCAGCTATGTCATATGGTTTATTCACTGTGCTTCTAAAAAAGTTTGCTGGAGAGGAAGGAGAAAAGGTTGATGTCCAAAAACTGTTTGGCTACCTCGGACTTTTCAGCCTTGTTCTTCTCTGGTGGCTTGTCTGGCCATTGACCGCATTAGGCATTGAACCAAAGTTTACAATACCCCACTCAGCCAAAGTGGATGAAGTGGTGTTGGCAAATGGCCTTATTGGAAGTGTATTGTCAGACTACTTCTGGGCTCTTTCTGTTGTTTGGACTACTCCTTTGGTGGCCACCTTGGGCATGTCACTCACAATTCCACTAGCAATGGTGGCTGATATGATCATTCATGGTCGTCGTTATTCAGCGGTCTATATCTTTGGTTCTGTCCAGGTATTTTCTGGGTTTGTCATTGCAAATCTTGCGGATCGCTTTTCACGTTTTCTAGGGCTCTAGTGTCACGAAATCAACCAGGTTTTATTAGAGTGTACATCTGTGTGGATCGTTAGACAAATACCCTTGTTTCATAAGATTGCGAAAATGTTACTGTAGTTTTTTTTTTCTCTTGGCCCTTTACACA CAGGAATGGAAAATTTTTGTGGCGGTGAAATAGAAAAGAGTGACTTGAAGAAACTTTATGCTGTAGCAACCCTTGCAACTGTAAATTCTTTTGCTATAAAATCCTTCTCAATGTATACTACTGTAGCTTCCTACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB685063             [                                                                                                                                                                                              TTATCTTTGGAATCACTGAATTCGATGACGTTTTGAAGGAGCAAGAACTTTCCACTAAGGAGATTGCAATGTATGGCTTGTATCTTTGTCCCATATGGTTTGTGACGGAGTACTTGTCAAATGCGGCACTTGCAAGAACTAGTGTTGCTAGTACTACTGTACTATCTTCAACGTCAGGACTCTTCACTCTTTTCATTGGTGTGCTACTTGGCCAAGATTCTATAAATGCTGCAAAAGTTATTGCTGTTTTTATTAGCATGGCTGGTGTGGTAATGACAACCATGGGGCAGACTTGGGCATCAGATGAATCAGAAATCAGCAATTCTGGTGCCACTCAGAGAACTCTTCTAGGTGACATGTTTGGTCTTCTGTCAGCTATGTCATATGGTTTATTCACTGTGCTTCTAAAAAAGTTTGCTGGAGAGGAAGGAGAAAAGGTTGATGTCCAAAAACTGTTTGGCTACCTCGGACTTTTCAGTCTTGTTCTTCTCTGGTGGCTTGTCTGGCCATTGACCGCATTAGGCATTGAACCAAAGTTTACAATACCCCACTCAGCCAAAGTGGATGAAGTGGTGTTGGCAAATGGCCTTATTGGAAGTGTATTGTCAGACTACTTCTGGGCTCTTTCTGTTGTTTGGACTACTCCTTTGGTGGCCACCTTGGGCATGTCACTCACAATTCCACTAGCAATGGTGGCTGATATGATCATTCATGGTCGTCGTTATTCAGCGGGCTATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB685064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTGCTTCTAAAAAAGTTTGGTGGAGAGGAAGGAGAAAAGGTTGATGTCCAAAAACTGTTTGGCTACCTCGGACTTTTCAGTCTTGTTCTTCTCTGGTGGCTTGTCTGGCCATTGACCGCATTAGGCATTGAACCAAAGTTTACAATACCCCACTCAGCCAAAGTGGATGAAGTGGTGTTGGCAAATGGCCTTATTGGAAGTGTATTGTCAGACTACTTCTGGGCTCTTTCTGTTGTTTGGACTACTCCTTTGGTGGCCACCTTGGGCATGTCACTCACAATTCCACTAGCAATGGTGGCTGATATGATCATTCATGGTCGTCGTTATTCAGCGGTCTATATCTTTGGTTCTGTCCAGGTATTTTTTGGGTTTGTCATTGCAAATCTTGCGGATCGCTTTTCACGTTTTCTAGGGCTATAGTGTCACGAAATCAACCAGGTTTTATTAGAGTGTACATCTGTGTGGATCGTTAGACAAATACCCTTGTTTCATAAGATTGCGAAAATGTTACTGTAGTTTTTTTTTTCTCTTGGCCCTTTACACA CAGGAATGGAAAATTTTTGTGGCGGTGAAATAGAAAAGAGTGACTTGAAGAAACTTTATGCTGTAGCAACCCTTGCAACTGTAAATTCTTTTGCTATAAAATCCTTCTCAATGTATACAAGTGTAGCTTCCTACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI805145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATATCTTTGGTTCTGTCCAGGTATTTTCTGGGTTTGTCATTGCAAATCTTGCGGATCGCTTTTCACGTTTTCTAGGGCTCTAGTGTCACGAAATCAACCAGGTTTTATTAGAGTGTACATCTGTGTGGATCGTTAGACAAATACCCTTGTTTCATAAGATTGCGAAAATGTTACTGTAGTTTTTTTTTTCTCTTGGCCCTTTACACACCAGGAATGGAAAATTTTTGTGGCGGTGAAATAGAAAAGAGTGACTTGAAGAAACTTTATGCTGTAGC ACCCTTGCAACTGTAAATTCTTTTGCTATAAAATCCTTCTCAATGTATACTACTGTAGCTTCCTACAGTAGACTTGCATATATTAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AK062761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTTCTCAATGTATACTACTGTAGCTTCCTACAGTAGACTTGCATATATTAATTGCTATGTCTTTGTCCCCTTGACTCATTGTGGAACATTTACAAGTCCTGCAACCGAGAAGAAAGTACGTACAAAATGGCCTTTTGGAAAATAAAAGGTCAAAGGTGATTCTGGTGCCGTTACAAGCTTGGCTTTACTGTTACAGAGTGAAAGTCAACACCCGGCTGTAGTTATCGGCGTTGGATTGGAGACGATGGACGGCGAAGTTGTCCGGCGAAAAAGACGATAGACGGCGAAGTCGGCGGCCTGCTCGGGGTCGCGCAGCAGCGGCCTAGTGACCCTGTCTACCTCGACCACCTCGAAGCCTTGCTCTCGCAGCACGTCGATACAGTCCTGCACGCCGTCGCGCGCCTCGCTCGCCGCCCACCCCACCGTGCCGCCGCCGTCGCTGTCGCTGTCGCCGTCTCGCCATAGCCCATGCAGCGTGTCCGCCATCGCCGGCATGTCGTCCGGGTCGTAGAACACGTCGGACATGAGCACCACGTCCACCTGGACCTCGGGCTCGAGGTGCCCACCCCACCGGAGCTCACGCACGTCCGCCTGCTCGGCGGTGAGCCCGTTGGCGTCGGCGTTGGCCCTGAGGCCGGGGAGGAGCGGGCGCACGTCGGTGAGCACGCAGCGCGCGGCGCCGAGGCAGGCGACGGCGGCGATGCCCGGGAGGCCCGTGCCGGCGCCGAGCTCGAGGACGGTGGCGCCACGGAGGTGGTGGTGGTGGACGCAGGACGCGAGGTGGGAGGCGAGGACGAGGGAGGAGTCCCAGAGCCATGAGCCGGTGAGCGCGCGCCCCGTGGCCGGGTCGTGCGTGCCGTCGCGCTCAGCCACGGCCAGCGTGCGCCCGGCCACGGCTACGTGCAGCGCGGCGTCCATAATCTCGGTGGCTACCACCTCCATCATCTCCATGGCATTCTAACCTTCATATGCT]




>consensus_8038#0
ATATGTAATTTGTTGAGAAGGTCTTCTTCAAGTAGTAGAGTTTCAAAAGTTACCAACAAA
TCTTCTTTCGGTGGTTGTGCTCCTCTGAAGAATGGTGAATTCCAGAAGATGTTGGAAATG
GAATCTCAAAAAACTATAGTCATAAACTATACTGATGTGGATATTCCTGTAATAGAAGAG
ACAAAACCTCTTATATGTGGAATCACTGAATTCGATGACGTTTTGAAGGAGCAAGAACTT
TCCACTAAGGAGATTGCAATGTATGGGTTGTATCTTTGTCCCATATGGTTTGTGACGGAG
TACTTGTCAAATGCGGCACTTGCAAGAACTAGTGTTGCTAGTACTACTGTACTATCTTCA
ACGTCAGGACTCTTCACTCTTTTCATTGGTGTGCTACTTGGCCAAGATTCTATAAATGCT
GCAAAAGTTATTGCTGTTTTTATTAGCATGGCTGGTGTGGTAATGACAACCATGGGGCAG
ACTTGGGCATCAGATGAATCAGAAATCAGCAATTCTGGTGCCACTCAGAGAACTCTTCTA
GGTGACATGTTTGGTCTTCTGTCAGCTATGTCATATGGTTTATTCACTGTGCTTCTAAAA
AAGTTTGCTGGAGAGGAAGGAGAAAAGGTTGATGTCCAAAAACTGTTTGGCTACCTCGGA
CTTTTCAGTCTTGTTCTTCTCTGGTGGCTTGTCTGGCCATTGACCGCATTAGGCATTGAA
CCAAAGTTTACAATACCCCACTCAGCCAAAGTGGATGAAGTGGTGTTGGCAAATGGCCTT
ATTGGAAGTGTATTGTCAGACTACTTCTGGGCTCTTTCTGTTGTTTGGACTACTCCTTTG
GTGGCCACCTTGGGCATGTCACTCACAATTCCACTAGCAATGGTGGCTGATATGATCATT
CATGGTCGTCGTTATTCAGCGGTCTATATCTTTGGTTCTGTCCAGGTATTTTCTGGGTTT
GTCATTGCAAATCTTGCGGATCGCTTTTCACGTTTTCTAGGGCTCTAGTGTCACGAAATC
AACCAGGTTTTATTAGAGTGTACATCTGTGTGGATCGTTAGACAAATACCCTTGTTTCAT
AAGATTGCGAAAATGTTACTGTAGTTTTTTTTTTCTCTTGGCCCTTTACACACAGGAATG
GAAAATTTTTGTGGCGGTGAAATAGAAAAGAGTGACTTGAAGAAACTTTATGCTGTAGCA
ACCCTTGCAACTGTAAATTCTTTTGCTATAAAATCCTTCTCAATGTATACTACTGTAGCT
TCCTACAGTAGACTTGCATATATTAAAAAATATGTCTTTGTCCCCTTGACTCATTGTGGA
ACATTTACAAGTCCTGCAACCGAGAAGAAAGTACGTACAAAATGGCCTTTTGGAAAATAA
AAGGTCAAAGGTGATTCTGGTGCCGTTACAAGCTTGGCTTTACTGTTACAGAGTGAAAGT
CAACACCCGGCTGTAGTTATCGGCGTTGGATTGGAGACGATGGACGGCGAAGTTGTCCGG
CGAAAAAGACGATAGACGGCGAAGTCGGCGGCCTGCTCGGGGTCGCGCAGCAGCGGCCTA
GTGACCCTGTCTACCTCGACCACCTCGAAGCCTTGCTCTCGCAGCACGTCGATACAGTCC
TGCACGCCGTCGCGCGCCTCGCTCGCCGCCCACCCCACCGTGCCGCCGCCGTCGCTGTCG
CTGTCGCCGTCTCGCCATAGCCCATGCAGCGTGTCCGCCATCGCCGGCATGTCGTCCGGG
TCGTAGAACACGTCGGACATGAGCACCACGTCCACCTGGACCTCGGGCTCGAGGTGCCCA
CCCCACCGGAGCTCACGCACGTCCGCCTGCTCGGCGGTGAGCCCGTTGGCGTCGGCGTTG
GCCCTGAGGCCGGGGAGGAGCGGGCGCACGTCGGTGAGCACGCAGCGCGCGGCGCCGAGG
CAGGCGACGGCGGCGATGCCCGGGAGGCCCGTGCCGGCGCCGAGCTCGAGGACGGTGGCG
CCACGGAGGTGGTGGTGGTGGACGCAGGACGCGAGGTGGGAGGCGAGGACGAGGGAGGAG
TCCCAGAGCCATGAGCCGGTGAGCGCGCGCCCCGTGGCCGGGTCGTGCGTGCCGTCGCGC
TCAGCCACGGCCAGCGTGCGCCCGGCCACGGCTACGTGCAGCGCGGCGTCCATAATCTCG
GTGGCTACCACCTCCATCATCTCCATGGCATTCTAACCTTCATATGCT
clustalw multiple alignements is not computed in this case